RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 MTERF4Q7Z6M4 381 aaKnown RBP20.63■□□□□ 0.89
NID1-202ENST00000366595 FAM184AQ8NB25 1140 aa20.62■□□□□ 0.89
NID1-202ENST00000366595 CENPQQ7L2Z9 268 aaPredicted RBP20.61■□□□□ 0.89
NID1-202ENST00000366595 FAM161AQ3B820 660 aa20.61■□□□□ 0.89
NID1-202ENST00000366595 AK7Q96M32 723 aa20.6■□□□□ 0.89
NID1-202ENST00000366595 EIF3AQ14152 1382 aaKnown RBP20.6■□□□□ 0.89
NID1-202ENST00000366595 CCDC47Q96A33 483 aaKnown RBP20.6■□□□□ 0.89
NID1-202ENST00000366595 MAP7D2Q96T17 732 aa20.6■□□□□ 0.89
NID1-202ENST00000366595 FOXD4L1Q9NU39 408 aa20.6■□□□□ 0.89
NID1-202ENST00000366595 SETD5Q9C0A6 1442 aa20.59■□□□□ 0.89
NID1-202ENST00000366595 SOX12O15370 315 aa20.59■□□□□ 0.89
NID1-202ENST00000366595 PATL2C9JE40 543 aaKnown RBP20.59■□□□□ 0.89
NID1-202ENST00000366595 CPLX2Q6PUV4 134 aaKnown RBP20.58■□□□□ 0.89
NID1-202ENST00000366595 NOL8Q76FK4 1167 aaKnown RBP20.58■□□□□ 0.89
NID1-202ENST00000366595 HOOK1Q9UJC3 728 aaKnown RBP20.57■□□□□ 0.88
NID1-202ENST00000366595 ROCK2O75116 1388 aaKnown RBP20.57■□□□□ 0.88
NID1-202ENST00000366595 AKAP17AQ02040 695 aaKnown RBP20.57■□□□□ 0.88
NID1-202ENST00000366595 RUFY1Q96T51 708 aa20.56■□□□□ 0.88
NID1-202ENST00000366595 CHMP3Q9Y3E7 222 aa20.56■□□□□ 0.88
NID1-202ENST00000366595 LRRFIP1Q32MZ4 808 aaKnown RBP20.56■□□□□ 0.88
NID1-202ENST00000366595 WRNQ14191 1432 aaPredicted RBP eCLIP20.56■□□□□ 0.88
NID1-202ENST00000366595 NLRP13Q86W25 1043 aa20.56■□□□□ 0.88
NID1-202ENST00000366595 ZNF592Q92610 1267 aa20.55■□□□□ 0.88
NID1-202ENST00000366595 TOMM22Q9NS69 142 aa20.55■□□□□ 0.88
NID1-202ENST00000366595 CWC15Q9P013 229 aaKnown RBP20.54■□□□□ 0.88
NID1-202ENST00000366595 HSP90B2PQ58FF3 399 aa20.54■□□□□ 0.88
NID1-202ENST00000366595 HOMER1Q86YM7 354 aa20.54■□□□□ 0.88
NID1-202ENST00000366595 DCTN1Q14203 1278 aa20.53■□□□□ 0.88
NID1-202ENST00000366595 FAM13BQ9NYF5 915 aa20.53■□□□□ 0.88
NID1-202ENST00000366595 SYNE3Q6ZMZ3 975 aa20.52■□□□□ 0.88
NID1-202ENST00000366595 CCDC191Q8NCU4 936 aa20.52■□□□□ 0.88
NID1-202ENST00000366595 FAM43AQ8N2R8 423 aa20.52■□□□□ 0.88
NID1-202ENST00000366595 DIAPH3Q9NSV4 1193 aa20.52■□□□□ 0.88
NID1-202ENST00000366595 PDE4AP27815 886 aa20.51■□□□□ 0.87
NID1-202ENST00000366595 TERF2IPQ9NYB0 399 aa20.51■□□□□ 0.87
NID1-202ENST00000366595 CSB-PGBD3P0DP91 1061 aa20.51■□□□□ 0.87
NID1-202ENST00000366595 VPS53Q5VIR6 699 aa20.51■□□□□ 0.87
NID1-202ENST00000366595 REC8O95072 547 aa20.5■□□□□ 0.87
NID1-202ENST00000366595 RUFY2Q8WXA3 655 aa20.5■□□□□ 0.87
NID1-202ENST00000366595 ZNF330Q9Y3S2 320 aaPredicted RBP20.5■□□□□ 0.87
NID1-202ENST00000366595 MNS1Q8NEH6 495 aa20.5■□□□□ 0.87
NID1-202ENST00000366595 FANCIQ9NVI1 1328 aa20.49■□□□□ 0.87
NID1-202ENST00000366595 CCDC66A2RUB6 948 aa20.49■□□□□ 0.87
NID1-202ENST00000366595 CHMP5Q9NZZ3 219 aa20.49■□□□□ 0.87
NID1-202ENST00000366595 FOXD4L5Q5VV16 416 aaPredicted RBP20.49■□□□□ 0.87
NID1-202ENST00000366595 SLC4A10Q6U841 1118 aa20.49■□□□□ 0.87
NID1-202ENST00000366595 FOXD4L4Q8WXT5 416 aaPredicted RBP20.49■□□□□ 0.87
NID1-202ENST00000366595 TRIM29Q14134 588 aa20.48■□□□□ 0.87
NID1-202ENST00000366595 ERCC4Q92889 916 aaPredicted RBP20.48■□□□□ 0.87
NID1-202ENST00000366595 PCMTD1Q96MG8 357 aaPredicted RBP20.48■□□□□ 0.87
NID1-202ENST00000366595 CLUAP1Q96AJ1 413 aa20.47■□□□□ 0.87
NID1-202ENST00000366595 CGNL1Q0VF96 1302 aa20.46■□□□□ 0.87
NID1-202ENST00000366595 G3V3G9 751 aa20.46■□□□□ 0.87
NID1-202ENST00000366595 ZKSCAN1P17029 563 aaPredicted RBP20.46■□□□□ 0.87
NID1-202ENST00000366595 DCAF8Q5TAQ9 597 aa20.46■□□□□ 0.87
NID1-202ENST00000366595 SAFB2Q14151 953 aaKnown RBP eCLIP20.46■□□□□ 0.87
NID1-202ENST00000366595 PKD2Q13563 968 aa20.45■□□□□ 0.86
NID1-202ENST00000366595 NUCB2P80303 420 aa20.44■□□□□ 0.86
NID1-202ENST00000366595 RDXP35241 583 aaKnown RBP20.44■□□□□ 0.86
NID1-202ENST00000366595 FRAT2O75474 233 aaPredicted RBP20.43■□□□□ 0.86
NID1-202ENST00000366595 MCTP1Q6DN14 999 aa20.42■□□□□ 0.86
NID1-202ENST00000366595 ARHGAP35Q9NRY4 1499 aa20.42■□□□□ 0.86
NID1-202ENST00000366595 RILPL2Q969X0 211 aa20.41■□□□□ 0.86
NID1-202ENST00000366595 SASS6Q6UVJ0 657 aa20.41■□□□□ 0.86
NID1-202ENST00000366595 CCDC173Q0VFZ6 552 aa20.41■□□□□ 0.86
NID1-202ENST00000366595 H0YHG0 523 aa20.4■□□□□ 0.86
NID1-202ENST00000366595 BICD2Q8TD16 824 aa20.4■□□□□ 0.86
NID1-202ENST00000366595 CCDC39Q9UFE4 941 aa20.4■□□□□ 0.86
NID1-202ENST00000366595 ZKSCAN2Q63HK3 967 aa20.4■□□□□ 0.86
NID1-202ENST00000366595 PAK3O75914 559 aaPredicted RBP20.4■□□□□ 0.86
NID1-202ENST00000366595 STK26Q9P289 416 aa20.4■□□□□ 0.86
NID1-202ENST00000366595 MYO6Q9UM54 1294 aa20.39■□□□□ 0.86
NID1-202ENST00000366595 ANKRD45Q5TZF3 282 aa20.39■□□□□ 0.85
NID1-202ENST00000366595 AMOTL1Q8IY63 956 aa20.39■□□□□ 0.85
NID1-202ENST00000366595 RNF20Q5VTR2 975 aa20.39■□□□□ 0.85
NID1-202ENST00000366595 APPP05067 770 aa20.39■□□□□ 0.85
NID1-202ENST00000366595 KIF15Q9NS87 1388 aa20.39■□□□□ 0.85
NID1-202ENST00000366595 IFT57Q9NWB7 429 aa20.38■□□□□ 0.85
NID1-202ENST00000366595 E9PSI1 815 aa20.38■□□□□ 0.85
NID1-202ENST00000366595 NGEFQ8N5V2 710 aa20.38■□□□□ 0.85
NID1-202ENST00000366595 TCEAL9Q9UHQ7 104 aa20.38■□□□□ 0.85
NID1-202ENST00000366595 CPLX1O14810 134 aa20.37■□□□□ 0.85
NID1-202ENST00000366595 CCDC73Q6ZRK6 1079 aa20.36■□□□□ 0.85
NID1-202ENST00000366595 MRE11P49959 708 aa20.36■□□□□ 0.85
NID1-202ENST00000366595 MYBBP1AQ9BQG0 1328 aaKnown RBP20.36■□□□□ 0.85
NID1-202ENST00000366595 NAT10Q9H0A0 1025 aaKnown RBP20.36■□□□□ 0.85
NID1-202ENST00000366595 CCP110O43303 1012 aa20.34■□□□□ 0.85
NID1-202ENST00000366595 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.33■□□□□ 0.84
NID1-202ENST00000366595 RRP1P56182 461 aaKnown RBP20.33■□□□□ 0.84
NID1-202ENST00000366595 HMGN5P82970 282 aaKnown RBP20.33■□□□□ 0.84
NID1-202ENST00000366595 GTF2E1P29083 439 aaPredicted RBP20.32■□□□□ 0.84
NID1-202ENST00000366595 NOL10Q9BSC4 688 aaKnown RBP20.32■□□□□ 0.84
NID1-202ENST00000366595 DDX19BQ9UMR2 479 aa20.32■□□□□ 0.84
NID1-202ENST00000366595 MPHOSPH9Q99550 1183 aa20.32■□□□□ 0.84
NID1-202ENST00000366595 DHX8Q14562 1220 aaKnown RBP20.32■□□□□ 0.84
NID1-202ENST00000366595 ROCK1Q13464 1354 aa20.31■□□□□ 0.84
NID1-202ENST00000366595 CT47A1Q5JQC4 288 aaPredicted RBP20.31■□□□□ 0.84
NID1-202ENST00000366595 CCDC146Q8IYE0 955 aa20.31■□□□□ 0.84
NID1-202ENST00000366595 LETM1O95202 739 aaPredicted RBP20.31■□□□□ 0.84
NID1-202ENST00000366595 AAMPQ13685 434 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms