RNA–Protein interactions for RNA: ENST00000374257.5

PTBP3-205, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PTBP3, Length 7,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-205ENST00000374257 ARHGEF11O15085 1522 aa10.94□□□□□ -0.66
PTBP3-205ENST00000374257 FANCAO15360 1455 aa10.93□□□□□ -0.66
PTBP3-205ENST00000374257 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.93□□□□□ -0.665e-7■■□□□ 13.5
PTBP3-205ENST00000374257 SLC26A8Q96RN1 970 aa10.93□□□□□ -0.66
PTBP3-205ENST00000374257 LAS1LQ9Y4W2 734 aaKnown RBP10.93□□□□□ -0.66
PTBP3-205ENST00000374257 CDK13Q14004 1512 aaKnown RBP10.92□□□□□ -0.66
PTBP3-205ENST00000374257 KIF21AQ7Z4S6 1674 aa10.92□□□□□ -0.66
PTBP3-205ENST00000374257 EIF4G3O43432 1585 aaKnown RBP10.92□□□□□ -0.66
PTBP3-205ENST00000374257 LTV1Q96GA3 475 aaPredicted RBP10.91□□□□□ -0.66
PTBP3-205ENST00000374257 NUP160Q12769 1436 aa10.91□□□□□ -0.66
PTBP3-205ENST00000374257 MYH16Q9H6N6 1097 aa10.91□□□□□ -0.66
PTBP3-205ENST00000374257 HSPA5P11021 654 aaKnown RBP10.9□□□□□ -0.66
PTBP3-205ENST00000374257 COG3Q96JB2 828 aa10.9□□□□□ -0.66
PTBP3-205ENST00000374257 GPRASP1Q5JY77 1395 aa10.9□□□□□ -0.66
PTBP3-205ENST00000374257 WDR7Q9Y4E6 1490 aa10.9□□□□□ -0.66
PTBP3-205ENST00000374257 ESCO1Q5FWF5 840 aa10.9□□□□□ -0.67
PTBP3-205ENST00000374257 BIVM-ERCC5R4GMW8 1640 aa10.89□□□□□ -0.67
PTBP3-205ENST00000374257 CCDC141Q6ZP82 1450 aa10.89□□□□□ -0.67
PTBP3-205ENST00000374257 CHMP4AQ9BY43 222 aa10.88□□□□□ -0.67
PTBP3-205ENST00000374257 CENPJQ9HC77 1338 aaPredicted RBP10.88□□□□□ -0.67
PTBP3-205ENST00000374257 RPGRIP1LQ68CZ1 1315 aa10.87□□□□□ -0.67
PTBP3-205ENST00000374257 ADAMTS12P58397 1594 aa10.87□□□□□ -0.67
PTBP3-205ENST00000374257 ABCC2Q92887 1545 aa10.87□□□□□ -0.67
PTBP3-205ENST00000374257 ZNF330Q9Y3S2 320 aaPredicted RBP10.86□□□□□ -0.67
PTBP3-205ENST00000374257 U2AF1L5P0DN76 240 aaPredicted RBP10.86□□□□□ -0.67
PTBP3-205ENST00000374257 U2AF1Q01081 240 aaKnown RBP eCLIP10.86□□□□□ -0.67
PTBP3-205ENST00000374257 TMX4Q9H1E5 349 aaPredicted RBP10.86□□□□□ -0.67
PTBP3-205ENST00000374257 HFM1A2PYH4 1435 aa10.86□□□□□ -0.67
PTBP3-205ENST00000374257 NUTM2BA6NNL0 878 aaPredicted RBP10.85□□□□□ -0.67
PTBP3-205ENST00000374257 NUTM2EB1AL46 878 aaPredicted RBP10.85□□□□□ -0.67
PTBP3-205ENST00000374257 TMEM132EQ6IEE7 984 aa10.85□□□□□ -0.67
PTBP3-205ENST00000374257 NUTM2AQ8IVF1 878 aaPredicted RBP10.85□□□□□ -0.67
PTBP3-205ENST00000374257 RRBP1Q9P2E9 1410 aaKnown RBP10.85□□□□□ -0.67
PTBP3-205ENST00000374257 SF3B2Q13435 895 aaKnown RBP10.85□□□□□ -0.67
PTBP3-205ENST00000374257 KIF14Q15058 1648 aa10.84□□□□□ -0.67
PTBP3-205ENST00000374257 ATP10BO94823 1461 aa10.84□□□□□ -0.67
PTBP3-205ENST00000374257 PLCH2O75038 1416 aa10.84□□□□□ -0.67
PTBP3-205ENST00000374257 TOM1O60784 492 aa10.84□□□□□ -0.67
PTBP3-205ENST00000374257 KTN1Q86UP2 1357 aaKnown RBP10.84□□□□□ -0.67
PTBP3-205ENST00000374257 ST20-MTHFSA0A0A6YYL1 179 aa10.83□□□□□ -0.68
PTBP3-205ENST00000374257 FBXO31Q5XUX0 539 aaPredicted RBP10.83□□□□□ -0.68
PTBP3-205ENST00000374257 DCAF8L1A6NGE4 600 aa10.83□□□□□ -0.68
PTBP3-205ENST00000374257 UBAP1LF5GYI3 381 aa10.83□□□□□ -0.68
PTBP3-205ENST00000374257 CALD1Q05682 793 aaKnown RBP10.83□□□□□ -0.68
PTBP3-205ENST00000374257 DHX29Q7Z478 1369 aaKnown RBP10.83□□□□□ -0.68
PTBP3-205ENST00000374257 NLRP6P59044 892 aa10.82□□□□□ -0.68
PTBP3-205ENST00000374257 CFAP70Q5T0N1 1121 aa10.82□□□□□ -0.68
PTBP3-205ENST00000374257 CGNL1Q0VF96 1302 aa10.82□□□□□ -0.68
PTBP3-205ENST00000374257 MSH5O43196 834 aa10.82□□□□□ -0.68
PTBP3-205ENST00000374257 TNRQ92752 1358 aa10.81□□□□□ -0.68
PTBP3-205ENST00000374257 DAPK1P53355 1430 aa10.81□□□□□ -0.68
PTBP3-205ENST00000374257 NLRP2Q9NX02 1062 aa10.8□□□□□ -0.68
PTBP3-205ENST00000374257 ANKRD30BQ9BXX2 1392 aa10.8□□□□□ -0.68
PTBP3-205ENST00000374257 HSPA2P54652 639 aa10.8□□□□□ -0.68
PTBP3-205ENST00000374257 C1orf141Q5JVX7 400 aa10.8□□□□□ -0.68
PTBP3-205ENST00000374257 WDR97A6NE52 1622 aa10.8□□□□□ -0.68
PTBP3-205ENST00000374257 UGGT2Q9NYU1 1516 aa10.79□□□□□ -0.68
PTBP3-205ENST00000374257 RAPGEF4Q8WZA2 1011 aa10.79□□□□□ -0.68
PTBP3-205ENST00000374257 PRAM1Q96QH2 718 aa10.79□□□□□ -0.68
PTBP3-205ENST00000374257 ZNF518AQ6AHZ1 1483 aa10.79□□□□□ -0.68
PTBP3-205ENST00000374257 ABTB2Q8N961 1025 aa10.78□□□□□ -0.68
PTBP3-205ENST00000374257 GTF2E1P29083 439 aaPredicted RBP10.78□□□□□ -0.68
PTBP3-205ENST00000374257 SYTL4Q96C24 671 aaPredicted RBP10.78□□□□□ -0.68
PTBP3-205ENST00000374257 CEP170Q5SW79 1584 aa10.78□□□□□ -0.68
PTBP3-205ENST00000374257 RALBP1Q15311 655 aa10.78□□□□□ -0.68
PTBP3-205ENST00000374257 GOLGA2Q08379 1002 aa10.78□□□□□ -0.68
PTBP3-205ENST00000374257 IDI1Q13907 227 aa10.78□□□□□ -0.68
PTBP3-205ENST00000374257 CHMP4BQ9H444 224 aaKnown RBP10.77□□□□□ -0.68
PTBP3-205ENST00000374257 TIAM1Q13009 1591 aa10.77□□□□□ -0.69
PTBP3-205ENST00000374257 PMFBP1Q8TBY8 1022 aa10.77□□□□□ -0.69
PTBP3-205ENST00000374257 PRDM11Q9NQV5 511 aa10.77□□□□□ -0.69
PTBP3-205ENST00000374257 LMOD3Q0VAK6 560 aa10.77□□□□□ -0.69
PTBP3-205ENST00000374257 NUTM2GQ5VZR2 741 aa10.77□□□□□ -0.69
PTBP3-205ENST00000374257 CADPS2Q86UW7 1296 aa10.77□□□□□ -0.69
PTBP3-205ENST00000374257 NLRP13Q86W25 1043 aa10.77□□□□□ -0.69
PTBP3-205ENST00000374257 FTSJ3Q8IY81 847 aaKnown RBP10.77□□□□□ -0.69
PTBP3-205ENST00000374257 CAMSAP2Q08AD1 1489 aa10.77□□□□□ -0.69
PTBP3-205ENST00000374257 USP35Q9P2H5 1018 aa10.76□□□□□ -0.69
PTBP3-205ENST00000374257 ABCC10Q5T3U5 1492 aa10.75□□□□□ -0.69
PTBP3-205ENST00000374257 ROCK1Q13464 1354 aa10.75□□□□□ -0.69
PTBP3-205ENST00000374257 TEFQ10587 303 aa10.75□□□□□ -0.69
PTBP3-205ENST00000374257 CABP2Q9NPB3 220 aa10.75□□□□□ -0.69
PTBP3-205ENST00000374257 STRN4Q9NRL3 753 aa10.75□□□□□ -0.69
PTBP3-205ENST00000374257 SUPT6HQ7KZ85 1726 aaKnown RBP10.75□□□□□ -0.69
PTBP3-205ENST00000374257 NUP153P49790 1475 aaKnown RBP10.75□□□□□ -0.69
PTBP3-205ENST00000374257 ERBINQ96RT1 1412 aa10.75□□□□□ -0.69
PTBP3-205ENST00000374257 MS4A1P11836 297 aa10.75□□□□□ -0.69
PTBP3-205ENST00000374257 AMOTL2Q9Y2J4 779 aa10.75□□□□□ -0.69
PTBP3-205ENST00000374257 FAM135AQ9P2D6 1515 aa10.74□□□□□ -0.69
PTBP3-205ENST00000374257 TTC5Q8N0Z6 440 aa10.74□□□□□ -0.69
PTBP3-205ENST00000374257 ZNF692Q9BU19 519 aaPredicted RBP10.74□□□□□ -0.69
PTBP3-205ENST00000374257 STK31Q9BXU1 1019 aa10.73□□□□□ -0.69
PTBP3-205ENST00000374257 KIAA1107Q9UPP5 1409 aa10.73□□□□□ -0.69
PTBP3-205ENST00000374257 PANK3Q9H999 370 aa10.73□□□□□ -0.69
PTBP3-205ENST00000374257 OS9Q13438 667 aaPredicted RBP10.73□□□□□ -0.69
PTBP3-205ENST00000374257 KIAA0556O60303 1618 aa10.73□□□□□ -0.69
PTBP3-205ENST00000374257 RAPGEF6Q8TEU7 1601 aa10.73□□□□□ -0.69
PTBP3-205ENST00000374257 A2MP01023 1474 aa10.73□□□□□ -0.69
PTBP3-205ENST00000374257 USP47Q96K76 1375 aa10.73□□□□□ -0.69
PTBP3-205ENST00000374257 CNTLNQ9NXG0 1405 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms