RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 RECKO95980 971 aa3.3□□□□□ -1.88
SMARCAD1-202ENST00000359052 CCDC102AQ96A19 550 aa3.3□□□□□ -1.88
SMARCAD1-202ENST00000359052 GPATCH3Q96I76 525 aa3.3□□□□□ -1.88
SMARCAD1-202ENST00000359052 TOP2BQ02880 1626 aa3.3□□□□□ -1.88
SMARCAD1-202ENST00000359052 CC2D2AQ9P2K1 1620 aa3.3□□□□□ -1.88
SMARCAD1-202ENST00000359052 POU3F3P20264 500 aaPredicted RBP3.3□□□□□ -1.88
SMARCAD1-202ENST00000359052 GSE1Q14687 1217 aa3.3□□□□□ -1.88
SMARCAD1-202ENST00000359052 IL27Q8NEV9 243 aa3.3□□□□□ -1.88
SMARCAD1-202ENST00000359052 POTEEQ6S8J3 1075 aa3.29□□□□□ -1.88
SMARCAD1-202ENST00000359052 RPUSD2Q8IZ73 545 aaKnown RBP3.29□□□□□ -1.88
SMARCAD1-202ENST00000359052 TRIM34Q9BYJ4 488 aa3.29□□□□□ -1.88
SMARCAD1-202ENST00000359052 POTECB2RU33 542 aa3.29□□□□□ -1.88
SMARCAD1-202ENST00000359052 SKIV2LQ15477 1246 aaKnown RBP3.29□□□□□ -1.88
SMARCAD1-202ENST00000359052 USTQ9Y2C2 406 aa3.29□□□□□ -1.88
SMARCAD1-202ENST00000359052 LARGE2Q8N3Y3 721 aa3.28□□□□□ -1.88
SMARCAD1-202ENST00000359052 PPP1R3GB7ZBB8 358 aa3.28□□□□□ -1.88
SMARCAD1-202ENST00000359052 POTEAQ6S8J7 498 aa3.28□□□□□ -1.88
SMARCAD1-202ENST00000359052 OCSTAMPQ9BR26 566 aa3.28□□□□□ -1.88
SMARCAD1-202ENST00000359052 MKRN1Q9UHC7 482 aaKnown RBP3.28□□□□□ -1.88
SMARCAD1-202ENST00000359052 ZNF579Q8NAF0 562 aaKnown RBP3.28□□□□□ -1.88
SMARCAD1-202ENST00000359052 SP7Q8TDD2 431 aaPredicted RBP3.28□□□□□ -1.88
SMARCAD1-202ENST00000359052 LRRIQ1Q96JM4 1722 aa3.28□□□□□ -1.88
SMARCAD1-202ENST00000359052 SPATA32Q96LK8 384 aa3.28□□□□□ -1.88
SMARCAD1-202ENST00000359052 SPDYE5A6NIY4 337 aa3.28□□□□□ -1.89
SMARCAD1-202ENST00000359052 TMED8Q6PL24 325 aaPredicted RBP3.28□□□□□ -1.89
SMARCAD1-202ENST00000359052 ABCA5Q8WWZ7 1642 aa3.27□□□□□ -1.89
SMARCAD1-202ENST00000359052 WDR62O43379 1518 aa3.27□□□□□ -1.89
SMARCAD1-202ENST00000359052 NPR3P17342 541 aa3.27□□□□□ -1.89
SMARCAD1-202ENST00000359052 NLGN1Q8N2Q7 840 aa3.27□□□□□ -1.89
SMARCAD1-202ENST00000359052 POM121CA8CG34 1229 aa3.27□□□□□ -1.89
SMARCAD1-202ENST00000359052 GJA5P36382 358 aa3.27□□□□□ -1.89
SMARCAD1-202ENST00000359052 EVX2Q03828 476 aa3.27□□□□□ -1.89
SMARCAD1-202ENST00000359052 EGFLAMQ63HQ2 1017 aa3.27□□□□□ -1.89
SMARCAD1-202ENST00000359052 TINF2Q9BSI4 451 aa3.27□□□□□ -1.89
SMARCAD1-202ENST00000359052 GPHNQ9NQX3 736 aaPredicted RBP3.27□□□□□ -1.89
SMARCAD1-202ENST00000359052 PPP1R15AO75807 674 aaPredicted RBP3.26□□□□□ -1.89
SMARCAD1-202ENST00000359052 POTEIP0CG38 1075 aa3.26□□□□□ -1.89
SMARCAD1-202ENST00000359052 OSCARQ8IYS5 282 aa3.26□□□□□ -1.89
SMARCAD1-202ENST00000359052 PSME1Q06323 249 aa3.26□□□□□ -1.89
SMARCAD1-202ENST00000359052 SNRKQ9NRH2 765 aa3.26□□□□□ -1.89
SMARCAD1-202ENST00000359052 SERPINA10Q9UK55 444 aa3.26□□□□□ -1.89
SMARCAD1-202ENST00000359052 NCAPD3P42695 1498 aa3.26□□□□□ -1.89
SMARCAD1-202ENST00000359052 POTEFA5A3E0 1075 aa3.26□□□□□ -1.89
SMARCAD1-202ENST00000359052 TMEM92Q6UXU6 159 aa3.26□□□□□ -1.89
SMARCAD1-202ENST00000359052 ATG7O95352 703 aa3.25□□□□□ -1.89
SMARCAD1-202ENST00000359052 AKT1S1Q96B36 256 aa3.25□□□□□ -1.89
SMARCAD1-202ENST00000359052 SUGT1Q9Y2Z0 365 aa3.25□□□□□ -1.89
SMARCAD1-202ENST00000359052 PDCD7Q8N8D1 485 aaKnown RBP3.25□□□□□ -1.89
SMARCAD1-202ENST00000359052 TBX22Q9Y458 520 aa3.25□□□□□ -1.89
SMARCAD1-202ENST00000359052 FOXK1P85037 733 aa3.25□□□□□ -1.89
SMARCAD1-202ENST00000359052 RBL2Q08999 1139 aa3.25□□□□□ -1.89
SMARCAD1-202ENST00000359052 STAG1Q8WVM7 1258 aa3.25□□□□□ -1.89
SMARCAD1-202ENST00000359052 FAM217BQ9NTX9 383 aaPredicted RBP3.25□□□□□ -1.89
SMARCAD1-202ENST00000359052 VIL1P09327 827 aaKnown RBP3.24□□□□□ -1.89
SMARCAD1-202ENST00000359052 C1orf216Q8TAB5 229 aa3.24□□□□□ -1.89
SMARCAD1-202ENST00000359052 C3orf80F5H4A9 247 aa3.24□□□□□ -1.89
SMARCAD1-202ENST00000359052 DDRGK1Q96HY6 314 aa3.24□□□□□ -1.89
SMARCAD1-202ENST00000359052 TBC1D2Q9BYX2 928 aa3.24□□□□□ -1.89
SMARCAD1-202ENST00000359052 PPRC1Q5VV67 1664 aaKnown RBP3.23□□□□□ -1.89
SMARCAD1-202ENST00000359052 ZNF316A6NFI3 1004 aaPredicted RBP3.23□□□□□ -1.89
SMARCAD1-202ENST00000359052 SOX12O15370 315 aa3.23□□□□□ -1.89
SMARCAD1-202ENST00000359052 PDIA4P13667 645 aaKnown RBP3.23□□□□□ -1.89
SMARCAD1-202ENST00000359052 SETD1BQ9UPS6 1966 aaKnown RBP3.23□□□□□ -1.89
SMARCAD1-202ENST00000359052 PROCA1Q8NCQ7 364 aaPredicted RBP3.23□□□□□ -1.89
SMARCAD1-202ENST00000359052 TTBK1Q5TCY1 1321 aaPredicted RBP3.23□□□□□ -1.89
SMARCAD1-202ENST00000359052 ZNF16P17020 682 aaPredicted RBP3.23□□□□□ -1.89
SMARCAD1-202ENST00000359052 ZNF662Q6ZS27 426 aa3.23□□□□□ -1.89
SMARCAD1-202ENST00000359052 MYSM1Q5VVJ2 828 aa3.22□□□□□ -1.89
SMARCAD1-202ENST00000359052 GIMAP6Q6P9H5 292 aa3.22□□□□□ -1.89
SMARCAD1-202ENST00000359052 WIZO95785 1651 aa3.22□□□□□ -1.89
SMARCAD1-202ENST00000359052 LAMC3Q9Y6N6 1575 aa3.22□□□□□ -1.89
SMARCAD1-202ENST00000359052 PABPN1Q86U42 306 aaKnown RBP eCLIP3.22□□□□□ -1.89
SMARCAD1-202ENST00000359052 PHTF2Q8N3S3 785 aa3.22□□□□□ -1.89
SMARCAD1-202ENST00000359052 LILRB3O75022 631 aa3.22□□□□□ -1.89
SMARCAD1-202ENST00000359052 EVI5LQ96CN4 794 aa3.22□□□□□ -1.89
SMARCAD1-202ENST00000359052 TOP2AP11388 1531 aaKnown RBP3.21□□□□□ -1.89
SMARCAD1-202ENST00000359052 GIGYF2Q6Y7W6 1299 aaKnown RBP3.21□□□□□ -1.9
SMARCAD1-202ENST00000359052 BRINP2Q9C0B6 783 aa3.21□□□□□ -1.9
SMARCAD1-202ENST00000359052 RPS6KL1Q9Y6S9 549 aa3.21□□□□□ -1.9
SMARCAD1-202ENST00000359052 CARNS1A5YM72 827 aa3.21□□□□□ -1.9
SMARCAD1-202ENST00000359052 SSFA2P28290 1259 aa3.21□□□□□ -1.9
SMARCAD1-202ENST00000359052 OCLNQ16625 522 aa3.21□□□□□ -1.9
SMARCAD1-202ENST00000359052 CC2D2BQ6DHV5 1058 aa3.21□□□□□ -1.9
SMARCAD1-202ENST00000359052 RBM46Q8TBY0 533 aaKnown RBP3.21□□□□□ -1.9
SMARCAD1-202ENST00000359052 SGSM3Q96HU1 749 aa3.21□□□□□ -1.9
SMARCAD1-202ENST00000359052 SLC43A3Q8NBI5 491 aa3.2□□□□□ -1.9
SMARCAD1-202ENST00000359052 OTUD5Q96G74 571 aa3.2□□□□□ -1.9
SMARCAD1-202ENST00000359052 CDCA7Q9BWT1 371 aaPredicted RBP3.2□□□□□ -1.9
SMARCAD1-202ENST00000359052 PBRM1Q86U86 1689 aa3.2□□□□□ -1.9
SMARCAD1-202ENST00000359052 SERINC3Q13530 473 aa3.2□□□□□ -1.9
SMARCAD1-202ENST00000359052 IFNL1Q8IU54 200 aa3.2□□□□□ -1.9
SMARCAD1-202ENST00000359052 JMYQ8N9B5 988 aa3.2□□□□□ -1.9
SMARCAD1-202ENST00000359052 RYDENQ9NUL5 291 aaKnown RBP3.2□□□□□ -1.9
SMARCAD1-202ENST00000359052 CLASP1Q7Z460 1538 aa3.2□□□□□ -1.9
SMARCAD1-202ENST00000359052 STK25O00506 426 aa3.19□□□□□ -1.9
SMARCAD1-202ENST00000359052 PHF8Q9UPP1 1060 aa3.19□□□□□ -1.9
SMARCAD1-202ENST00000359052 CAPNS1P04632 268 aa3.19□□□□□ -1.9
SMARCAD1-202ENST00000359052 COL19A1Q14993 1142 aa3.19□□□□□ -1.9
SMARCAD1-202ENST00000359052 MROH2BQ7Z745 1585 aa3.19□□□□□ -1.9
SMARCAD1-202ENST00000359052 GPIHBP1Q8IV16 184 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms