RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 SPAG9O60271 1321 aaKnown RBP10.31□□□□□ -0.76
NCKAP1-202ENST00000361354 SENP3Q9H4L4 574 aaPredicted RBP10.31□□□□□ -0.76
NCKAP1-202ENST00000361354 TIMELESSQ9UNS1 1208 aa10.31□□□□□ -0.76
NCKAP1-202ENST00000361354 TSPYL1Q9H0U9 437 aa10.31□□□□□ -0.76
NCKAP1-202ENST00000361354 AKAP17AQ02040 695 aaKnown RBP10.31□□□□□ -0.76
NCKAP1-202ENST00000361354 DDX49Q9Y6V7 483 aaKnown RBP10.31□□□□□ -0.76
NCKAP1-202ENST00000361354 GSE1Q14687 1217 aa10.3□□□□□ -0.76
NCKAP1-202ENST00000361354 CLIP1P30622 1438 aa10.3□□□□□ -0.76
NCKAP1-202ENST00000361354 CCDC47Q96A33 483 aaKnown RBP10.3□□□□□ -0.76
NCKAP1-202ENST00000361354 USP8P40818 1118 aa10.3□□□□□ -0.76
NCKAP1-202ENST00000361354 KIAA0754O94854 1291 aa10.3□□□□□ -0.76
NCKAP1-202ENST00000361354 KTN1Q86UP2 1357 aaKnown RBP10.3□□□□□ -0.76
NCKAP1-202ENST00000361354 FAM184AQ8NB25 1140 aa10.3□□□□□ -0.76
NCKAP1-202ENST00000361354 RRP7BPQ9NSQ0 103 aa10.3□□□□□ -0.76
NCKAP1-202ENST00000361354 RGL3Q3MIN7 710 aa10.29□□□□□ -0.76
NCKAP1-202ENST00000361354 FAM43AQ8N2R8 423 aa10.29□□□□□ -0.76
NCKAP1-202ENST00000361354 DIAPH3Q9NSV4 1193 aa10.29□□□□□ -0.76
NCKAP1-202ENST00000361354 NAP1L1P55209 391 aaKnown RBP10.29□□□□□ -0.76
NCKAP1-202ENST00000361354 TMF1P82094 1093 aa10.28□□□□□ -0.76
NCKAP1-202ENST00000361354 NOL8Q76FK4 1167 aaKnown RBP10.28□□□□□ -0.76
NCKAP1-202ENST00000361354 IFT57Q9NWB7 429 aa10.28□□□□□ -0.76
NCKAP1-202ENST00000361354 TAF3Q5VWG9 929 aa10.28□□□□□ -0.76
NCKAP1-202ENST00000361354 CHMP3Q9Y3E7 222 aa10.28□□□□□ -0.76
NCKAP1-202ENST00000361354 WWC1Q8IX03 1113 aa10.27□□□□□ -0.77
NCKAP1-202ENST00000361354 STK31Q9BXU1 1019 aa10.27□□□□□ -0.77
NCKAP1-202ENST00000361354 GOLGA6L10A6NI86 522 aa10.27□□□□□ -0.77
NCKAP1-202ENST00000361354 RCAN3Q9UKA8 241 aa10.27□□□□□ -0.77
NCKAP1-202ENST00000361354 TOMM22Q9NS69 142 aa10.27□□□□□ -0.77
NCKAP1-202ENST00000361354 DEF6Q9H4E7 631 aa10.26□□□□□ -0.77
NCKAP1-202ENST00000361354 ANKRD18AQ8IVF6 992 aa10.26□□□□□ -0.77
NCKAP1-202ENST00000361354 HSP90AB2PQ58FF8 381 aa10.26□□□□□ -0.77
NCKAP1-202ENST00000361354 EPS15P42566 896 aa10.26□□□□□ -0.77
NCKAP1-202ENST00000361354 CCER2I3L3R5 266 aa10.26□□□□□ -0.77
NCKAP1-202ENST00000361354 CCP110O43303 1012 aa10.25□□□□□ -0.77
NCKAP1-202ENST00000361354 FOXD4L1Q9NU39 408 aa10.25□□□□□ -0.77
NCKAP1-202ENST00000361354 ZCCHC6Q5VYS8 1495 aaKnown RBP10.25□□□□□ -0.77
NCKAP1-202ENST00000361354 EZRP15311 586 aaKnown RBP10.25□□□□□ -0.77
NCKAP1-202ENST00000361354 FOXD4L5Q5VV16 416 aaPredicted RBP10.25□□□□□ -0.77
NCKAP1-202ENST00000361354 FOXD4L4Q8WXT5 416 aaPredicted RBP10.25□□□□□ -0.77
NCKAP1-202ENST00000361354 MCTP1Q6DN14 999 aa10.24□□□□□ -0.77
NCKAP1-202ENST00000361354 LRRFIP1Q32MZ4 808 aaKnown RBP10.24□□□□□ -0.77
NCKAP1-202ENST00000361354 MORC1Q86VD1 984 aa10.24□□□□□ -0.77
NCKAP1-202ENST00000361354 CLASRPQ8N2M8 674 aaKnown RBP10.24□□□□□ -0.77
NCKAP1-202ENST00000361354 AXDND1Q5T1B0 1012 aaPredicted RBP10.24□□□□□ -0.77
NCKAP1-202ENST00000361354 CGNL1Q0VF96 1302 aa10.23□□□□□ -0.77
NCKAP1-202ENST00000361354 ERLIN2O94905 339 aa10.23□□□□□ -0.77
NCKAP1-202ENST00000361354 TRIM29Q14134 588 aa10.23□□□□□ -0.77
NCKAP1-202ENST00000361354 ENOX2Q16206 610 aaKnown RBP10.23□□□□□ -0.77
NCKAP1-202ENST00000361354 CPLX2Q6PUV4 134 aaKnown RBP10.23□□□□□ -0.77
NCKAP1-202ENST00000361354 CCDC43Q96MW1 224 aaKnown RBP10.23□□□□□ -0.77
NCKAP1-202ENST00000361354 CCDC39Q9UFE4 941 aa10.23□□□□□ -0.77
NCKAP1-202ENST00000361354 G3V3G9 751 aa10.23□□□□□ -0.77
NCKAP1-202ENST00000361354 DCAF8Q5TAQ9 597 aa10.23□□□□□ -0.77
NCKAP1-202ENST00000361354 SYNE3Q6ZMZ3 975 aa10.23□□□□□ -0.77
NCKAP1-202ENST00000361354 HMGN5P82970 282 aaKnown RBP10.22□□□□□ -0.77
NCKAP1-202ENST00000361354 KANK1Q14678 1352 aa10.22□□□□□ -0.77
NCKAP1-202ENST00000361354 NAT10Q9H0A0 1025 aaKnown RBP10.22□□□□□ -0.77
NCKAP1-202ENST00000361354 EIF3AQ14152 1382 aaKnown RBP10.22□□□□□ -0.77
NCKAP1-202ENST00000361354 PHLDB1Q86UU1 1377 aa10.22□□□□□ -0.77
NCKAP1-202ENST00000361354 CT47B1P0C2W7 299 aaPredicted RBP10.22□□□□□ -0.77
NCKAP1-202ENST00000361354 SEPT7Q16181 437 aaKnown RBP10.21□□□□□ -0.77
NCKAP1-202ENST00000361354 EEA1Q15075 1411 aa10.21□□□□□ -0.78
NCKAP1-202ENST00000361354 AMOTL1Q8IY63 956 aa10.21□□□□□ -0.78
NCKAP1-202ENST00000361354 BICD2Q8TD16 824 aa10.21□□□□□ -0.78
NCKAP1-202ENST00000361354 GOLGA3Q08378 1498 aa10.2□□□□□ -0.78
NCKAP1-202ENST00000361354 SASS6Q6UVJ0 657 aa10.2□□□□□ -0.78
NCKAP1-202ENST00000361354 GIMAP7Q8NHV1 300 aa10.2□□□□□ -0.78
NCKAP1-202ENST00000361354 SMC4Q9NTJ3 1288 aa10.2□□□□□ -0.78
NCKAP1-202ENST00000361354 ZNF330Q9Y3S2 320 aaPredicted RBP10.2□□□□□ -0.78
NCKAP1-202ENST00000361354 FRAT2O75474 233 aaPredicted RBP10.2□□□□□ -0.78
NCKAP1-202ENST00000361354 OFD1O75665 1012 aa10.2□□□□□ -0.78
NCKAP1-202ENST00000361354 EIF3JO75822 258 aaKnown RBP10.19□□□□□ -0.78
NCKAP1-202ENST00000361354 SRPK2P78362 688 aaKnown RBP10.19□□□□□ -0.78
NCKAP1-202ENST00000361354 PABPN1Q86U42 306 aaKnown RBP eCLIP10.19□□□□□ -0.78
NCKAP1-202ENST00000361354 RABEP1Q15276 862 aa10.18□□□□□ -0.78
NCKAP1-202ENST00000361354 ZFYVE27Q5T4F4 411 aa10.18□□□□□ -0.78
NCKAP1-202ENST00000361354 R3HCC1Q9Y3T6 440 aaKnown RBP10.18□□□□□ -0.78
NCKAP1-202ENST00000361354 CCAR1Q8IX12 1150 aaKnown RBP10.18□□□□□ -0.78
NCKAP1-202ENST00000361354 SEPT11Q9NVA2 429 aaKnown RBP10.17□□□□□ -0.78
NCKAP1-202ENST00000361354 CTDP1Q9Y5B0 961 aaPredicted RBP10.17□□□□□ -0.78
NCKAP1-202ENST00000361354 CPLX1O14810 134 aa10.17□□□□□ -0.78
NCKAP1-202ENST00000361354 HDGFL2Q7Z4V5 671 aaPredicted RBP10.17□□□□□ -0.78
NCKAP1-202ENST00000361354 REC8O95072 547 aa10.17□□□□□ -0.78
NCKAP1-202ENST00000361354 CCDC73Q6ZRK6 1079 aa10.17□□□□□ -0.78
NCKAP1-202ENST00000361354 NASPP49321 788 aaPredicted RBP10.17□□□□□ -0.78
NCKAP1-202ENST00000361354 FOXD4L6Q3SYB3 417 aaPredicted RBP10.17□□□□□ -0.78
NCKAP1-202ENST00000361354 FOXD4L3Q6VB84 417 aaPredicted RBP10.17□□□□□ -0.78
NCKAP1-202ENST00000361354 TRIM34Q9BYJ4 488 aa10.17□□□□□ -0.78
NCKAP1-202ENST00000361354 RUFY2Q8WXA3 655 aa10.17□□□□□ -0.78
NCKAP1-202ENST00000361354 FAM161AQ3B820 660 aa10.17□□□□□ -0.78
NCKAP1-202ENST00000361354 LMOD3Q0VAK6 560 aa10.17□□□□□ -0.78
NCKAP1-202ENST00000361354 SCRIBQ14160 1630 aa10.16□□□□□ -0.78
NCKAP1-202ENST00000361354 OLFM4Q6UX06 510 aa10.16□□□□□ -0.78
NCKAP1-202ENST00000361354 CENPJQ9HC77 1338 aaPredicted RBP10.16□□□□□ -0.78
NCKAP1-202ENST00000361354 RALBP1Q15311 655 aa10.16□□□□□ -0.78
NCKAP1-202ENST00000361354 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.16□□□□□ -0.78
NCKAP1-202ENST00000361354 ZKSCAN1P17029 563 aaPredicted RBP10.16□□□□□ -0.78
NCKAP1-202ENST00000361354 NOL10Q9BSC4 688 aaKnown RBP10.16□□□□□ -0.78
NCKAP1-202ENST00000361354 DHX8Q14562 1220 aaKnown RBP10.16□□□□□ -0.78
NCKAP1-202ENST00000361354 SMARCE1Q969G3 411 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms