RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CNTLNQ9NXG0 1405 aa6.98□□□□□ -1.29
SMNDC1-202ENST00000369603 MORC1Q86VD1 984 aa6.97□□□□□ -1.29
SMNDC1-202ENST00000369603 SENP3Q9H4L4 574 aaPredicted RBP6.97□□□□□ -1.29
SMNDC1-202ENST00000369603 ATP10BO94823 1461 aa6.97□□□□□ -1.29
SMNDC1-202ENST00000369603 ANKRD30BQ9BXX2 1392 aa6.97□□□□□ -1.29
SMNDC1-202ENST00000369603 MYBBP1AQ9BQG0 1328 aaKnown RBP6.97□□□□□ -1.29
SMNDC1-202ENST00000369603 KIF7Q2M1P5 1343 aa6.97□□□□□ -1.29
SMNDC1-202ENST00000369603 RBM19Q9Y4C8 960 aaKnown RBP6.97□□□□□ -1.29
SMNDC1-202ENST00000369603 DISP1Q96F81 1524 aa6.97□□□□□ -1.29
SMNDC1-202ENST00000369603 NBR1Q14596 966 aa6.96□□□□□ -1.29
SMNDC1-202ENST00000369603 MAPK8IP3Q9UPT6 1336 aa6.96□□□□□ -1.3
SMNDC1-202ENST00000369603 HDGFL2Q7Z4V5 671 aaPredicted RBP6.96□□□□□ -1.3
SMNDC1-202ENST00000369603 WASHC2AQ641Q2 1341 aa6.96□□□□□ -1.3
SMNDC1-202ENST00000369603 FAM69CQ0P6D2 419 aa6.95□□□□□ -1.3
SMNDC1-202ENST00000369603 SCAPERQ9BY12 1400 aa6.95□□□□□ -1.3
SMNDC1-202ENST00000369603 TRHP20396 242 aaPredicted RBP6.95□□□□□ -1.3
SMNDC1-202ENST00000369603 PDE3BQ13370 1112 aa6.95□□□□□ -1.3
SMNDC1-202ENST00000369603 PTPRKQ15262 1439 aa6.95□□□□□ -1.3
SMNDC1-202ENST00000369603 STK26Q9P289 416 aa6.95□□□□□ -1.3
SMNDC1-202ENST00000369603 NBPF8Q3BBV2 869 aa6.94□□□□□ -1.3
SMNDC1-202ENST00000369603 PANK3Q9H999 370 aa6.94□□□□□ -1.3
SMNDC1-202ENST00000369603 TERF2IPQ9NYB0 399 aa6.94□□□□□ -1.3
SMNDC1-202ENST00000369603 RPRD2Q5VT52 1461 aaKnown RBP6.94□□□□□ -1.3
SMNDC1-202ENST00000369603 MAPKBP1O60336 1514 aa6.94□□□□□ -1.3
SMNDC1-202ENST00000369603 UPF2Q9HAU5 1272 aaKnown RBP6.94□□□□□ -1.3
SMNDC1-202ENST00000369603 TNNT2P45379 298 aaPredicted RBP6.93□□□□□ -1.3
SMNDC1-202ENST00000369603 SAFB2Q14151 953 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMNDC1-202ENST00000369603 ZBED9Q6R2W3 1325 aa6.93□□□□□ -1.3
SMNDC1-202ENST00000369603 TRAK1Q9UPV9 953 aa6.93□□□□□ -1.3
SMNDC1-202ENST00000369603 PPM1GO15355 546 aaPredicted RBP6.92□□□□□ -1.3
SMNDC1-202ENST00000369603 NPM2Q86SE8 214 aaKnown RBP6.92□□□□□ -1.3
SMNDC1-202ENST00000369603 MS4A1P11836 297 aa6.92□□□□□ -1.3
SMNDC1-202ENST00000369603 C14orf37Q86TY3 774 aa6.92□□□□□ -1.3
SMNDC1-202ENST00000369603 EVC2Q86UK5 1308 aa6.92□□□□□ -1.3
SMNDC1-202ENST00000369603 U2SURPO15042 1029 aaKnown RBP6.92□□□□□ -1.3
SMNDC1-202ENST00000369603 PLCH2O75038 1416 aa6.92□□□□□ -1.3
SMNDC1-202ENST00000369603 NEUROD2Q15784 382 aa6.92□□□□□ -1.3
SMNDC1-202ENST00000369603 SHANK2Q9UPX8 1470 aa6.92□□□□□ -1.3
SMNDC1-202ENST00000369603 SENP3-EIF4A1A0A087X0R7 540 aa6.91□□□□□ -1.3
SMNDC1-202ENST00000369603 ADGRL1O94910 1474 aa6.91□□□□□ -1.3
SMNDC1-202ENST00000369603 CD109Q6YHK3 1445 aa6.91□□□□□ -1.3
SMNDC1-202ENST00000369603 EID1Q9Y6B2 187 aa6.91□□□□□ -1.3
SMNDC1-202ENST00000369603 CENPJQ9HC77 1338 aaPredicted RBP6.91□□□□□ -1.3
SMNDC1-202ENST00000369603 CEP170Q5SW79 1584 aa6.91□□□□□ -1.3
SMNDC1-202ENST00000369603 RCAN3Q9UKA8 241 aa6.9□□□□□ -1.3
SMNDC1-202ENST00000369603 DNMT1P26358 1616 aaKnown RBP6.9□□□□□ -1.3
SMNDC1-202ENST00000369603 CHMP4BQ9H444 224 aaKnown RBP6.9□□□□□ -1.31
SMNDC1-202ENST00000369603 FANCAO15360 1455 aa6.9□□□□□ -1.31
SMNDC1-202ENST00000369603 NGEFQ8N5V2 710 aa6.9□□□□□ -1.31
SMNDC1-202ENST00000369603 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.9□□□□□ -1.31
SMNDC1-202ENST00000369603 MYH16Q9H6N6 1097 aa6.9□□□□□ -1.31
SMNDC1-202ENST00000369603 BRD4O60885 1362 aaPredicted RBP6.89□□□□□ -1.31
SMNDC1-202ENST00000369603 ABCC2Q92887 1545 aa6.89□□□□□ -1.31
SMNDC1-202ENST00000369603 CGNL1Q0VF96 1302 aa6.89□□□□□ -1.31
SMNDC1-202ENST00000369603 RPGRIP1LQ68CZ1 1315 aa6.89□□□□□ -1.31
SMNDC1-202ENST00000369603 SLC52A1Q9NWF4 448 aa6.89□□□□□ -1.31
SMNDC1-202ENST00000369603 NUTM2DQ5VT03 806 aaPredicted RBP6.89□□□□□ -1.31
SMNDC1-202ENST00000369603 FTSJ3Q8IY81 847 aaKnown RBP6.89□□□□□ -1.31
SMNDC1-202ENST00000369603 DUOX2Q9NRD8 1548 aa6.88□□□□□ -1.31
SMNDC1-202ENST00000369603 GOLGA2Q08379 1002 aa6.88□□□□□ -1.31
SMNDC1-202ENST00000369603 U2AF1L5P0DN76 240 aaPredicted RBP6.88□□□□□ -1.31
SMNDC1-202ENST00000369603 U2AF1Q01081 240 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMNDC1-202ENST00000369603 ERBINQ96RT1 1412 aa6.88□□□□□ -1.31
SMNDC1-202ENST00000369603 HAP1P54257 671 aaPredicted RBP6.88□□□□□ -1.31
SMNDC1-202ENST00000369603 NBPF1Q3BBV0 1214 aa6.88□□□□□ -1.31
SMNDC1-202ENST00000369603 ADGRL2O95490 1459 aa6.88□□□□□ -1.31
SMNDC1-202ENST00000369603 CALD1Q05682 793 aaKnown RBP6.87□□□□□ -1.31
SMNDC1-202ENST00000369603 B4GALNT3Q6L9W6 998 aa6.87□□□□□ -1.31
SMNDC1-202ENST00000369603 WDR7Q9Y4E6 1490 aa6.87□□□□□ -1.31
SMNDC1-202ENST00000369603 SYCP2Q9BX26 1530 aa6.87□□□□□ -1.31
SMNDC1-202ENST00000369603 DHX29Q7Z478 1369 aaKnown RBP6.87□□□□□ -1.31
SMNDC1-202ENST00000369603 CFAP70Q5T0N1 1121 aa6.87□□□□□ -1.31
SMNDC1-202ENST00000369603 MAGI3Q5TCQ9 1506 aa6.86□□□□□ -1.31
SMNDC1-202ENST00000369603 RAPGEF3O95398 923 aa6.86□□□□□ -1.31
SMNDC1-202ENST00000369603 FRAT1Q92837 279 aaPredicted RBP6.86□□□□□ -1.31
SMNDC1-202ENST00000369603 ASXL2Q76L83 1435 aa6.86□□□□□ -1.31
SMNDC1-202ENST00000369603 DEKP35659 375 aaKnown RBP6.85□□□□□ -1.31
SMNDC1-202ENST00000369603 DDRGK1Q96HY6 314 aa6.85□□□□□ -1.31
SMNDC1-202ENST00000369603 EIF5BO60841 1220 aaKnown RBP6.85□□□□□ -1.31
SMNDC1-202ENST00000369603 DENND4BO75064 1496 aaPredicted RBP6.85□□□□□ -1.31
SMNDC1-202ENST00000369603 LAS1LQ9Y4W2 734 aaKnown RBP6.85□□□□□ -1.31
SMNDC1-202ENST00000369603 ABCA8O94911 1581 aa6.85□□□□□ -1.31
SMNDC1-202ENST00000369603 RTEL1-TNFRSF6BF6WH68 1400 aa6.84□□□□□ -1.31
SMNDC1-202ENST00000369603 NOP58Q9Y2X3 529 aaKnown RBP6.84□□□□□ -1.31
SMNDC1-202ENST00000369603 GCC2Q8IWJ2 1684 aa6.84□□□□□ -1.31
SMNDC1-202ENST00000369603 MINK1Q8N4C8 1332 aaPredicted RBP6.84□□□□□ -1.32
SMNDC1-202ENST00000369603 ZBTB7CA1YPR0 619 aa6.84□□□□□ -1.32
SMNDC1-202ENST00000369603 IPO8O15397 1037 aaKnown RBP6.84□□□□□ -1.32
SMNDC1-202ENST00000369603 FAM135AQ9P2D6 1515 aa6.83□□□□□ -1.32
SMNDC1-202ENST00000369603 ZNF518AQ6AHZ1 1483 aa6.83□□□□□ -1.32
SMNDC1-202ENST00000369603 PPP6R1Q9UPN7 881 aa6.83□□□□□ -1.32
SMNDC1-202ENST00000369603 ARHGEF12Q9NZN5 1544 aa6.83□□□□□ -1.32
SMNDC1-202ENST00000369603 KDM5BQ9UGL1 1544 aa6.83□□□□□ -1.32
SMNDC1-202ENST00000369603 RALGAPBQ86X10 1494 aa6.83□□□□□ -1.32
SMNDC1-202ENST00000369603 E9PSI1 815 aa6.82□□□□□ -1.32
SMNDC1-202ENST00000369603 LMOD3Q0VAK6 560 aa6.82□□□□□ -1.32
SMNDC1-202ENST00000369603 TMEM132EQ6IEE7 984 aa6.82□□□□□ -1.32
SMNDC1-202ENST00000369603 CCDC146Q8IYE0 955 aa6.82□□□□□ -1.32
SMNDC1-202ENST00000369603 PZPP20742 1482 aa6.82□□□□□ -1.32
SMNDC1-202ENST00000369603 ARHGEF5Q12774 1597 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms