RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 PCDHGA10Q9Y5H3 936 aa8.71□□□□□ -1.02
RNU6-1339P-201ENST00000363574 RBM33Q96EV2 1170 aaKnown RBP8.7□□□□□ -1.02
RNU6-1339P-201ENST00000363574 UBTFP17480 764 aaKnown RBP8.69□□□□□ -1.02
RNU6-1339P-201ENST00000363574 CLCN1P35523 988 aa8.69□□□□□ -1.02
RNU6-1339P-201ENST00000363574 TSR1Q2NL82 804 aaKnown RBP8.69□□□□□ -1.02
RNU6-1339P-201ENST00000363574 PCMTD1Q96MG8 357 aaPredicted RBP8.69□□□□□ -1.02
RNU6-1339P-201ENST00000363574 PHOX2BQ99453 314 aa8.69□□□□□ -1.02
RNU6-1339P-201ENST00000363574 METRNQ9UJH8 293 aa8.69□□□□□ -1.02
RNU6-1339P-201ENST00000363574 MDM2Q00987 491 aaPredicted RBP8.68□□□□□ -1.02
RNU6-1339P-201ENST00000363574 SH3D19Q5HYK7 790 aa8.68□□□□□ -1.02
RNU6-1339P-201ENST00000363574 SLAIN1Q8ND83 568 aa8.68□□□□□ -1.02
RNU6-1339P-201ENST00000363574 C1orf115Q9H7X2 142 aa8.68□□□□□ -1.02
RNU6-1339P-201ENST00000363574 GPCPD1Q9NPB8 672 aa8.68□□□□□ -1.02
RNU6-1339P-201ENST00000363574 TYW1BQ6NUM6 668 aa8.67□□□□□ -1.02
RNU6-1339P-201ENST00000363574 PCDHGA4Q9Y5G9 962 aa8.67□□□□□ -1.02
RNU6-1339P-201ENST00000363574 KDM4FA0A1W2PPD8 638 aa8.65□□□□□ -1.02
RNU6-1339P-201ENST00000363574 SSTR3P32745 418 aaPredicted RBP8.65□□□□□ -1.02
RNU6-1339P-201ENST00000363574 FBXW7Q969H0 707 aa8.65□□□□□ -1.02
RNU6-1339P-201ENST00000363574 JPH4Q96JJ6 628 aa8.65□□□□□ -1.02
RNU6-1339P-201ENST00000363574 POTEIP0CG38 1075 aa8.63□□□□□ -1.03
RNU6-1339P-201ENST00000363574 FAM161AQ3B820 660 aa8.63□□□□□ -1.03
RNU6-1339P-201ENST00000363574 METTL3Q86U44 580 aaKnown RBP8.63□□□□□ -1.03
RNU6-1339P-201ENST00000363574 ARID3CA6NKF2 412 aa8.62□□□□□ -1.03
RNU6-1339P-201ENST00000363574 FOSBP53539 338 aa8.62□□□□□ -1.03
RNU6-1339P-201ENST00000363574 SKIV2LQ15477 1246 aaKnown RBP8.62□□□□□ -1.03
RNU6-1339P-201ENST00000363574 BEGAINQ9BUH8 593 aa8.62□□□□□ -1.03
RNU6-1339P-201ENST00000363574 FAM217BQ9NTX9 383 aaPredicted RBP8.62□□□□□ -1.03
RNU6-1339P-201ENST00000363574 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.62□□□□□ -1.03
RNU6-1339P-201ENST00000363574 NLRP7Q8WX94 980 aa8.61□□□□□ -1.03
RNU6-1339P-201ENST00000363574 CLUAP1Q96AJ1 413 aa8.61□□□□□ -1.03
RNU6-1339P-201ENST00000363574 ARID3AQ99856 593 aa8.61□□□□□ -1.03
RNU6-1339P-201ENST00000363574 A6NJR5 290 aa8.6□□□□□ -1.03
RNU6-1339P-201ENST00000363574 APBB1O00213 710 aa8.6□□□□□ -1.03
RNU6-1339P-201ENST00000363574 OATP04181 439 aa8.6□□□□□ -1.03
RNU6-1339P-201ENST00000363574 MCM6Q14566 821 aa8.6□□□□□ -1.03
RNU6-1339P-201ENST00000363574 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
RNU6-1339P-201ENST00000363574 PADI6Q6TGC4 694 aa8.6□□□□□ -1.03
RNU6-1339P-201ENST00000363574 CERKQ8TCT0 537 aa8.6□□□□□ -1.03
RNU6-1339P-201ENST00000363574 PXYLP1Q8TE99 480 aa8.6□□□□□ -1.03
RNU6-1339P-201ENST00000363574 ADGRG1Q9Y653 693 aa8.6□□□□□ -1.03
RNU6-1339P-201ENST00000363574 TTC13Q8NBP0 860 aa8.59□□□□□ -1.03
RNU6-1339P-201ENST00000363574 PROCA1Q8NCQ7 364 aaPredicted RBP8.58□□□□□ -1.04
RNU6-1339P-201ENST00000363574 TRAK2O60296 914 aa8.57□□□□□ -1.04
RNU6-1339P-201ENST00000363574 ZDHHC16Q969W1 377 aa8.57□□□□□ -1.04
RNU6-1339P-201ENST00000363574 RBM27Q9P2N5 1060 aaKnown RBP8.57□□□□□ -1.04
RNU6-1339P-201ENST00000363574 ZNF454Q8N9F8 522 aa8.56□□□□□ -1.04
RNU6-1339P-201ENST00000363574 POLR3EQ9NVU0 708 aa8.56□□□□□ -1.04
RNU6-1339P-201ENST00000363574 MYSM1Q5VVJ2 828 aa8.55□□□□□ -1.04
RNU6-1339P-201ENST00000363574 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.55□□□□□ -1.04
RNU6-1339P-201ENST00000363574 ADAM33Q9BZ11 813 aa8.54□□□□□ -1.04
RNU6-1339P-201ENST00000363574 NUDT7P0C024 238 aa8.53□□□□□ -1.04
RNU6-1339P-201ENST00000363574 PRSS12P56730 875 aa8.53□□□□□ -1.04
RNU6-1339P-201ENST00000363574 CLK2P49760 499 aaKnown RBP8.52□□□□□ -1.05
RNU6-1339P-201ENST00000363574 KHSRPQ92945 711 aaKnown RBP eCLIP8.52□□□□□ -1.05
RNU6-1339P-201ENST00000363574 RBM46Q8TBY0 533 aaKnown RBP8.51□□□□□ -1.05
RNU6-1339P-201ENST00000363574 CDCA7LQ96GN5 454 aa8.51□□□□□ -1.05
RNU6-1339P-201ENST00000363574 TBC1D2Q9BYX2 928 aa8.51□□□□□ -1.05
RNU6-1339P-201ENST00000363574 ATP1B4Q9UN42 357 aaPredicted RBP8.51□□□□□ -1.05
RNU6-1339P-201ENST00000363574 HOXB3P14651 431 aaPredicted RBP8.5□□□□□ -1.05
RNU6-1339P-201ENST00000363574 ARSIQ5FYB1 569 aa8.5□□□□□ -1.05
RNU6-1339P-201ENST00000363574 PROSER2Q86WR7 435 aaPredicted RBP8.5□□□□□ -1.05
RNU6-1339P-201ENST00000363574 CCDC82Q8N4S0 544 aa8.5□□□□□ -1.05
RNU6-1339P-201ENST00000363574 POM121Q96HA1 1249 aa8.5□□□□□ -1.05
RNU6-1339P-201ENST00000363574 PODXL2Q9NZ53 605 aa8.5□□□□□ -1.05
RNU6-1339P-201ENST00000363574 FBXO31Q5XUX0 539 aaPredicted RBP8.49□□□□□ -1.05
RNU6-1339P-201ENST00000363574 FNBP4Q8N3X1 1017 aaPredicted RBP8.49□□□□□ -1.05
RNU6-1339P-201ENST00000363574 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
RNU6-1339P-201ENST00000363574 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.48□□□□□ -1.05
RNU6-1339P-201ENST00000363574 SPDYE5A6NIY4 337 aa8.48□□□□□ -1.05
RNU6-1339P-201ENST00000363574 DIXDC1Q155Q3 683 aa8.48□□□□□ -1.05
RNU6-1339P-201ENST00000363574 DOK7Q18PE1 504 aa8.48□□□□□ -1.05
RNU6-1339P-201ENST00000363574 GPR153Q6NV75 609 aa8.48□□□□□ -1.05
RNU6-1339P-201ENST00000363574 RFC5P40937 340 aa8.47□□□□□ -1.05
RNU6-1339P-201ENST00000363574 TRIM26Q12899 539 aaPredicted RBP8.47□□□□□ -1.05
RNU6-1339P-201ENST00000363574 ZSWIM6Q9HCJ5 1215 aa8.47□□□□□ -1.05
RNU6-1339P-201ENST00000363574 LIMD1Q9UGP4 676 aa8.47□□□□□ -1.05
RNU6-1339P-201ENST00000363574 RCCD1A6NED2 376 aa8.46□□□□□ -1.06
RNU6-1339P-201ENST00000363574 RAD21O60216 631 aa8.46□□□□□ -1.06
RNU6-1339P-201ENST00000363574 COL9A1P20849 921 aa8.46□□□□□ -1.06
RNU6-1339P-201ENST00000363574 BANK1Q8NDB2 785 aa8.46□□□□□ -1.06
RNU6-1339P-201ENST00000363574 SPIRE2Q8WWL2 714 aa8.46□□□□□ -1.06
RNU6-1339P-201ENST00000363574 EYA1Q99502 592 aa8.46□□□□□ -1.06
RNU6-1339P-201ENST00000363574 ZNF777Q9ULD5 760 aaPredicted RBP8.46□□□□□ -1.06
RNU6-1339P-201ENST00000363574 CD46P15529 392 aa8.45□□□□□ -1.06
RNU6-1339P-201ENST00000363574 PPP2R2DQ66LE6 453 aa8.45□□□□□ -1.06
RNU6-1339P-201ENST00000363574 SNRKQ9NRH2 765 aa8.45□□□□□ -1.06
RNU6-1339P-201ENST00000363574 COG6Q9Y2V7 657 aa8.45□□□□□ -1.06
RNU6-1339P-201ENST00000363574 RIMBP2O15034 1052 aa8.44□□□□□ -1.06
RNU6-1339P-201ENST00000363574 POTEJP0CG39 1038 aa8.44□□□□□ -1.06
RNU6-1339P-201ENST00000363574 RIC3Q7Z5B4 369 aa8.44□□□□□ -1.06
RNU6-1339P-201ENST00000363574 LHX6Q9UPM6 363 aa8.44□□□□□ -1.06
RNU6-1339P-201ENST00000363574 C3orf80F5H4A9 247 aa8.43□□□□□ -1.06
RNU6-1339P-201ENST00000363574 HRCP23327 699 aa8.43□□□□□ -1.06
RNU6-1339P-201ENST00000363574 TMEM259Q4ZIN3 620 aa8.43□□□□□ -1.06
RNU6-1339P-201ENST00000363574 POTEHQ6S545 545 aa8.43□□□□□ -1.06
RNU6-1339P-201ENST00000363574 BCL2L12Q9HB09 334 aa8.43□□□□□ -1.06
RNU6-1339P-201ENST00000363574 TSKSQ9UJT2 592 aa8.43□□□□□ -1.06
RNU6-1339P-201ENST00000363574 TUSC1Q2TAM9 212 aa8.42□□□□□ -1.06
RNU6-1339P-201ENST00000363574 PPP4R3BQ5MIZ7 849 aa8.42□□□□□ -1.06
RNU6-1339P-201ENST00000363574 PPP1R3GB7ZBB8 358 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms