RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 TBC1D12O60347 775 aa14.53□□□□□ -0.08
YBX3-204ENST00000366290 SMARCA2P51531 1590 aa14.52□□□□□ -0.08
YBX3-204ENST00000366290 RBM26Q5T8P6 1007 aaKnown RBP14.52□□□□□ -0.09
YBX3-204ENST00000366290 PEG3Q9GZU2 1588 aa14.51□□□□□ -0.09
YBX3-204ENST00000366290 PLSCR2Q9NRY7 297 aa14.51□□□□□ -0.09
YBX3-204ENST00000366290 HMGXB3Q12766 1538 aa14.49□□□□□ -0.09
YBX3-204ENST00000366290 GPIHBP1Q8IV16 184 aa14.46□□□□□ -0.09
YBX3-204ENST00000366290 GRXCR2A6NFK2 248 aa14.45□□□□□ -0.1
YBX3-204ENST00000366290 MROH2BQ7Z745 1585 aa14.44□□□□□ -0.1
YBX3-204ENST00000366290 EVI5O60447 810 aa14.44□□□□□ -0.1
YBX3-204ENST00000366290 ZMYND10O75800 440 aa14.44□□□□□ -0.1
YBX3-204ENST00000366290 POTEEQ6S8J3 1075 aa14.44□□□□□ -0.1
YBX3-204ENST00000366290 PSDA5PKW4 1024 aaPredicted RBP14.42□□□□□ -0.1
YBX3-204ENST00000366290 PTGER2P43116 358 aa14.42□□□□□ -0.1
YBX3-204ENST00000366290 SPNS2Q8IVW8 549 aa14.42□□□□□ -0.1
YBX3-204ENST00000366290 ANO8Q9HCE9 1232 aaPredicted RBP14.41□□□□□ -0.1
YBX3-204ENST00000366290 CUX2O14529 1486 aa14.4□□□□□ -0.1
YBX3-204ENST00000366290 DDX12PQ92771 950 aa14.4□□□□□ -0.1
YBX3-204ENST00000366290 SLC24A3Q9HC58 644 aa14.39□□□□□ -0.11
YBX3-204ENST00000366290 BARGINQ6ZT62 677 aa14.38□□□□□ -0.11
YBX3-204ENST00000366290 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
YBX3-204ENST00000366290 OSBPP22059 807 aa14.37□□□□□ -0.11
YBX3-204ENST00000366290 PBX2P40425 430 aa14.35□□□□□ -0.11
YBX3-204ENST00000366290 AXIN2Q9Y2T1 843 aa14.35□□□□□ -0.11
YBX3-204ENST00000366290 NESP48681 1621 aa14.34□□□□□ -0.11
YBX3-204ENST00000366290 ERCC6Q03468 1493 aa14.34□□□□□ -0.11
YBX3-204ENST00000366290 PPP4R3BQ5MIZ7 849 aa14.34□□□□□ -0.11
YBX3-204ENST00000366290 FOSBP53539 338 aa14.33□□□□□ -0.12
YBX3-204ENST00000366290 GPR37O15354 613 aa14.32□□□□□ -0.12
YBX3-204ENST00000366290 ZNF454Q8N9F8 522 aa14.32□□□□□ -0.12
YBX3-204ENST00000366290 NUTM2FA1L443 756 aa14.31□□□□□ -0.12
YBX3-204ENST00000366290 LSM11P83369 360 aaKnown RBP eCLIP14.31□□□□□ -0.12
YBX3-204ENST00000366290 MMRN1Q13201 1228 aa14.31□□□□□ -0.12
YBX3-204ENST00000366290 JPH4Q96JJ6 628 aa14.31□□□□□ -0.12
YBX3-204ENST00000366290 ARHGAP33O14559 1287 aa14.28□□□□□ -0.12
YBX3-204ENST00000366290 PRIM1P49642 420 aaKnown RBP14.28□□□□□ -0.12
YBX3-204ENST00000366290 WIZO95785 1651 aa14.27□□□□□ -0.12
YBX3-204ENST00000366290 KRI1Q8N9T8 703 aaKnown RBP14.27□□□□□ -0.13
YBX3-204ENST00000366290 PSEN2P49810 448 aa14.26□□□□□ -0.13
YBX3-204ENST00000366290 RSF1Q96T23 1441 aaPredicted RBP14.25□□□□□ -0.13
YBX3-204ENST00000366290 BRPF1P55201 1214 aaPredicted RBP14.25□□□□□ -0.13
YBX3-204ENST00000366290 ANKRD13DQ6ZTN6 518 aa14.25□□□□□ -0.13
YBX3-204ENST00000366290 PHF14O94880 888 aa14.24□□□□□ -0.13
YBX3-204ENST00000366290 DMRTA1Q5VZB9 504 aa14.24□□□□□ -0.13
YBX3-204ENST00000366290 AK7Q96M32 723 aa14.24□□□□□ -0.13
YBX3-204ENST00000366290 BCL2L12Q9HB09 334 aa14.24□□□□□ -0.13
YBX3-204ENST00000366290 PCDHGA10Q9Y5H3 936 aa14.24□□□□□ -0.13
YBX3-204ENST00000366290 EPAS1Q99814 870 aa14.23□□□□□ -0.13
YBX3-204ENST00000366290 ZDHHC16Q969W1 377 aa14.22□□□□□ -0.13
YBX3-204ENST00000366290 FCHSD2O94868 740 aa14.21□□□□□ -0.13
YBX3-204ENST00000366290 NEUROD2Q15784 382 aa14.21□□□□□ -0.13
YBX3-204ENST00000366290 KCNK17Q96T54 332 aa14.21□□□□□ -0.13
YBX3-204ENST00000366290 ADAM33Q9BZ11 813 aa14.21□□□□□ -0.13
YBX3-204ENST00000366290 EN1Q05925 392 aaPredicted RBP14.2□□□□□ -0.14
YBX3-204ENST00000366290 THOC2Q8NI27 1593 aaKnown RBP14.18□□□□□ -0.14
YBX3-204ENST00000366290 LAMC3Q9Y6N6 1575 aa14.18□□□□□ -0.14
YBX3-204ENST00000366290 GNPATO15228 680 aa14.18□□□□□ -0.14
YBX3-204ENST00000366290 HIC1Q14526 733 aa14.18□□□□□ -0.14
YBX3-204ENST00000366290 PTGDRQ13258 359 aa14.17□□□□□ -0.14
YBX3-204ENST00000366290 TYW1BQ6NUM6 668 aa14.17□□□□□ -0.14
YBX3-204ENST00000366290 ADGRD1Q6QNK2 874 aa14.17□□□□□ -0.14
YBX3-204ENST00000366290 MAP3K7O43318 606 aa14.16□□□□□ -0.14
YBX3-204ENST00000366290 RBM33Q96EV2 1170 aaKnown RBP14.16□□□□□ -0.14
YBX3-204ENST00000366290 MAP2K5Q13163 448 aa14.15□□□□□ -0.14
YBX3-204ENST00000366290 CDHR5Q9HBB8 845 aa14.15□□□□□ -0.14
YBX3-204ENST00000366290 MINK1Q8N4C8 1332 aaPredicted RBP14.15□□□□□ -0.15
YBX3-204ENST00000366290 TK2O00142 265 aa14.14□□□□□ -0.15
YBX3-204ENST00000366290 PTPREP23469 700 aa14.14□□□□□ -0.15
YBX3-204ENST00000366290 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
YBX3-204ENST00000366290 TRIM66O15016 1216 aa14.13□□□□□ -0.15
YBX3-204ENST00000366290 FECHP22830 423 aa14.13□□□□□ -0.15
YBX3-204ENST00000366290 TMEM132AQ24JP5 1023 aa14.13□□□□□ -0.15
YBX3-204ENST00000366290 FBXW7Q969H0 707 aa14.13□□□□□ -0.15
YBX3-204ENST00000366290 KCNH8Q96L42 1107 aa14.12□□□□□ -0.15
YBX3-204ENST00000366290 MYT1LQ9UL68 1186 aa14.12□□□□□ -0.15
YBX3-204ENST00000366290 HRO43593 1189 aa14.11□□□□□ -0.15
YBX3-204ENST00000366290 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
YBX3-204ENST00000366290 CADPSQ9ULU8 1353 aa14.1□□□□□ -0.15
YBX3-204ENST00000366290 IRF6O14896 467 aa14.1□□□□□ -0.15
YBX3-204ENST00000366290 TSR1Q2NL82 804 aaKnown RBP14.1□□□□□ -0.15
YBX3-204ENST00000366290 CCDC102AQ96A19 550 aa14.1□□□□□ -0.15
YBX3-204ENST00000366290 NPDC1Q9NQX5 325 aaPredicted RBP14.1□□□□□ -0.15
YBX3-204ENST00000366290 RNF166Q96A37 237 aaPredicted RBP14.09□□□□□ -0.15
YBX3-204ENST00000366290 ZBED2Q9BTP6 218 aa14.08□□□□□ -0.16
YBX3-204ENST00000366290 SLC4A5Q9BY07 1137 aa14.08□□□□□ -0.16
YBX3-204ENST00000366290 VPS9D1Q9Y2B5 631 aa14.08□□□□□ -0.16
YBX3-204ENST00000366290 PDE4DQ08499 809 aa14.07□□□□□ -0.16
YBX3-204ENST00000366290 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
YBX3-204ENST00000366290 COL9A1P20849 921 aa14.06□□□□□ -0.16
YBX3-204ENST00000366290 PPP1R3GB7ZBB8 358 aa14.05□□□□□ -0.16
YBX3-204ENST00000366290 GPBP1L1Q9HC44 474 aaPredicted RBP14.05□□□□□ -0.16
YBX3-204ENST00000366290 C6orf132Q5T0Z8 1188 aa14.03□□□□□ -0.16
YBX3-204ENST00000366290 CFTRP13569 1480 aa14.03□□□□□ -0.16
YBX3-204ENST00000366290 KDM4CQ9H3R0 1056 aa14□□□□□ -0.17
YBX3-204ENST00000366290 BHMG1C9JSJ3 638 aaPredicted RBP13.99□□□□□ -0.17
YBX3-204ENST00000366290 AMHR2Q16671 573 aa13.99□□□□□ -0.17
YBX3-204ENST00000366290 CERKQ8TCT0 537 aa13.99□□□□□ -0.17
YBX3-204ENST00000366290 PROX2Q3B8N5 592 aa13.98□□□□□ -0.17
YBX3-204ENST00000366290 CCDC88BA6NC98 1476 aa13.96□□□□□ -0.17
YBX3-204ENST00000366290 MRC2Q9UBG0 1479 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms