RNA–Protein interactions for RNA: ENST00000373034.8

PCDH19-202, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 9,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-202ENST00000373034 PHLDB1Q86UU1 1377 aa18.94■□□□□ 0.62
PCDH19-202ENST00000373034 KCNH8Q96L42 1107 aa18.94■□□□□ 0.62
PCDH19-202ENST00000373034 TIMELESSQ9UNS1 1208 aa18.94■□□□□ 0.62
PCDH19-202ENST00000373034 KRI1Q8N9T8 703 aaKnown RBP18.94■□□□□ 0.62
PCDH19-202ENST00000373034 H0YHG0 523 aa18.94■□□□□ 0.62
PCDH19-202ENST00000373034 AKAP17AQ02040 695 aaKnown RBP18.94■□□□□ 0.62
PCDH19-202ENST00000373034 MYO6Q9UM54 1294 aa18.93■□□□□ 0.62
PCDH19-202ENST00000373034 TCEAL9Q9UHQ7 104 aa18.92■□□□□ 0.62
PCDH19-202ENST00000373034 EIF3AQ14152 1382 aaKnown RBP18.92■□□□□ 0.62
PCDH19-202ENST00000373034 CCDC47Q96A33 483 aaKnown RBP18.91■□□□□ 0.62
PCDH19-202ENST00000373034 PCMTD1Q96MG8 357 aaPredicted RBP18.91■□□□□ 0.62
PCDH19-202ENST00000373034 HDGFL2Q7Z4V5 671 aaPredicted RBP18.91■□□□□ 0.62
PCDH19-202ENST00000373034 SMC4Q9NTJ3 1288 aa18.91■□□□□ 0.62
PCDH19-202ENST00000373034 LRRFIP1Q32MZ4 808 aaKnown RBP18.91■□□□□ 0.62
PCDH19-202ENST00000373034 FBXO3Q9UK99 471 aa18.89■□□□□ 0.61
PCDH19-202ENST00000373034 DCAF11Q8TEB1 546 aa18.89■□□□□ 0.61
PCDH19-202ENST00000373034 G3V3G9 751 aa18.89■□□□□ 0.61
PCDH19-202ENST00000373034 DCAF8Q5TAQ9 597 aa18.89■□□□□ 0.61
PCDH19-202ENST00000373034 ERCC4Q92889 916 aaPredicted RBP18.89■□□□□ 0.61
PCDH19-202ENST00000373034 CCDC173Q0VFZ6 552 aa18.88■□□□□ 0.61
PCDH19-202ENST00000373034 NOL8Q76FK4 1167 aaKnown RBP18.88■□□□□ 0.61
PCDH19-202ENST00000373034 DIAPH3Q9NSV4 1193 aa18.88■□□□□ 0.61
PCDH19-202ENST00000373034 FAM43AQ8N2R8 423 aa18.88■□□□□ 0.61
PCDH19-202ENST00000373034 ZRSR2Q15696 482 aaKnown RBP18.87■□□□□ 0.61
PCDH19-202ENST00000373034 CEP164Q9UPV0 1460 aa18.87■□□□□ 0.61
PCDH19-202ENST00000373034 FOXD4L1Q9NU39 408 aa18.87■□□□□ 0.61
PCDH19-202ENST00000373034 FHAD1B1AJZ9 1412 aa18.86■□□□□ 0.61
PCDH19-202ENST00000373034 MNS1Q8NEH6 495 aa18.85■□□□□ 0.61
PCDH19-202ENST00000373034 ODF2Q5BJF6 829 aa18.85■□□□□ 0.61
PCDH19-202ENST00000373034 TRIM29Q14134 588 aa18.85■□□□□ 0.61
PCDH19-202ENST00000373034 LMOD3Q0VAK6 560 aa18.84■□□□□ 0.61
PCDH19-202ENST00000373034 SYNE3Q6ZMZ3 975 aa18.84■□□□□ 0.61
PCDH19-202ENST00000373034 CPLX2Q6PUV4 134 aaKnown RBP18.84■□□□□ 0.61
PCDH19-202ENST00000373034 U2AF1L5P0DN76 240 aaPredicted RBP18.83■□□□□ 0.61
PCDH19-202ENST00000373034 U2AF1Q01081 240 aaKnown RBP eCLIP18.83■□□□□ 0.61
PCDH19-202ENST00000373034 SOX12O15370 315 aa18.83■□□□□ 0.61
PCDH19-202ENST00000373034 TOMM22Q9NS69 142 aa18.83■□□□□ 0.61
PCDH19-202ENST00000373034 CENPQQ7L2Z9 268 aaPredicted RBP18.83■□□□□ 0.6
PCDH19-202ENST00000373034 FOXD4L5Q5VV16 416 aaPredicted RBP18.83■□□□□ 0.6
PCDH19-202ENST00000373034 FOXD4L4Q8WXT5 416 aaPredicted RBP18.83■□□□□ 0.6
PCDH19-202ENST00000373034 ROCK2O75116 1388 aaKnown RBP18.82■□□□□ 0.6
PCDH19-202ENST00000373034 CENPJQ9HC77 1338 aaPredicted RBP18.82■□□□□ 0.6
PCDH19-202ENST00000373034 NEXNQ0ZGT2 675 aa18.82■□□□□ 0.6
PCDH19-202ENST00000373034 NAT10Q9H0A0 1025 aaKnown RBP18.82■□□□□ 0.6
PCDH19-202ENST00000373034 FAM161AQ3B820 660 aa18.82■□□□□ 0.6
PCDH19-202ENST00000373034 ANO8Q9HCE9 1232 aaPredicted RBP18.82■□□□□ 0.6
PCDH19-202ENST00000373034 CT47A1Q5JQC4 288 aaPredicted RBP18.82■□□□□ 0.6
PCDH19-202ENST00000373034 MCTP1Q6DN14 999 aa18.81■□□□□ 0.6
PCDH19-202ENST00000373034 LEKR1Q6ZMV7 388 aa18.81■□□□□ 0.6
PCDH19-202ENST00000373034 ZNF330Q9Y3S2 320 aaPredicted RBP18.81■□□□□ 0.6
PCDH19-202ENST00000373034 CCNB3Q8WWL7 1395 aa18.8■□□□□ 0.6
PCDH19-202ENST00000373034 AMOTL1Q8IY63 956 aa18.8■□□□□ 0.6
PCDH19-202ENST00000373034 PDE3BQ13370 1112 aa18.8■□□□□ 0.6
PCDH19-202ENST00000373034 NAP1L1P55209 391 aaKnown RBP18.8■□□□□ 0.6
PCDH19-202ENST00000373034 FRAT2O75474 233 aaPredicted RBP18.8■□□□□ 0.6
PCDH19-202ENST00000373034 IFT57Q9NWB7 429 aa18.8■□□□□ 0.6
PCDH19-202ENST00000373034 REC8O95072 547 aa18.79■□□□□ 0.6
PCDH19-202ENST00000373034 SASS6Q6UVJ0 657 aa18.79■□□□□ 0.6
PCDH19-202ENST00000373034 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.79■□□□□ 0.6
PCDH19-202ENST00000373034 TSHZ2Q9NRE2 1034 aa18.79■□□□□ 0.6
PCDH19-202ENST00000373034 GOLGA6L7A0A1B0GV03 622 aa18.78■□□□□ 0.6
PCDH19-202ENST00000373034 STK11IPQ8N1F8 1099 aa18.78■□□□□ 0.6
PCDH19-202ENST00000373034 INCENPQ9NQS7 918 aa18.77■□□□□ 0.59
PCDH19-202ENST00000373034 RUFY2Q8WXA3 655 aa18.77■□□□□ 0.59
PCDH19-202ENST00000373034 WWC1Q8IX03 1113 aa18.76■□□□□ 0.59
PCDH19-202ENST00000373034 SIN3AQ96ST3 1273 aa18.76■□□□□ 0.59
PCDH19-202ENST00000373034 CNKSR2Q8WXI2 1034 aa18.76■□□□□ 0.59
PCDH19-202ENST00000373034 CGNL1Q0VF96 1302 aa18.76■□□□□ 0.59
PCDH19-202ENST00000373034 EPS15P42566 896 aa18.76■□□□□ 0.59
PCDH19-202ENST00000373034 SLC4A10Q6U841 1118 aa18.76■□□□□ 0.59
PCDH19-202ENST00000373034 CCP110O43303 1012 aa18.76■□□□□ 0.59
PCDH19-202ENST00000373034 CAGE1Q8TC20 777 aa18.75■□□□□ 0.59
PCDH19-202ENST00000373034 CCDC39Q9UFE4 941 aa18.75■□□□□ 0.59
PCDH19-202ENST00000373034 KIF27Q86VH2 1401 aa18.75■□□□□ 0.59
PCDH19-202ENST00000373034 ARHGAP35Q9NRY4 1499 aa18.74■□□□□ 0.59
PCDH19-202ENST00000373034 HSP90AB2PQ58FF8 381 aa18.74■□□□□ 0.59
PCDH19-202ENST00000373034 ZKSCAN1P17029 563 aaPredicted RBP18.74■□□□□ 0.59
PCDH19-202ENST00000373034 RILPL2Q969X0 211 aa18.74■□□□□ 0.59
PCDH19-202ENST00000373034 BICD2Q8TD16 824 aa18.73■□□□□ 0.59
PCDH19-202ENST00000373034 SETD5Q9C0A6 1442 aa18.71■□□□□ 0.59
PCDH19-202ENST00000373034 HSP90AB3PQ58FF7 597 aa18.71■□□□□ 0.59
PCDH19-202ENST00000373034 PAK3O75914 559 aaPredicted RBP18.71■□□□□ 0.59
PCDH19-202ENST00000373034 GOLGA6L10A6NI86 522 aa18.71■□□□□ 0.59
PCDH19-202ENST00000373034 CCDC43Q96MW1 224 aaKnown RBP18.71■□□□□ 0.59
PCDH19-202ENST00000373034 DYDC1Q8WWB3 177 aa18.7■□□□□ 0.58
PCDH19-202ENST00000373034 USP8P40818 1118 aa18.7■□□□□ 0.58
PCDH19-202ENST00000373034 RNF20Q5VTR2 975 aa18.7■□□□□ 0.58
PCDH19-202ENST00000373034 NOL10Q9BSC4 688 aaKnown RBP18.7■□□□□ 0.58
PCDH19-202ENST00000373034 KIAA0754O94854 1291 aa18.7■□□□□ 0.58
PCDH19-202ENST00000373034 FOXD4L6Q3SYB3 417 aaPredicted RBP18.7■□□□□ 0.58
PCDH19-202ENST00000373034 FOXD4L3Q6VB84 417 aaPredicted RBP18.7■□□□□ 0.58
PCDH19-202ENST00000373034 CSB-PGBD3P0DP91 1061 aa18.7■□□□□ 0.58
PCDH19-202ENST00000373034 TAF3Q5VWG9 929 aa18.7■□□□□ 0.58
PCDH19-202ENST00000373034 TRIM34Q9BYJ4 488 aa18.7■□□□□ 0.58
PCDH19-202ENST00000373034 NUCB2P80303 420 aa18.7■□□□□ 0.58
PCDH19-202ENST00000373034 OLFM4Q6UX06 510 aa18.7■□□□□ 0.58
PCDH19-202ENST00000373034 PLCD4Q9BRC7 762 aa18.69■□□□□ 0.58
PCDH19-202ENST00000373034 CPLX1O14810 134 aa18.69■□□□□ 0.58
PCDH19-202ENST00000373034 ERLIN2O94905 339 aa18.68■□□□□ 0.58
PCDH19-202ENST00000373034 ANKRD18AQ8IVF6 992 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms