RNA–Protein interactions for RNA: ENST00000363299.1

RNU5D-1-201, Transcript of RNA, U5D small nuclear 1, humanhuman

BASIC

Gene RNU5D-1, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5D-1-201ENST00000363299 PSDA5PKW4 1024 aaPredicted RBP8.84□□□□□ -0.99
RNU5D-1-201ENST00000363299 IRF6O14896 467 aa8.84□□□□□ -0.99
RNU5D-1-201ENST00000363299 TSR1Q2NL82 804 aaKnown RBP8.84□□□□□ -0.99
RNU5D-1-201ENST00000363299 PDE4DQ08499 809 aa8.83□□□□□ -1
RNU5D-1-201ENST00000363299 CERKQ8TCT0 537 aa8.83□□□□□ -1
RNU5D-1-201ENST00000363299 FECHP22830 423 aa8.82□□□□□ -1
RNU5D-1-201ENST00000363299 PPP4R3BQ5MIZ7 849 aa8.82□□□□□ -1
RNU5D-1-201ENST00000363299 NPDC1Q9NQX5 325 aaPredicted RBP8.82□□□□□ -1
RNU5D-1-201ENST00000363299 AMHR2Q16671 573 aa8.81□□□□□ -1
RNU5D-1-201ENST00000363299 GPBP1L1Q9HC44 474 aaPredicted RBP8.81□□□□□ -1
RNU5D-1-201ENST00000363299 DAXXQ9UER7 740 aaPredicted RBP8.81□□□□□ -1
RNU5D-1-201ENST00000363299 ADAM33Q9BZ11 813 aa8.8□□□□□ -1
RNU5D-1-201ENST00000363299 KDM4CQ9H3R0 1056 aa8.8□□□□□ -1
RNU5D-1-201ENST00000363299 LHX6Q9UPM6 363 aa8.8□□□□□ -1
RNU5D-1-201ENST00000363299 HOXB1P14653 301 aaPredicted RBP8.79□□□□□ -1
RNU5D-1-201ENST00000363299 C6orf132Q5T0Z8 1188 aa8.79□□□□□ -1
RNU5D-1-201ENST00000363299 RBM27Q9P2N5 1060 aaKnown RBP8.79□□□□□ -1
RNU5D-1-201ENST00000363299 OTUD5Q96G74 571 aa8.78□□□□□ -1
RNU5D-1-201ENST00000363299 TTLL12Q14166 644 aaPredicted RBP8.77□□□□□ -1.01
RNU5D-1-201ENST00000363299 PARP9Q8IXQ6 854 aa8.76□□□□□ -1.01
RNU5D-1-201ENST00000363299 BCL2L12Q9HB09 334 aa8.76□□□□□ -1.01
RNU5D-1-201ENST00000363299 LHX8Q68G74 356 aa8.75□□□□□ -1.01
RNU5D-1-201ENST00000363299 PADI6Q6TGC4 694 aa8.75□□□□□ -1.01
RNU5D-1-201ENST00000363299 PPP1R3GB7ZBB8 358 aa8.73□□□□□ -1.01
RNU5D-1-201ENST00000363299 PTPREP23469 700 aa8.73□□□□□ -1.01
RNU5D-1-201ENST00000363299 OATP04181 439 aa8.72□□□□□ -1.01
RNU5D-1-201ENST00000363299 PRSS12P56730 875 aa8.72□□□□□ -1.01
RNU5D-1-201ENST00000363299 KCNH8Q96L42 1107 aa8.72□□□□□ -1.01
RNU5D-1-201ENST00000363299 GTF3C3Q9Y5Q9 886 aa8.72□□□□□ -1.01
RNU5D-1-201ENST00000363299 CLCN1P35523 988 aa8.71□□□□□ -1.02
RNU5D-1-201ENST00000363299 GIGYF2Q6Y7W6 1299 aaKnown RBP8.71□□□□□ -1.02
RNU5D-1-201ENST00000363299 METTL3Q86U44 580 aaKnown RBP8.71□□□□□ -1.02
RNU5D-1-201ENST00000363299 TTC13Q8NBP0 860 aa8.71□□□□□ -1.02
RNU5D-1-201ENST00000363299 CDCA7LQ96GN5 454 aa8.71□□□□□ -1.02
RNU5D-1-201ENST00000363299 DDRGK1Q96HY6 314 aa8.71□□□□□ -1.02
RNU5D-1-201ENST00000363299 ADGRG1Q9Y653 693 aa8.71□□□□□ -1.02
RNU5D-1-201ENST00000363299 COL9A1P20849 921 aa8.69□□□□□ -1.02
RNU5D-1-201ENST00000363299 GPCPD1Q9NPB8 672 aa8.69□□□□□ -1.02
RNU5D-1-201ENST00000363299 MDM2Q00987 491 aaPredicted RBP8.68□□□□□ -1.02
RNU5D-1-201ENST00000363299 FAM161AQ3B820 660 aa8.68□□□□□ -1.02
RNU5D-1-201ENST00000363299 IL27Q8NEV9 243 aa8.68□□□□□ -1.02
RNU5D-1-201ENST00000363299 RBM46Q8TBY0 533 aaKnown RBP8.68□□□□□ -1.02
RNU5D-1-201ENST00000363299 PXYLP1Q8TE99 480 aa8.68□□□□□ -1.02
RNU5D-1-201ENST00000363299 KCNK17Q96T54 332 aa8.68□□□□□ -1.02
RNU5D-1-201ENST00000363299 NBPF26B4DH59 902 aa8.67□□□□□ -1.02
RNU5D-1-201ENST00000363299 PHOX2BQ99453 314 aa8.67□□□□□ -1.02
RNU5D-1-201ENST00000363299 FAM117AQ9C073 453 aa8.67□□□□□ -1.02
RNU5D-1-201ENST00000363299 ERBB3P21860 1342 aa8.66□□□□□ -1.02
RNU5D-1-201ENST00000363299 TMUB1Q9BVT8 246 aa8.65□□□□□ -1.02
RNU5D-1-201ENST00000363299 TRIM6-TRIM34B2RNG4 842 aa8.64□□□□□ -1.03
RNU5D-1-201ENST00000363299 EMP3P54852 163 aa8.64□□□□□ -1.03
RNU5D-1-201ENST00000363299 VARS2Q5ST30 1063 aaKnown RBP8.64□□□□□ -1.03
RNU5D-1-201ENST00000363299 ERICH6Q7L0X2 663 aa8.64□□□□□ -1.03
RNU5D-1-201ENST00000363299 TSKSQ9UJT2 592 aa8.64□□□□□ -1.03
RNU5D-1-201ENST00000363299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.63□□□□□ -1.03
RNU5D-1-201ENST00000363299 PLEKHG3A1L390 1219 aa8.63□□□□□ -1.03
RNU5D-1-201ENST00000363299 MS4A1P11836 297 aa8.63□□□□□ -1.03
RNU5D-1-201ENST00000363299 REPIN1Q9BWE0 567 aaKnown RBP8.63□□□□□ -1.03
RNU5D-1-201ENST00000363299 FAM198AQ9UFP1 575 aa8.63□□□□□ -1.03
RNU5D-1-201ENST00000363299 ST18O60284 1047 aa8.62□□□□□ -1.03
RNU5D-1-201ENST00000363299 PACS2Q86VP3 889 aa8.62□□□□□ -1.03
RNU5D-1-201ENST00000363299 PBX2P40425 430 aa8.61□□□□□ -1.03
RNU5D-1-201ENST00000363299 NLRP7Q8WX94 980 aa8.61□□□□□ -1.03
RNU5D-1-201ENST00000363299 FAM217BQ9NTX9 383 aaPredicted RBP8.61□□□□□ -1.03
RNU5D-1-201ENST00000363299 ONECUT3O60422 494 aaPredicted RBP8.6□□□□□ -1.03
RNU5D-1-201ENST00000363299 PROX2Q3B8N5 592 aa8.6□□□□□ -1.03
RNU5D-1-201ENST00000363299 EYA1Q99502 592 aa8.6□□□□□ -1.03
RNU5D-1-201ENST00000363299 RCCD1A6NED2 376 aa8.59□□□□□ -1.03
RNU5D-1-201ENST00000363299 ARHGAP33O14559 1287 aa8.59□□□□□ -1.03
RNU5D-1-201ENST00000363299 DNAJB2P25686 324 aa8.59□□□□□ -1.03
RNU5D-1-201ENST00000363299 SSTR3P32745 418 aaPredicted RBP8.59□□□□□ -1.03
RNU5D-1-201ENST00000363299 NUDT18Q6ZVK8 323 aa8.59□□□□□ -1.03
RNU5D-1-201ENST00000363299 ZBED2Q9BTP6 218 aa8.59□□□□□ -1.03
RNU5D-1-201ENST00000363299 PNMA3Q9UL41 463 aa8.59□□□□□ -1.03
RNU5D-1-201ENST00000363299 PSEN2P49810 448 aa8.58□□□□□ -1.04
RNU5D-1-201ENST00000363299 TATDN2Q93075 761 aa8.58□□□□□ -1.04
RNU5D-1-201ENST00000363299 MARVELD3Q96A59 401 aa8.58□□□□□ -1.04
RNU5D-1-201ENST00000363299 GOPCQ9HD26 462 aa8.58□□□□□ -1.04
RNU5D-1-201ENST00000363299 TIMELESSQ9UNS1 1208 aa8.58□□□□□ -1.04
RNU5D-1-201ENST00000363299 BEGAINQ9BUH8 593 aa8.57□□□□□ -1.04
RNU5D-1-201ENST00000363299 SULF1Q8IWU6 871 aa8.56□□□□□ -1.04
RNU5D-1-201ENST00000363299 SLC4A5Q9BY07 1137 aa8.56□□□□□ -1.04
RNU5D-1-201ENST00000363299 TMEM134Q9H6X4 195 aa8.56□□□□□ -1.04
RNU5D-1-201ENST00000363299 FAM205CA6NFA0 338 aa8.55□□□□□ -1.04
RNU5D-1-201ENST00000363299 SH3D19Q5HYK7 790 aa8.55□□□□□ -1.04
RNU5D-1-201ENST00000363299 RSPH6AQ9H0K4 717 aa8.55□□□□□ -1.04
RNU5D-1-201ENST00000363299 RABGEF1Q9UJ41 708 aa8.55□□□□□ -1.04
RNU5D-1-201ENST00000363299 C3orf80F5H4A9 247 aa8.54□□□□□ -1.04
RNU5D-1-201ENST00000363299 C14orf37Q86TY3 774 aa8.54□□□□□ -1.04
RNU5D-1-201ENST00000363299 ZNF687Q8N1G0 1237 aa8.54□□□□□ -1.04
RNU5D-1-201ENST00000363299 KIAA1468Q9P260 1216 aa8.54□□□□□ -1.04
RNU5D-1-201ENST00000363299 SMAPO00193 183 aa8.53□□□□□ -1.04
RNU5D-1-201ENST00000363299 POTEEQ6S8J3 1075 aa8.53□□□□□ -1.04
RNU5D-1-201ENST00000363299 FAM163AQ96GL9 167 aaPredicted RBP8.53□□□□□ -1.04
RNU5D-1-201ENST00000363299 PCMTD1Q96MG8 357 aaPredicted RBP8.53□□□□□ -1.04
RNU5D-1-201ENST00000363299 AXIN2Q9Y2T1 843 aa8.53□□□□□ -1.04
RNU5D-1-201ENST00000363299 DMRTA1Q5VZB9 504 aa8.52□□□□□ -1.05
RNU5D-1-201ENST00000363299 HS3ST6Q96QI5 342 aa8.52□□□□□ -1.05
RNU5D-1-201ENST00000363299 DIXDC1Q155Q3 683 aa8.51□□□□□ -1.05
RNU5D-1-201ENST00000363299 NBPF3Q9H094 633 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms