RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 GNPATO15228 680 aa9.6□□□□□ -0.87
RNU6-560P-201ENST00000364007 FAM163AQ96GL9 167 aaPredicted RBP9.6□□□□□ -0.87
RNU6-560P-201ENST00000364007 HIC1Q14526 733 aa9.59□□□□□ -0.87
RNU6-560P-201ENST00000364007 PPP4R3BQ5MIZ7 849 aa9.59□□□□□ -0.87
RNU6-560P-201ENST00000364007 MARVELD3Q96A59 401 aa9.57□□□□□ -0.88
RNU6-560P-201ENST00000364007 PSDA5PKW4 1024 aaPredicted RBP9.56□□□□□ -0.88
RNU6-560P-201ENST00000364007 AK7Q96M32 723 aa9.55□□□□□ -0.88
RNU6-560P-201ENST00000364007 ERBB3P21860 1342 aa9.55□□□□□ -0.88
RNU6-560P-201ENST00000364007 MINK1Q8N4C8 1332 aaPredicted RBP9.55□□□□□ -0.88
RNU6-560P-201ENST00000364007 IRF6O14896 467 aa9.54□□□□□ -0.88
RNU6-560P-201ENST00000364007 COL9A1P20849 921 aa9.54□□□□□ -0.88
RNU6-560P-201ENST00000364007 MAP2K5Q13163 448 aa9.54□□□□□ -0.88
RNU6-560P-201ENST00000364007 BCL2L12Q9HB09 334 aa9.54□□□□□ -0.88
RNU6-560P-201ENST00000364007 VARS2Q5ST30 1063 aaKnown RBP9.53□□□□□ -0.88
RNU6-560P-201ENST00000364007 TRIM66O15016 1216 aa9.52□□□□□ -0.89
RNU6-560P-201ENST00000364007 EMP3P54852 163 aa9.52□□□□□ -0.89
RNU6-560P-201ENST00000364007 LCE2DQ5TA82 110 aaPredicted RBP9.52□□□□□ -0.89
RNU6-560P-201ENST00000364007 CCDC102AQ96A19 550 aa9.52□□□□□ -0.89
RNU6-560P-201ENST00000364007 FAM205CA6NFA0 338 aa9.51□□□□□ -0.89
RNU6-560P-201ENST00000364007 PTPREP23469 700 aa9.51□□□□□ -0.89
RNU6-560P-201ENST00000364007 BRPF1P55201 1214 aaPredicted RBP9.51□□□□□ -0.89
RNU6-560P-201ENST00000364007 PADI6Q6TGC4 694 aa9.51□□□□□ -0.89
RNU6-560P-201ENST00000364007 FAM161AQ3B820 660 aa9.5□□□□□ -0.89
RNU6-560P-201ENST00000364007 POTEEQ6S8J3 1075 aa9.5□□□□□ -0.89
RNU6-560P-201ENST00000364007 CERKQ8TCT0 537 aa9.5□□□□□ -0.89
RNU6-560P-201ENST00000364007 POTEB3A0JP26 581 aa9.49□□□□□ -0.89
RNU6-560P-201ENST00000364007 POTEBQ6S5H4 581 aa9.49□□□□□ -0.89
RNU6-560P-201ENST00000364007 PSEN2P49810 448 aa9.48□□□□□ -0.89
RNU6-560P-201ENST00000364007 PRSS12P56730 875 aa9.48□□□□□ -0.89
RNU6-560P-201ENST00000364007 NEUROD2Q15784 382 aa9.48□□□□□ -0.89
RNU6-560P-201ENST00000364007 CDCA7LQ96GN5 454 aa9.48□□□□□ -0.89
RNU6-560P-201ENST00000364007 KCNK17Q96T54 332 aa9.48□□□□□ -0.89
RNU6-560P-201ENST00000364007 FAM198AQ9UFP1 575 aa9.48□□□□□ -0.89
RNU6-560P-201ENST00000364007 PPP1R3GB7ZBB8 358 aa9.47□□□□□ -0.89
RNU6-560P-201ENST00000364007 PDE4DQ08499 809 aa9.47□□□□□ -0.89
RNU6-560P-201ENST00000364007 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
RNU6-560P-201ENST00000364007 TTC13Q8NBP0 860 aa9.46□□□□□ -0.9
RNU6-560P-201ENST00000364007 GPBP1L1Q9HC44 474 aaPredicted RBP9.46□□□□□ -0.9
RNU6-560P-201ENST00000364007 TSKSQ9UJT2 592 aa9.45□□□□□ -0.9
RNU6-560P-201ENST00000364007 PROX2Q3B8N5 592 aa9.44□□□□□ -0.9
RNU6-560P-201ENST00000364007 HS3ST6Q96QI5 342 aa9.44□□□□□ -0.9
RNU6-560P-201ENST00000364007 PHOX2BQ99453 314 aa9.44□□□□□ -0.9
RNU6-560P-201ENST00000364007 C3orf80F5H4A9 247 aa9.43□□□□□ -0.9
RNU6-560P-201ENST00000364007 ARHGAP33O14559 1287 aa9.43□□□□□ -0.9
RNU6-560P-201ENST00000364007 DMRTA1Q5VZB9 504 aa9.43□□□□□ -0.9
RNU6-560P-201ENST00000364007 ZNF687Q8N1G0 1237 aa9.43□□□□□ -0.9
RNU6-560P-201ENST00000364007 RBM27Q9P2N5 1060 aaKnown RBP9.43□□□□□ -0.9
RNU6-560P-201ENST00000364007 ADGRG1Q9Y653 693 aa9.43□□□□□ -0.9
RNU6-560P-201ENST00000364007 TRIM6-TRIM34B2RNG4 842 aa9.41□□□□□ -0.9
RNU6-560P-201ENST00000364007 AMHR2Q16671 573 aa9.41□□□□□ -0.9
RNU6-560P-201ENST00000364007 NLRP7Q8WX94 980 aa9.41□□□□□ -0.9
RNU6-560P-201ENST00000364007 ZBED2Q9BTP6 218 aa9.41□□□□□ -0.9
RNU6-560P-201ENST00000364007 METTL3Q86U44 580 aaKnown RBP9.4□□□□□ -0.9
RNU6-560P-201ENST00000364007 REPIN1Q9BWE0 567 aaKnown RBP9.4□□□□□ -0.9
RNU6-560P-201ENST00000364007 OATP04181 439 aa9.39□□□□□ -0.91
RNU6-560P-201ENST00000364007 PXYLP1Q8TE99 480 aa9.39□□□□□ -0.91
RNU6-560P-201ENST00000364007 KCNH8Q96L42 1107 aa9.39□□□□□ -0.91
RNU6-560P-201ENST00000364007 KDM4CQ9H3R0 1056 aa9.39□□□□□ -0.91
RNU6-560P-201ENST00000364007 NUDT18Q6ZVK8 323 aa9.38□□□□□ -0.91
RNU6-560P-201ENST00000364007 PARP9Q8IXQ6 854 aa9.38□□□□□ -0.91
RNU6-560P-201ENST00000364007 SMAPO00193 183 aa9.37□□□□□ -0.91
RNU6-560P-201ENST00000364007 MDM2Q00987 491 aaPredicted RBP9.37□□□□□ -0.91
RNU6-560P-201ENST00000364007 TATDN2Q93075 761 aa9.37□□□□□ -0.91
RNU6-560P-201ENST00000364007 EYA1Q99502 592 aa9.37□□□□□ -0.91
RNU6-560P-201ENST00000364007 KIAA1468Q9P260 1216 aa9.37□□□□□ -0.91
RNU6-560P-201ENST00000364007 PNMA3Q9UL41 463 aa9.37□□□□□ -0.91
RNU6-560P-201ENST00000364007 TTLL12Q14166 644 aaPredicted RBP9.36□□□□□ -0.91
RNU6-560P-201ENST00000364007 PACS2Q86VP3 889 aa9.36□□□□□ -0.91
RNU6-560P-201ENST00000364007 RBM46Q8TBY0 533 aaKnown RBP9.36□□□□□ -0.91
RNU6-560P-201ENST00000364007 ONECUT3O60422 494 aaPredicted RBP9.35□□□□□ -0.91
RNU6-560P-201ENST00000364007 PBX2P40425 430 aa9.35□□□□□ -0.91
RNU6-560P-201ENST00000364007 IL27Q8NEV9 243 aa9.34□□□□□ -0.91
RNU6-560P-201ENST00000364007 TMUB1Q9BVT8 246 aa9.34□□□□□ -0.91
RNU6-560P-201ENST00000364007 VPS9D1Q9Y2B5 631 aa9.34□□□□□ -0.91
RNU6-560P-201ENST00000364007 RCCD1A6NED2 376 aa9.33□□□□□ -0.92
RNU6-560P-201ENST00000364007 GIGYF2Q6Y7W6 1299 aaKnown RBP9.33□□□□□ -0.92
RNU6-560P-201ENST00000364007 SLC4A5Q9BY07 1137 aa9.33□□□□□ -0.92
RNU6-560P-201ENST00000364007 NBPF26B4DH59 902 aa9.32□□□□□ -0.92
RNU6-560P-201ENST00000364007 FAM117AQ9C073 453 aa9.32□□□□□ -0.92
RNU6-560P-201ENST00000364007 RABGEF1Q9UJ41 708 aa9.32□□□□□ -0.92
RNU6-560P-201ENST00000364007 MS4A1P11836 297 aa9.31□□□□□ -0.92
RNU6-560P-201ENST00000364007 CLCN1P35523 988 aa9.31□□□□□ -0.92
RNU6-560P-201ENST00000364007 TMEM132AQ24JP5 1023 aa9.31□□□□□ -0.92
RNU6-560P-201ENST00000364007 GPCPD1Q9NPB8 672 aa9.31□□□□□ -0.92
RNU6-560P-201ENST00000364007 SEPT9Q9UHD8 586 aaPredicted RBP9.31□□□□□ -0.92
RNU6-560P-201ENST00000364007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.29□□□□□ -0.92
RNU6-560P-201ENST00000364007 SSTR3P32745 418 aaPredicted RBP9.29□□□□□ -0.92
RNU6-560P-201ENST00000364007 LSM11P83369 360 aaKnown RBP eCLIP9.29□□□□□ -0.92
RNU6-560P-201ENST00000364007 BHMG1C9JSJ3 638 aaPredicted RBP9.27□□□□□ -0.93
RNU6-560P-201ENST00000364007 DNAJB2P25686 324 aa9.27□□□□□ -0.93
RNU6-560P-201ENST00000364007 ANKRD13DQ6ZTN6 518 aa9.27□□□□□ -0.93
RNU6-560P-201ENST00000364007 FAM217BQ9NTX9 383 aaPredicted RBP9.27□□□□□ -0.93
RNU6-560P-201ENST00000364007 DAXXQ9UER7 740 aaPredicted RBP9.27□□□□□ -0.93
RNU6-560P-201ENST00000364007 PLEKHG3A1L390 1219 aa9.26□□□□□ -0.93
RNU6-560P-201ENST00000364007 TK2O00142 265 aa9.26□□□□□ -0.93
RNU6-560P-201ENST00000364007 ADGRD1Q6QNK2 874 aa9.26□□□□□ -0.93
RNU6-560P-201ENST00000364007 TMEM134Q9H6X4 195 aa9.26□□□□□ -0.93
RNU6-560P-201ENST00000364007 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
RNU6-560P-201ENST00000364007 KRTAP3-2Q9BYR7 98 aa9.24□□□□□ -0.93
RNU6-560P-201ENST00000364007 HRO43593 1189 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms