RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 HPS5Q9UPZ3 1129 aa3.73□□□□□ -1.81
RNU6-478P-201ENST00000363904 CIZ1Q9ULV3 898 aaPredicted RBP3.72□□□□□ -1.81
RNU6-478P-201ENST00000363904 PRR20EP86478 221 aa3.71□□□□□ -1.82
RNU6-478P-201ENST00000363904 PRR20CP86479 221 aa3.71□□□□□ -1.82
RNU6-478P-201ENST00000363904 PRR20DP86480 221 aa3.71□□□□□ -1.82
RNU6-478P-201ENST00000363904 PRR20BP86481 221 aa3.71□□□□□ -1.82
RNU6-478P-201ENST00000363904 PRR20AP86496 221 aa3.71□□□□□ -1.82
RNU6-478P-201ENST00000363904 TJAP1Q5JTD0 557 aa3.71□□□□□ -1.82
RNU6-478P-201ENST00000363904 IL21Q9HBE4 155 aa3.71□□□□□ -1.82
RNU6-478P-201ENST00000363904 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.71□□□□□ -1.82
RNU6-478P-201ENST00000363904 BTBD11A6QL63 1104 aa3.7□□□□□ -1.82
RNU6-478P-201ENST00000363904 SLC19A1P41440 591 aa3.7□□□□□ -1.82
RNU6-478P-201ENST00000363904 LCE2CQ5TA81 110 aa3.7□□□□□ -1.82
RNU6-478P-201ENST00000363904 SLC16A10Q8TF71 515 aa3.7□□□□□ -1.82
RNU6-478P-201ENST00000363904 LRCH3Q96II8 777 aa3.7□□□□□ -1.82
RNU6-478P-201ENST00000363904 KCNMA1Q12791 1236 aa3.69□□□□□ -1.82
RNU6-478P-201ENST00000363904 LCE3BQ5TA77 95 aa3.69□□□□□ -1.82
RNU6-478P-201ENST00000363904 TMEM151AQ8N4L1 468 aa3.69□□□□□ -1.82
RNU6-478P-201ENST00000363904 TNFRSF10AO00220 468 aa3.68□□□□□ -1.82
RNU6-478P-201ENST00000363904 PPP4CP60510 307 aa3.68□□□□□ -1.82
RNU6-478P-201ENST00000363904 MTRQ99707 1265 aa3.68□□□□□ -1.82
RNU6-478P-201ENST00000363904 DACH1Q9UI36 760 aa3.68□□□□□ -1.82
RNU6-478P-201ENST00000363904 PROX2Q3B8N5 592 aa3.67□□□□□ -1.82
RNU6-478P-201ENST00000363904 AXIN1O15169 862 aa3.66□□□□□ -1.82
RNU6-478P-201ENST00000363904 GDF11O95390 407 aa3.66□□□□□ -1.82
RNU6-478P-201ENST00000363904 GMPRP36959 345 aa3.66□□□□□ -1.82
RNU6-478P-201ENST00000363904 ZNF598Q86UK7 904 aaKnown RBP3.66□□□□□ -1.82
RNU6-478P-201ENST00000363904 TMUB1Q9BVT8 246 aa3.66□□□□□ -1.82
RNU6-478P-201ENST00000363904 PPP1R3GB7ZBB8 358 aa3.65□□□□□ -1.83
RNU6-478P-201ENST00000363904 LORP23490 312 aaPredicted RBP3.65□□□□□ -1.83
RNU6-478P-201ENST00000363904 FOSBP53539 338 aa3.65□□□□□ -1.83
RNU6-478P-201ENST00000363904 SPRYD7Q5W111 196 aa3.65□□□□□ -1.83
RNU6-478P-201ENST00000363904 CRIPAKQ8N1N5 446 aa3.65□□□□□ -1.83
RNU6-478P-201ENST00000363904 SEPT9Q9UHD8 586 aaPredicted RBP3.65□□□□□ -1.83
RNU6-478P-201ENST00000363904 ZNF697Q5TEC3 545 aa3.64□□□□□ -1.83
RNU6-478P-201ENST00000363904 PLPP6Q8IY26 295 aa3.64□□□□□ -1.83
RNU6-478P-201ENST00000363904 FBXO22Q8NEZ5 403 aa3.64□□□□□ -1.83
RNU6-478P-201ENST00000363904 ZNF516Q92618 1163 aa3.64□□□□□ -1.83
RNU6-478P-201ENST00000363904 ZDHHC16Q969W1 377 aa3.64□□□□□ -1.83
RNU6-478P-201ENST00000363904 ADAM33Q9BZ11 813 aa3.64□□□□□ -1.83
RNU6-478P-201ENST00000363904 KIAA1468Q9P260 1216 aa3.64□□□□□ -1.83
RNU6-478P-201ENST00000363904 FAM98CQ17RN3 349 aaKnown RBP3.63□□□□□ -1.83
RNU6-478P-201ENST00000363904 GPAT2Q6NUI2 795 aa3.63□□□□□ -1.83
RNU6-478P-201ENST00000363904 NKX2-3Q8TAU0 364 aa3.63□□□□□ -1.83
RNU6-478P-201ENST00000363904 CSRNP3Q8WYN3 585 aa3.63□□□□□ -1.83
RNU6-478P-201ENST00000363904 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.62□□□□□ -1.83
RNU6-478P-201ENST00000363904 IGHA1P01876 353 aa3.62□□□□□ -1.83
RNU6-478P-201ENST00000363904 RASSF7Q02833 373 aa3.62□□□□□ -1.83
RNU6-478P-201ENST00000363904 IRF7Q92985 503 aa3.62□□□□□ -1.83
RNU6-478P-201ENST00000363904 JPH4Q96JJ6 628 aa3.62□□□□□ -1.83
RNU6-478P-201ENST00000363904 ZFP91Q96JP5 570 aaPredicted RBP3.62□□□□□ -1.83
RNU6-478P-201ENST00000363904 GDF9O60383 454 aa3.61□□□□□ -1.83
RNU6-478P-201ENST00000363904 SNRPBP14678 240 aaKnown RBP3.61□□□□□ -1.83
RNU6-478P-201ENST00000363904 CTC1Q2NKJ3 1217 aa3.61□□□□□ -1.83
RNU6-478P-201ENST00000363904 KRTAP4-8A0A0G2JLE6 195 aa3.6□□□□□ -1.83
RNU6-478P-201ENST00000363904 RNF225M0QZC1 329 aaPredicted RBP3.6□□□□□ -1.83
RNU6-478P-201ENST00000363904 GSK3AP49840 483 aa3.6□□□□□ -1.83
RNU6-478P-201ENST00000363904 FOXK1P85037 733 aa3.6□□□□□ -1.83
RNU6-478P-201ENST00000363904 UPF1Q92900 1129 aaKnown RBP eCLIP3.6□□□□□ -1.83
RNU6-478P-201ENST00000363904 SENP2Q9HC62 589 aa3.6□□□□□ -1.83
RNU6-478P-201ENST00000363904 FBXO3Q9UK99 471 aa3.6□□□□□ -1.83
RNU6-478P-201ENST00000363904 TRIM41Q8WV44 630 aa3.59□□□□□ -1.83
RNU6-478P-201ENST00000363904 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
RNU6-478P-201ENST00000363904 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
RNU6-478P-201ENST00000363904 ONECUT3O60422 494 aaPredicted RBP3.58□□□□□ -1.84
RNU6-478P-201ENST00000363904 AVPP01185 164 aa3.58□□□□□ -1.84
RNU6-478P-201ENST00000363904 RNF223E7ERA6 249 aa3.57□□□□□ -1.84
RNU6-478P-201ENST00000363904 RIOK3O14730 519 aaKnown RBP3.57□□□□□ -1.84
RNU6-478P-201ENST00000363904 VGFO15240 615 aaPredicted RBP3.57□□□□□ -1.84
RNU6-478P-201ENST00000363904 COL9A1P20849 921 aa3.57□□□□□ -1.84
RNU6-478P-201ENST00000363904 FOXC1Q12948 553 aa3.57□□□□□ -1.84
RNU6-478P-201ENST00000363904 TRIM47Q96LD4 638 aa3.57□□□□□ -1.84
RNU6-478P-201ENST00000363904 NXF1Q9UBU9 619 aaKnown RBP3.57□□□□□ -1.84
RNU6-478P-201ENST00000363904 SMCPP49901 116 aaPredicted RBP3.56□□□□□ -1.84
RNU6-478P-201ENST00000363904 OXER1Q8TDS5 423 aa3.56□□□□□ -1.84
RNU6-478P-201ENST00000363904 SPOCK2Q92563 424 aa3.56□□□□□ -1.84
RNU6-478P-201ENST00000363904 EMID1Q96A84 441 aaPredicted RBP3.56□□□□□ -1.84
RNU6-478P-201ENST00000363904 KIFC2Q96AC6 838 aa3.56□□□□□ -1.84
RNU6-478P-201ENST00000363904 MFRPQ9BY79 579 aa3.56□□□□□ -1.84
RNU6-478P-201ENST00000363904 ATP13A2Q9NQ11 1180 aa3.56□□□□□ -1.84
RNU6-478P-201ENST00000363904 ADAM23O75077 832 aa3.55□□□□□ -1.84
RNU6-478P-201ENST00000363904 COPS2P61201 443 aa3.55□□□□□ -1.84
RNU6-478P-201ENST00000363904 LIAT1Q6ZQX7 453 aa3.55□□□□□ -1.84
RNU6-478P-201ENST00000363904 Q8N3U1 123 aa3.55□□□□□ -1.84
RNU6-478P-201ENST00000363904 FOXK2Q01167 660 aa3.54□□□□□ -1.84
RNU6-478P-201ENST00000363904 DSG2Q14126 1118 aa3.54□□□□□ -1.84
RNU6-478P-201ENST00000363904 LMOD2Q6P5Q4 547 aa3.54□□□□□ -1.84
RNU6-478P-201ENST00000363904 CYP4X1Q8N118 509 aa3.54□□□□□ -1.84
RNU6-478P-201ENST00000363904 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
RNU6-478P-201ENST00000363904 DNMT3AQ9Y6K1 912 aaPredicted RBP3.54□□□□□ -1.84
RNU6-478P-201ENST00000363904 VASPP50552 380 aaPredicted RBP3.53□□□□□ -1.84
RNU6-478P-201ENST00000363904 NPAS3Q8IXF0 933 aa3.53□□□□□ -1.84
RNU6-478P-201ENST00000363904 ANKLE1Q8NAG6 615 aa3.53□□□□□ -1.84
RNU6-478P-201ENST00000363904 GPHNQ9NQX3 736 aaPredicted RBP3.53□□□□□ -1.84
RNU6-478P-201ENST00000363904 TRIM6-TRIM34B2RNG4 842 aa3.52□□□□□ -1.85
RNU6-478P-201ENST00000363904 RNF40O75150 1001 aa3.52□□□□□ -1.85
RNU6-478P-201ENST00000363904 VEGFBP49765 207 aa3.52□□□□□ -1.85
RNU6-478P-201ENST00000363904 SAMD7Q7Z3H4 446 aa3.52□□□□□ -1.85
RNU6-478P-201ENST00000363904 BCL11BQ9C0K0 894 aaPredicted RBP3.52□□□□□ -1.85
RNU6-478P-201ENST00000363904 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms