RNA–Protein interactions for RNA: ENST00000366856.3

CNIH4-201, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNIH4, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-201ENST00000366856 KCNH8Q96L42 1107 aa9.99□□□□□ -0.81
CNIH4-201ENST00000366856 PTPREP23469 700 aa9.97□□□□□ -0.81
CNIH4-201ENST00000366856 C6orf132Q5T0Z8 1188 aa9.97□□□□□ -0.81
CNIH4-201ENST00000366856 AXIN2Q9Y2T1 843 aa9.97□□□□□ -0.81
CNIH4-201ENST00000366856 ZC3H15Q8WU90 426 aaKnown RBP9.96□□□□□ -0.82
CNIH4-201ENST00000366856 FCHSD2O94868 740 aa9.95□□□□□ -0.82
CNIH4-201ENST00000366856 BCL2L12Q9HB09 334 aa9.95□□□□□ -0.82
CNIH4-201ENST00000366856 PSEN2P49810 448 aa9.94□□□□□ -0.82
CNIH4-201ENST00000366856 POTEB3A0JP26 581 aa9.93□□□□□ -0.82
CNIH4-201ENST00000366856 POTEBQ6S5H4 581 aa9.93□□□□□ -0.82
CNIH4-201ENST00000366856 COL9A1P20849 921 aa9.92□□□□□ -0.82
CNIH4-201ENST00000366856 PTGDRQ13258 359 aa9.92□□□□□ -0.82
CNIH4-201ENST00000366856 KRI1Q8N9T8 703 aaKnown RBP9.92□□□□□ -0.82
CNIH4-201ENST00000366856 POTEGQ6S5H5 508 aa9.9□□□□□ -0.82
CNIH4-201ENST00000366856 ZNF687Q8N1G0 1237 aa9.9□□□□□ -0.82
CNIH4-201ENST00000366856 POTEMA6NI47 508 aa9.89□□□□□ -0.83
CNIH4-201ENST00000366856 PPP1R3GB7ZBB8 358 aa9.89□□□□□ -0.83
CNIH4-201ENST00000366856 ARHGAP33O14559 1287 aa9.89□□□□□ -0.83
CNIH4-201ENST00000366856 GNPATO15228 680 aa9.88□□□□□ -0.83
CNIH4-201ENST00000366856 GPR37O15354 613 aa9.88□□□□□ -0.83
CNIH4-201ENST00000366856 HIC1Q14526 733 aa9.88□□□□□ -0.83
CNIH4-201ENST00000366856 NPDC1Q9NQX5 325 aaPredicted RBP9.88□□□□□ -0.83
CNIH4-201ENST00000366856 FECHP22830 423 aa9.87□□□□□ -0.83
CNIH4-201ENST00000366856 PBX2P40425 430 aa9.87□□□□□ -0.83
CNIH4-201ENST00000366856 PROX2Q3B8N5 592 aa9.87□□□□□ -0.83
CNIH4-201ENST00000366856 DMRTA1Q5VZB9 504 aa9.87□□□□□ -0.83
CNIH4-201ENST00000366856 PADI6Q6TGC4 694 aa9.87□□□□□ -0.83
CNIH4-201ENST00000366856 CERKQ8TCT0 537 aa9.87□□□□□ -0.83
CNIH4-201ENST00000366856 POTEEQ6S8J3 1075 aa9.86□□□□□ -0.83
CNIH4-201ENST00000366856 CDCA7LQ96GN5 454 aa9.86□□□□□ -0.83
CNIH4-201ENST00000366856 ZMYND10O75800 440 aa9.85□□□□□ -0.83
CNIH4-201ENST00000366856 PRSS12P56730 875 aa9.84□□□□□ -0.83
CNIH4-201ENST00000366856 FAM161AQ3B820 660 aa9.84□□□□□ -0.83
CNIH4-201ENST00000366856 ANKRD13DQ6ZTN6 518 aa9.84□□□□□ -0.83
CNIH4-201ENST00000366856 SLC24A3Q9HC58 644 aa9.84□□□□□ -0.83
CNIH4-201ENST00000366856 BARGINQ6ZT62 677 aa9.82□□□□□ -0.84
CNIH4-201ENST00000366856 LSM11P83369 360 aaKnown RBP eCLIP9.81□□□□□ -0.84
CNIH4-201ENST00000366856 MAP2K5Q13163 448 aa9.81□□□□□ -0.84
CNIH4-201ENST00000366856 ZBED2Q9BTP6 218 aa9.81□□□□□ -0.84
CNIH4-201ENST00000366856 TRIM6-TRIM34B2RNG4 842 aa9.8□□□□□ -0.84
CNIH4-201ENST00000366856 CDAN1Q8IWY9 1227 aa9.8□□□□□ -0.84
CNIH4-201ENST00000366856 TSKSQ9UJT2 592 aa9.8□□□□□ -0.84
CNIH4-201ENST00000366856 PACS2Q86VP3 889 aa9.79□□□□□ -0.84
CNIH4-201ENST00000366856 CCDC102AQ96A19 550 aa9.79□□□□□ -0.84
CNIH4-201ENST00000366856 KIAA1468Q9P260 1216 aa9.79□□□□□ -0.84
CNIH4-201ENST00000366856 SMAPO00193 183 aa9.78□□□□□ -0.84
CNIH4-201ENST00000366856 FAM198AQ9UFP1 575 aa9.78□□□□□ -0.84
CNIH4-201ENST00000366856 PNMA3Q9UL41 463 aa9.78□□□□□ -0.84
CNIH4-201ENST00000366856 NBPF26B4DH59 902 aa9.77□□□□□ -0.85
CNIH4-201ENST00000366856 NUDT18Q6ZVK8 323 aa9.77□□□□□ -0.85
CNIH4-201ENST00000366856 STAC3Q96MF2 364 aa9.77□□□□□ -0.85
CNIH4-201ENST00000366856 RBM27Q9P2N5 1060 aaKnown RBP9.77□□□□□ -0.85
CNIH4-201ENST00000366856 SEPT9Q9UHD8 586 aaPredicted RBP9.77□□□□□ -0.85
CNIH4-201ENST00000366856 VPS9D1Q9Y2B5 631 aa9.77□□□□□ -0.85
CNIH4-201ENST00000366856 MINK1Q8N4C8 1332 aaPredicted RBP9.77□□□□□ -0.85
CNIH4-201ENST00000366856 IRF6O14896 467 aa9.76□□□□□ -0.85
CNIH4-201ENST00000366856 ADGRD1Q6QNK2 874 aa9.76□□□□□ -0.85
CNIH4-201ENST00000366856 NLRP7Q8WX94 980 aa9.75□□□□□ -0.85
CNIH4-201ENST00000366856 AK7Q96M32 723 aa9.75□□□□□ -0.85
CNIH4-201ENST00000366856 ADGRG1Q9Y653 693 aa9.75□□□□□ -0.85
CNIH4-201ENST00000366856 KRTAP3-3Q9BYR6 98 aa9.74□□□□□ -0.85
CNIH4-201ENST00000366856 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
CNIH4-201ENST00000366856 C3orf80F5H4A9 247 aa9.73□□□□□ -0.85
CNIH4-201ENST00000366856 RBM46Q8TBY0 533 aaKnown RBP9.73□□□□□ -0.85
CNIH4-201ENST00000366856 TATDN2Q93075 761 aa9.73□□□□□ -0.85
CNIH4-201ENST00000366856 NBPF3Q9H094 633 aa9.73□□□□□ -0.85
CNIH4-201ENST00000366856 RABGEF1Q9UJ41 708 aa9.73□□□□□ -0.85
CNIH4-201ENST00000366856 TTC13Q8NBP0 860 aa9.72□□□□□ -0.85
CNIH4-201ENST00000366856 OATP04181 439 aa9.71□□□□□ -0.86
CNIH4-201ENST00000366856 TTLL12Q14166 644 aaPredicted RBP9.71□□□□□ -0.86
CNIH4-201ENST00000366856 METTL3Q86U44 580 aaKnown RBP9.71□□□□□ -0.86
CNIH4-201ENST00000366856 MRPL50Q8N5N7 158 aaKnown RBP9.71□□□□□ -0.86
CNIH4-201ENST00000366856 SLC4A5Q9BY07 1137 aa9.71□□□□□ -0.86
CNIH4-201ENST00000366856 TK2O00142 265 aa9.7□□□□□ -0.86
CNIH4-201ENST00000366856 GOLGA8CPA6NN73 597 aa9.69□□□□□ -0.86
CNIH4-201ENST00000366856 TRIM66O15016 1216 aa9.69□□□□□ -0.86
CNIH4-201ENST00000366856 RNF40O75150 1001 aa9.69□□□□□ -0.86
CNIH4-201ENST00000366856 ONECUT3O60422 494 aaPredicted RBP9.68□□□□□ -0.86
CNIH4-201ENST00000366856 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
CNIH4-201ENST00000366856 PXYLP1Q8TE99 480 aa9.68□□□□□ -0.86
CNIH4-201ENST00000366856 PHOX2BQ99453 314 aa9.68□□□□□ -0.86
CNIH4-201ENST00000366856 RCCD1A6NED2 376 aa9.67□□□□□ -0.86
CNIH4-201ENST00000366856 NEUROD2Q15784 382 aa9.67□□□□□ -0.86
CNIH4-201ENST00000366856 FAM98CQ17RN3 349 aaKnown RBP9.66□□□□□ -0.86
CNIH4-201ENST00000366856 EYA1Q99502 592 aa9.66□□□□□ -0.86
CNIH4-201ENST00000366856 DNAJB2P25686 324 aa9.65□□□□□ -0.86
CNIH4-201ENST00000366856 PDE4DQ08499 809 aa9.65□□□□□ -0.86
CNIH4-201ENST00000366856 HDGFP51858 240 aaKnown RBP9.64□□□□□ -0.87
CNIH4-201ENST00000366856 GPBP1L1Q9HC44 474 aaPredicted RBP9.64□□□□□ -0.87
CNIH4-201ENST00000366856 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.63□□□□□ -0.87
CNIH4-201ENST00000366856 BHMG1C9JSJ3 638 aaPredicted RBP9.63□□□□□ -0.87
CNIH4-201ENST00000366856 HRO43593 1189 aa9.63□□□□□ -0.87
CNIH4-201ENST00000366856 SWT1Q5T5J6 900 aaKnown RBP9.62□□□□□ -0.87
CNIH4-201ENST00000366856 SAMD7Q7Z3H4 446 aa9.62□□□□□ -0.87
CNIH4-201ENST00000366856 ZFRQ96KR1 1074 aaKnown RBP9.62□□□□□ -0.87
CNIH4-201ENST00000366856 CLCN1P35523 988 aa9.61□□□□□ -0.87
CNIH4-201ENST00000366856 LAPTM4BQ86VI4 370 aa9.61□□□□□ -0.87
CNIH4-201ENST00000366856 PARP9Q8IXQ6 854 aa9.61□□□□□ -0.87
CNIH4-201ENST00000366856 SLC4A3P48751 1232 aa9.6□□□□□ -0.87
CNIH4-201ENST00000366856 AMHR2Q16671 573 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms