RNA–Protein interactions for RNA: ENST00000361391.10

CTNND1-203, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-203ENST00000361391 RASSF8Q8NHQ8 419 aa10.08□□□□□ -0.8
CTNND1-203ENST00000361391 SPAG9O60271 1321 aaKnown RBP10.07□□□□□ -0.8
CTNND1-203ENST00000361391 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-203ENST00000361391 CENPJQ9HC77 1338 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-203ENST00000361391 CCDC88BA6NC98 1476 aa10.07□□□□□ -0.8
CTNND1-203ENST00000361391 L3MBTL2Q969R5 705 aa10.06□□□□□ -0.8
CTNND1-203ENST00000361391 SYAP1Q96A49 352 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-203ENST00000361391 CFAP44Q96MT7 982 aa10.06□□□□□ -0.8
CTNND1-203ENST00000361391 VPS8Q8N3P4 1428 aa10.06□□□□□ -0.8
CTNND1-203ENST00000361391 CALD1Q05682 793 aaKnown RBP10.05□□□□□ -0.8
CTNND1-203ENST00000361391 GPATCH3Q96I76 525 aa10.05□□□□□ -0.8
CTNND1-203ENST00000361391 KIF3BO15066 747 aa10.05□□□□□ -0.8
CTNND1-203ENST00000361391 RILPL2Q969X0 211 aa10.05□□□□□ -0.8
CTNND1-203ENST00000361391 TRAK1Q9UPV9 953 aa10.05□□□□□ -0.8
CTNND1-203ENST00000361391 A0A0U1RQG5 324 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-203ENST00000361391 TPM4P67936 248 aa10.04□□□□□ -0.8
CTNND1-203ENST00000361391 VPS53Q5VIR6 699 aa10.04□□□□□ -0.8
CTNND1-203ENST00000361391 WIZO95785 1651 aa10.04□□□□□ -0.8
CTNND1-203ENST00000361391 PTMSP20962 102 aa10.04□□□□□ -0.8
CTNND1-203ENST00000361391 CWC22Q9HCG8 908 aaKnown RBP10.04□□□□□ -0.8
CTNND1-203ENST00000361391 HTATSF1O43719 755 aaKnown RBP10.03□□□□□ -0.8
CTNND1-203ENST00000361391 NGDNQ8NEJ9 315 aaKnown RBP10.03□□□□□ -0.8
CTNND1-203ENST00000361391 AMPHP49418 695 aa10.03□□□□□ -0.8
CTNND1-203ENST00000361391 FBXO3Q9UK99 471 aa10.03□□□□□ -0.8
CTNND1-203ENST00000361391 PES1O00541 588 aaKnown RBP10.03□□□□□ -0.8
CTNND1-203ENST00000361391 NGEFQ8N5V2 710 aa10.03□□□□□ -0.8
CTNND1-203ENST00000361391 EIF3AQ14152 1382 aaKnown RBP10.02□□□□□ -0.81
CTNND1-203ENST00000361391 NECTIN2Q92692 538 aa10.02□□□□□ -0.81
CTNND1-203ENST00000361391 TIMELESSQ9UNS1 1208 aa10.02□□□□□ -0.81
CTNND1-203ENST00000361391 EXOC6Q8TAG9 804 aa10.02□□□□□ -0.81
CTNND1-203ENST00000361391 ANKRD45Q5TZF3 282 aa10.02□□□□□ -0.81
CTNND1-203ENST00000361391 PPP1R1BQ9UD71 204 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-203ENST00000361391 FRAT2O75474 233 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-203ENST00000361391 HMMRO75330 724 aa10.01□□□□□ -0.81
CTNND1-203ENST00000361391 TNNT3P45378 269 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-203ENST00000361391 TDRD9Q8NDG6 1382 aaKnown RBP10.01□□□□□ -0.81
CTNND1-203ENST00000361391 CRBNQ96SW2 442 aa10.01□□□□□ -0.81
CTNND1-203ENST00000361391 KIF16BQ96L93 1317 aa10.01□□□□□ -0.81
CTNND1-203ENST00000361391 PANK3Q9H999 370 aa10.01□□□□□ -0.81
CTNND1-203ENST00000361391 ANKRD30AQ9BXX3 1397 aa10.01□□□□□ -0.81
CTNND1-203ENST00000361391 WWC1Q8IX03 1113 aa10□□□□□ -0.81
CTNND1-203ENST00000361391 FHOD3Q2V2M9 1422 aa10□□□□□ -0.81
CTNND1-203ENST00000361391 TERF2IPQ9NYB0 399 aa10□□□□□ -0.81
CTNND1-203ENST00000361391 BCL11BQ9C0K0 894 aaPredicted RBP10□□□□□ -0.81
CTNND1-203ENST00000361391 SF3A1Q15459 793 aaKnown RBP9.99□□□□□ -0.81
CTNND1-203ENST00000361391 H3BQV1 296 aa9.99□□□□□ -0.81
CTNND1-203ENST00000361391 IFFO2Q5TF58 517 aa9.99□□□□□ -0.81
CTNND1-203ENST00000361391 ST18O60284 1047 aa9.99□□□□□ -0.81
CTNND1-203ENST00000361391 CCAR2Q8N163 923 aaKnown RBP9.99□□□□□ -0.81
CTNND1-203ENST00000361391 COG6Q9Y2V7 657 aa9.98□□□□□ -0.81
CTNND1-203ENST00000361391 ST20-MTHFSA0A0A6YYL1 179 aa9.98□□□□□ -0.81
CTNND1-203ENST00000361391 MARCH6O60337 910 aa9.98□□□□□ -0.81
CTNND1-203ENST00000361391 WASHC2CQ9Y4E1 1318 aa9.98□□□□□ -0.81
CTNND1-203ENST00000361391 NLRP13Q86W25 1043 aa9.98□□□□□ -0.81
CTNND1-203ENST00000361391 GOLGA6L1Q8N7Z2 621 aa9.98□□□□□ -0.81
CTNND1-203ENST00000361391 FBXW7Q969H0 707 aa9.98□□□□□ -0.81
CTNND1-203ENST00000361391 RAD21O60216 631 aa9.98□□□□□ -0.81
CTNND1-203ENST00000361391 FOSBP53539 338 aa9.98□□□□□ -0.81
CTNND1-203ENST00000361391 FMN1Q68DA7 1419 aa9.97□□□□□ -0.81
CTNND1-203ENST00000361391 PDE4AP27815 886 aa9.97□□□□□ -0.81
CTNND1-203ENST00000361391 CSPP1Q1MSJ5 1256 aa9.97□□□□□ -0.81
CTNND1-203ENST00000361391 MCTP1Q6DN14 999 aa9.97□□□□□ -0.81
CTNND1-203ENST00000361391 EIF2S2P20042 333 aaKnown RBP9.97□□□□□ -0.81
CTNND1-203ENST00000361391 GTF2E1P29083 439 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-203ENST00000361391 ZNF592Q92610 1267 aa9.96□□□□□ -0.81
CTNND1-203ENST00000361391 DDX49Q9Y6V7 483 aaKnown RBP9.96□□□□□ -0.81
CTNND1-203ENST00000361391 CARMIL2Q6F5E8 1435 aa9.96□□□□□ -0.81
CTNND1-203ENST00000361391 TPD52L1Q16890 204 aaPredicted RBP9.96□□□□□ -0.81
CTNND1-203ENST00000361391 EFCAB2Q5VUJ9 269 aa9.96□□□□□ -0.81
CTNND1-203ENST00000361391 MYBBP1AQ9BQG0 1328 aaKnown RBP9.96□□□□□ -0.82
CTNND1-203ENST00000361391 KIF15Q9NS87 1388 aa9.96□□□□□ -0.82
CTNND1-203ENST00000361391 FAM184AQ8NB25 1140 aa9.95□□□□□ -0.82
CTNND1-203ENST00000361391 RRP1P56182 461 aaKnown RBP9.95□□□□□ -0.82
CTNND1-203ENST00000361391 TOP2AP11388 1531 aaKnown RBP9.95□□□□□ -0.82
CTNND1-203ENST00000361391 PATL2C9JE40 543 aaKnown RBP9.95□□□□□ -0.82
CTNND1-203ENST00000361391 PHF14O94880 888 aa9.94□□□□□ -0.82
CTNND1-203ENST00000361391 TPM3P06753 285 aa9.94□□□□□ -0.82
CTNND1-203ENST00000361391 FAM161AQ3B820 660 aa9.94□□□□□ -0.82
CTNND1-203ENST00000361391 SMARCA2P51531 1590 aa9.94□□□□□ -0.82
CTNND1-203ENST00000361391 DDX11L8A8MPP1 907 aa9.94□□□□□ -0.82
CTNND1-203ENST00000361391 EID1Q9Y6B2 187 aa9.94□□□□□ -0.82
CTNND1-203ENST00000361391 MINK1Q8N4C8 1332 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-203ENST00000361391 CENPQQ7L2Z9 268 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-203ENST00000361391 LMOD3Q0VAK6 560 aa9.93□□□□□ -0.82
CTNND1-203ENST00000361391 ANO2Q9NQ90 1003 aa9.93□□□□□ -0.82
CTNND1-203ENST00000361391 HSP90AA2PQ14568 343 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-203ENST00000361391 KDM4AO75164 1064 aa9.92□□□□□ -0.82
CTNND1-203ENST00000361391 APAF1O14727 1248 aa9.92□□□□□ -0.82
CTNND1-203ENST00000361391 CCDC34Q96HJ3 373 aa9.92□□□□□ -0.82
CTNND1-203ENST00000361391 GOLGA6L19H0YKK7 550 aa9.92□□□□□ -0.82
CTNND1-203ENST00000361391 GSE1Q14687 1217 aa9.92□□□□□ -0.82
CTNND1-203ENST00000361391 C1orf141Q5JVX7 400 aa9.92□□□□□ -0.82
CTNND1-203ENST00000361391 ZKSCAN2Q63HK3 967 aa9.91□□□□□ -0.82
CTNND1-203ENST00000361391 SF3B2Q13435 895 aaKnown RBP9.91□□□□□ -0.82
CTNND1-203ENST00000361391 CEP89Q96ST8 783 aa9.91□□□□□ -0.82
CTNND1-203ENST00000361391 DIAPH3Q9NSV4 1193 aa9.91□□□□□ -0.82
CTNND1-203ENST00000361391 PDE3BQ13370 1112 aa9.91□□□□□ -0.82
CTNND1-203ENST00000361391 COG3Q96JB2 828 aa9.91□□□□□ -0.82
CTNND1-203ENST00000361391 BECN2A8MW95 431 aa9.9□□□□□ -0.82
CTNND1-203ENST00000361391 PCMTD1Q96MG8 357 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms