RNA–Protein interactions for RNA: ENST00000375835.8

SHC3-202, Transcript of SHC adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHC3, Length 9,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3-202ENST00000375835 H3BQV1 296 aa22.06■■□□□ 1.12
SHC3-202ENST00000375835 IFFO2Q5TF58 517 aa22.06■■□□□ 1.12
SHC3-202ENST00000375835 CCP110O43303 1012 aa22.04■■□□□ 1.12
SHC3-202ENST00000375835 CCDC39Q9UFE4 941 aa22.04■■□□□ 1.12
SHC3-202ENST00000375835 ZBED9Q6R2W3 1325 aa22.04■■□□□ 1.12
SHC3-202ENST00000375835 LRRFIP1Q32MZ4 808 aaKnown RBP22.03■■□□□ 1.12
SHC3-202ENST00000375835 CCAR2Q8N163 923 aaKnown RBP22.03■■□□□ 1.12
SHC3-202ENST00000375835 ERCC4Q92889 916 aaPredicted RBP22.03■■□□□ 1.12
SHC3-202ENST00000375835 MYO6Q9UM54 1294 aa22.03■■□□□ 1.12
SHC3-202ENST00000375835 REC8O95072 547 aa22.03■■□□□ 1.12
SHC3-202ENST00000375835 ROCK1Q13464 1354 aa22.03■■□□□ 1.12
SHC3-202ENST00000375835 SF3A1Q15459 793 aaKnown RBP22.03■■□□□ 1.12
SHC3-202ENST00000375835 STK31Q9BXU1 1019 aa22.03■■□□□ 1.12
SHC3-202ENST00000375835 AAMPQ13685 434 aa22.03■■□□□ 1.12
SHC3-202ENST00000375835 HMGN5P82970 282 aaKnown RBP22.02■■□□□ 1.12
SHC3-202ENST00000375835 FAM13BQ9NYF5 915 aa22.02■■□□□ 1.11
SHC3-202ENST00000375835 NAT10Q9H0A0 1025 aaKnown RBP22.01■■□□□ 1.11
SHC3-202ENST00000375835 PKNOX2Q96KN3 472 aa22■■□□□ 1.11
SHC3-202ENST00000375835 HDGFL2Q7Z4V5 671 aaPredicted RBP22■■□□□ 1.11
SHC3-202ENST00000375835 PRM3Q9NNZ6 103 aa21.99■■□□□ 1.11
SHC3-202ENST00000375835 SMC4Q9NTJ3 1288 aa21.98■■□□□ 1.11
SHC3-202ENST00000375835 EIF4G1Q04637 1599 aaKnown RBP21.98■■□□□ 1.11
SHC3-202ENST00000375835 ISY1Q9ULR0 285 aaKnown RBP21.97■■□□□ 1.11
SHC3-202ENST00000375835 NLRP13Q86W25 1043 aa21.97■■□□□ 1.11
SHC3-202ENST00000375835 FMN1Q68DA7 1419 aa21.97■■□□□ 1.11
SHC3-202ENST00000375835 DCAF11Q8TEB1 546 aa21.97■■□□□ 1.11
SHC3-202ENST00000375835 CGNL1Q0VF96 1302 aa21.96■■□□□ 1.11
SHC3-202ENST00000375835 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
SHC3-202ENST00000375835 LETM1O95202 739 aaPredicted RBP21.95■■□□□ 1.11
SHC3-202ENST00000375835 HOMER1Q86YM7 354 aa21.95■■□□□ 1.1
SHC3-202ENST00000375835 NGEFQ8N5V2 710 aa21.94■■□□□ 1.1
SHC3-202ENST00000375835 KAT6BQ8WYB5 2073 aa21.94■■□□□ 1.1
SHC3-202ENST00000375835 GORABQ5T7V8 394 aa21.93■■□□□ 1.1
SHC3-202ENST00000375835 NUCB2P80303 420 aa21.93■■□□□ 1.1
SHC3-202ENST00000375835 H0YHG0 523 aa21.92■■□□□ 1.1
SHC3-202ENST00000375835 KIF7Q2M1P5 1343 aa21.92■■□□□ 1.1
SHC3-202ENST00000375835 HSPA5P11021 654 aaKnown RBP21.92■■□□□ 1.1
SHC3-202ENST00000375835 ZNF592Q92610 1267 aa21.92■■□□□ 1.1
SHC3-202ENST00000375835 LEKR1Q6ZMV7 388 aa21.91■■□□□ 1.1
SHC3-202ENST00000375835 PES1O00541 588 aaKnown RBP21.91■■□□□ 1.1
SHC3-202ENST00000375835 MRE11P49959 708 aa21.91■■□□□ 1.1
SHC3-202ENST00000375835 SRPK2P78362 688 aaKnown RBP21.91■■□□□ 1.1
SHC3-202ENST00000375835 MNS1Q8NEH6 495 aa21.91■■□□□ 1.1
SHC3-202ENST00000375835 PDE4AP27815 886 aa21.91■■□□□ 1.1
SHC3-202ENST00000375835 USP8P40818 1118 aa21.9■■□□□ 1.1
SHC3-202ENST00000375835 FAM184AQ8NB25 1140 aa21.9■■□□□ 1.1
SHC3-202ENST00000375835 SIN3AQ96ST3 1273 aa21.89■■□□□ 1.1
SHC3-202ENST00000375835 RUFY2Q8WXA3 655 aa21.89■■□□□ 1.1
SHC3-202ENST00000375835 CCDC47Q96A33 483 aaKnown RBP21.89■■□□□ 1.1
SHC3-202ENST00000375835 NASPP49321 788 aaPredicted RBP21.89■■□□□ 1.09
SHC3-202ENST00000375835 UACAQ9BZF9 1416 aa21.89■■□□□ 1.09
SHC3-202ENST00000375835 CREBRFQ8IUR6 639 aa21.89■■□□□ 1.09
SHC3-202ENST00000375835 MYBBP1AQ9BQG0 1328 aaKnown RBP21.88■■□□□ 1.09
SHC3-202ENST00000375835 ZRSR2Q15696 482 aaKnown RBP21.88■■□□□ 1.09
SHC3-202ENST00000375835 NCBP3Q53F19 620 aaKnown RBP21.88■■□□□ 1.09
SHC3-202ENST00000375835 RRP9O43818 475 aaKnown RBP21.88■■□□□ 1.09
SHC3-202ENST00000375835 CAVIN1Q6NZI2 390 aaKnown RBP21.88■■□□□ 1.09
SHC3-202ENST00000375835 CAGE1Q8TC20 777 aa21.88■■□□□ 1.09
SHC3-202ENST00000375835 PATL2C9JE40 543 aaKnown RBP21.87■■□□□ 1.09
SHC3-202ENST00000375835 TMX4Q9H1E5 349 aaPredicted RBP21.87■■□□□ 1.09
SHC3-202ENST00000375835 CHMP5Q9NZZ3 219 aa21.87■■□□□ 1.09
SHC3-202ENST00000375835 INCENPQ9NQS7 918 aa21.87■■□□□ 1.09
SHC3-202ENST00000375835 APBB1O00213 710 aa21.87■■□□□ 1.09
SHC3-202ENST00000375835 CCDC173Q0VFZ6 552 aa21.86■■□□□ 1.09
SHC3-202ENST00000375835 GOLGA6L7A0A1B0GV03 622 aa21.86■■□□□ 1.09
SHC3-202ENST00000375835 TSPYL1Q9H0U9 437 aa21.86■■□□□ 1.09
SHC3-202ENST00000375835 AKAP17AQ02040 695 aaKnown RBP21.85■■□□□ 1.09
SHC3-202ENST00000375835 CCDC18Q5T9S5 1454 aa21.85■■□□□ 1.09
SHC3-202ENST00000375835 U2AF1L5P0DN76 240 aaPredicted RBP21.85■■□□□ 1.09
SHC3-202ENST00000375835 U2AF1Q01081 240 aaKnown RBP eCLIP21.85■■□□□ 1.09
SHC3-202ENST00000375835 RAB3GAP2Q9H2M9 1393 aa21.85■■□□□ 1.09
SHC3-202ENST00000375835 IFT57Q9NWB7 429 aa21.85■■□□□ 1.09
SHC3-202ENST00000375835 SENP3-EIF4A1A0A087X0R7 540 aa21.84■■□□□ 1.09
SHC3-202ENST00000375835 CPLX2Q6PUV4 134 aaKnown RBP21.83■■□□□ 1.09
SHC3-202ENST00000375835 TERF2IPQ9NYB0 399 aa21.82■■□□□ 1.08
SHC3-202ENST00000375835 SASS6Q6UVJ0 657 aa21.82■■□□□ 1.08
SHC3-202ENST00000375835 ZKSCAN1P17029 563 aaPredicted RBP21.82■■□□□ 1.08
SHC3-202ENST00000375835 E9PSI1 815 aa21.81■■□□□ 1.08
SHC3-202ENST00000375835 RRP1P56182 461 aaKnown RBP21.81■■□□□ 1.08
SHC3-202ENST00000375835 TRIM29Q14134 588 aa21.81■■□□□ 1.08
SHC3-202ENST00000375835 RNF20Q5VTR2 975 aa21.8■■□□□ 1.08
SHC3-202ENST00000375835 ANKRD30AQ9BXX3 1397 aa21.8■■□□□ 1.08
SHC3-202ENST00000375835 CUX1P39880 1505 aa21.79■■□□□ 1.08
SHC3-202ENST00000375835 NEXNQ0ZGT2 675 aa21.79■■□□□ 1.08
SHC3-202ENST00000375835 TXLNBQ8N3L3 684 aa21.77■■□□□ 1.08
SHC3-202ENST00000375835 PRDM2Q13029 1718 aa21.77■■□□□ 1.08
SHC3-202ENST00000375835 SYNE3Q6ZMZ3 975 aa21.77■■□□□ 1.08
SHC3-202ENST00000375835 TAF7LQ5H9L4 462 aa21.77■■□□□ 1.08
SHC3-202ENST00000375835 KIAA0754O94854 1291 aa21.77■■□□□ 1.08
SHC3-202ENST00000375835 MBD3O95983 291 aa21.77■■□□□ 1.08
SHC3-202ENST00000375835 SMARCA2P51531 1590 aa21.76■■□□□ 1.07
SHC3-202ENST00000375835 MARCH6O60337 910 aa21.76■■□□□ 1.07
SHC3-202ENST00000375835 DDX19BQ9UMR2 479 aa21.75■■□□□ 1.07
SHC3-202ENST00000375835 GOLGA6L10A6NI86 522 aa21.75■■□□□ 1.07
SHC3-202ENST00000375835 IQCEQ6IPM2 695 aa21.73■■□□□ 1.07
SHC3-202ENST00000375835 PCMTD1Q96MG8 357 aaPredicted RBP21.73■■□□□ 1.07
SHC3-202ENST00000375835 KCNH8Q96L42 1107 aa21.73■■□□□ 1.07
SHC3-202ENST00000375835 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.73■■□□□ 1.07
SHC3-202ENST00000375835 CCDC73Q6ZRK6 1079 aa21.73■■□□□ 1.07
SHC3-202ENST00000375835 FOXD4L1Q9NU39 408 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms