RNA–Protein interactions for RNA: ENST00000363727.1

RNU1-87P-201, Transcript of RNA, U1 small nuclear 87, pseudogene, humanhuman

BASIC

Gene RNU1-87P, Length 170 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-87P-201ENST00000363727 ADAM33Q9BZ11 813 aa9.77□□□□□ -0.85
RNU1-87P-201ENST00000363727 HOXB1P14653 301 aaPredicted RBP9.76□□□□□ -0.85
RNU1-87P-201ENST00000363727 C6orf132Q5T0Z8 1188 aa9.76□□□□□ -0.85
RNU1-87P-201ENST00000363727 NPDC1Q9NQX5 325 aaPredicted RBP9.76□□□□□ -0.85
RNU1-87P-201ENST00000363727 MAP2K5Q13163 448 aa9.75□□□□□ -0.85
RNU1-87P-201ENST00000363727 CCDC102AQ96A19 550 aa9.75□□□□□ -0.85
RNU1-87P-201ENST00000363727 PPP4R3BQ5MIZ7 849 aa9.74□□□□□ -0.85
RNU1-87P-201ENST00000363727 MINK1Q8N4C8 1332 aaPredicted RBP9.74□□□□□ -0.85
RNU1-87P-201ENST00000363727 IRF6O14896 467 aa9.73□□□□□ -0.85
RNU1-87P-201ENST00000363727 TRIM66O15016 1216 aa9.73□□□□□ -0.85
RNU1-87P-201ENST00000363727 GPBP1L1Q9HC44 474 aaPredicted RBP9.72□□□□□ -0.85
RNU1-87P-201ENST00000363727 PSDA5PKW4 1024 aaPredicted RBP9.69□□□□□ -0.86
RNU1-87P-201ENST00000363727 PDE4DQ08499 809 aa9.69□□□□□ -0.86
RNU1-87P-201ENST00000363727 FAM161AQ3B820 660 aa9.69□□□□□ -0.86
RNU1-87P-201ENST00000363727 PADI6Q6TGC4 694 aa9.69□□□□□ -0.86
RNU1-87P-201ENST00000363727 COL9A1P20849 921 aa9.68□□□□□ -0.86
RNU1-87P-201ENST00000363727 ST18O60284 1047 aa9.67□□□□□ -0.86
RNU1-87P-201ENST00000363727 MARVELD3Q96A59 401 aa9.67□□□□□ -0.86
RNU1-87P-201ENST00000363727 FAM163AQ96GL9 167 aaPredicted RBP9.67□□□□□ -0.86
RNU1-87P-201ENST00000363727 BCL2L12Q9HB09 334 aa9.67□□□□□ -0.86
RNU1-87P-201ENST00000363727 ERBB3P21860 1342 aa9.66□□□□□ -0.86
RNU1-87P-201ENST00000363727 PTPREP23469 700 aa9.66□□□□□ -0.86
RNU1-87P-201ENST00000363727 CERKQ8TCT0 537 aa9.66□□□□□ -0.86
RNU1-87P-201ENST00000363727 EMP3P54852 163 aa9.65□□□□□ -0.86
RNU1-87P-201ENST00000363727 VARS2Q5ST30 1063 aaKnown RBP9.65□□□□□ -0.86
RNU1-87P-201ENST00000363727 KCNK17Q96T54 332 aa9.65□□□□□ -0.86
RNU1-87P-201ENST00000363727 PRSS12P56730 875 aa9.64□□□□□ -0.87
RNU1-87P-201ENST00000363727 CDCA7LQ96GN5 454 aa9.64□□□□□ -0.87
RNU1-87P-201ENST00000363727 KDM4CQ9H3R0 1056 aa9.64□□□□□ -0.87
RNU1-87P-201ENST00000363727 TTLL12Q14166 644 aaPredicted RBP9.63□□□□□ -0.87
RNU1-87P-201ENST00000363727 NLRP7Q8WX94 980 aa9.62□□□□□ -0.87
RNU1-87P-201ENST00000363727 PPP1R3GB7ZBB8 358 aa9.61□□□□□ -0.87
RNU1-87P-201ENST00000363727 AMHR2Q16671 573 aa9.61□□□□□ -0.87
RNU1-87P-201ENST00000363727 TMEM132AQ24JP5 1023 aa9.61□□□□□ -0.87
RNU1-87P-201ENST00000363727 PARP9Q8IXQ6 854 aa9.61□□□□□ -0.87
RNU1-87P-201ENST00000363727 PHOX2BQ99453 314 aa9.61□□□□□ -0.87
RNU1-87P-201ENST00000363727 FAM205CA6NFA0 338 aa9.6□□□□□ -0.87
RNU1-87P-201ENST00000363727 PSEN2P49810 448 aa9.6□□□□□ -0.87
RNU1-87P-201ENST00000363727 IL27Q8NEV9 243 aa9.6□□□□□ -0.87
RNU1-87P-201ENST00000363727 FAM198AQ9UFP1 575 aa9.6□□□□□ -0.87
RNU1-87P-201ENST00000363727 ADGRG1Q9Y653 693 aa9.6□□□□□ -0.87
RNU1-87P-201ENST00000363727 MDM2Q00987 491 aaPredicted RBP9.59□□□□□ -0.87
RNU1-87P-201ENST00000363727 PROX2Q3B8N5 592 aa9.59□□□□□ -0.87
RNU1-87P-201ENST00000363727 KCNH8Q96L42 1107 aa9.59□□□□□ -0.87
RNU1-87P-201ENST00000363727 RBM27Q9P2N5 1060 aaKnown RBP9.59□□□□□ -0.87
RNU1-87P-201ENST00000363727 AXIN2Q9Y2T1 843 aa9.59□□□□□ -0.87
RNU1-87P-201ENST00000363727 OATP04181 439 aa9.58□□□□□ -0.88
RNU1-87P-201ENST00000363727 METTL3Q86U44 580 aaKnown RBP9.58□□□□□ -0.88
RNU1-87P-201ENST00000363727 TTC13Q8NBP0 860 aa9.58□□□□□ -0.88
RNU1-87P-201ENST00000363727 TSKSQ9UJT2 592 aa9.58□□□□□ -0.88
RNU1-87P-201ENST00000363727 C3orf80F5H4A9 247 aa9.56□□□□□ -0.88
RNU1-87P-201ENST00000363727 REPIN1Q9BWE0 567 aaKnown RBP9.56□□□□□ -0.88
RNU1-87P-201ENST00000363727 TRIM6-TRIM34B2RNG4 842 aa9.55□□□□□ -0.88
RNU1-87P-201ENST00000363727 POTEEQ6S8J3 1075 aa9.55□□□□□ -0.88
RNU1-87P-201ENST00000363727 GIGYF2Q6Y7W6 1299 aaKnown RBP9.55□□□□□ -0.88
RNU1-87P-201ENST00000363727 NUDT18Q6ZVK8 323 aa9.55□□□□□ -0.88
RNU1-87P-201ENST00000363727 RBM46Q8TBY0 533 aaKnown RBP9.55□□□□□ -0.88
RNU1-87P-201ENST00000363727 PXYLP1Q8TE99 480 aa9.55□□□□□ -0.88
RNU1-87P-201ENST00000363727 FAM117AQ9C073 453 aa9.55□□□□□ -0.88
RNU1-87P-201ENST00000363727 SMAPO00193 183 aa9.54□□□□□ -0.88
RNU1-87P-201ENST00000363727 ARHGAP33O14559 1287 aa9.54□□□□□ -0.88
RNU1-87P-201ENST00000363727 DMRTA1Q5VZB9 504 aa9.54□□□□□ -0.88
RNU1-87P-201ENST00000363727 PACS2Q86VP3 889 aa9.54□□□□□ -0.88
RNU1-87P-201ENST00000363727 PNMA3Q9UL41 463 aa9.54□□□□□ -0.88
RNU1-87P-201ENST00000363727 CLCN1P35523 988 aa9.53□□□□□ -0.88
RNU1-87P-201ENST00000363727 HS3ST6Q96QI5 342 aa9.53□□□□□ -0.88
RNU1-87P-201ENST00000363727 GPCPD1Q9NPB8 672 aa9.53□□□□□ -0.88
RNU1-87P-201ENST00000363727 POTEB3A0JP26 581 aa9.52□□□□□ -0.89
RNU1-87P-201ENST00000363727 NBPF26B4DH59 902 aa9.52□□□□□ -0.89
RNU1-87P-201ENST00000363727 MS4A1P11836 297 aa9.52□□□□□ -0.89
RNU1-87P-201ENST00000363727 POTEBQ6S5H4 581 aa9.52□□□□□ -0.89
RNU1-87P-201ENST00000363727 TATDN2Q93075 761 aa9.52□□□□□ -0.89
RNU1-87P-201ENST00000363727 ZBED2Q9BTP6 218 aa9.52□□□□□ -0.89
RNU1-87P-201ENST00000363727 KIAA1468Q9P260 1216 aa9.52□□□□□ -0.89
RNU1-87P-201ENST00000363727 LCE2DQ5TA82 110 aaPredicted RBP9.51□□□□□ -0.89
RNU1-87P-201ENST00000363727 RCCD1A6NED2 376 aa9.5□□□□□ -0.89
RNU1-87P-201ENST00000363727 ZNF687Q8N1G0 1237 aa9.5□□□□□ -0.89
RNU1-87P-201ENST00000363727 EYA1Q99502 592 aa9.5□□□□□ -0.89
RNU1-87P-201ENST00000363727 TMUB1Q9BVT8 246 aa9.49□□□□□ -0.89
RNU1-87P-201ENST00000363727 SSTR3P32745 418 aaPredicted RBP9.48□□□□□ -0.89
RNU1-87P-201ENST00000363727 SEPT9Q9UHD8 586 aaPredicted RBP9.48□□□□□ -0.89
RNU1-87P-201ENST00000363727 GTF3C3Q9Y5Q9 886 aa9.48□□□□□ -0.89
RNU1-87P-201ENST00000363727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.47□□□□□ -0.89
RNU1-87P-201ENST00000363727 PLEKHG3A1L390 1219 aa9.47□□□□□ -0.89
RNU1-87P-201ENST00000363727 PBX2P40425 430 aa9.47□□□□□ -0.89
RNU1-87P-201ENST00000363727 DDRGK1Q96HY6 314 aa9.47□□□□□ -0.89
RNU1-87P-201ENST00000363727 FAM217BQ9NTX9 383 aaPredicted RBP9.46□□□□□ -0.9
RNU1-87P-201ENST00000363727 DNAJB2P25686 324 aa9.45□□□□□ -0.9
RNU1-87P-201ENST00000363727 VPS9D1Q9Y2B5 631 aa9.45□□□□□ -0.9
RNU1-87P-201ENST00000363727 ONECUT3O60422 494 aaPredicted RBP9.44□□□□□ -0.9
RNU1-87P-201ENST00000363727 BEGAINQ9BUH8 593 aa9.44□□□□□ -0.9
RNU1-87P-201ENST00000363727 RABGEF1Q9UJ41 708 aa9.44□□□□□ -0.9
RNU1-87P-201ENST00000363727 DDX11L8A8MPP1 907 aa9.43□□□□□ -0.9
RNU1-87P-201ENST00000363727 DAXXQ9UER7 740 aaPredicted RBP9.43□□□□□ -0.9
RNU1-87P-201ENST00000363727 TMEM134Q9H6X4 195 aa9.42□□□□□ -0.9
RNU1-87P-201ENST00000363727 SLC4A5Q9BY07 1137 aa9.41□□□□□ -0.9
RNU1-87P-201ENST00000363727 LSM11P83369 360 aaKnown RBP eCLIP9.4□□□□□ -0.9
RNU1-87P-201ENST00000363727 ANKRD13DQ6ZTN6 518 aa9.4□□□□□ -0.9
RNU1-87P-201ENST00000363727 SWT1Q5T5J6 900 aaKnown RBP9.39□□□□□ -0.91
RNU1-87P-201ENST00000363727 ATP1B4Q9UN42 357 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms