RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 SAMD1Q6SPF0 538 aaPredicted RBP10.99□□□□□ -0.65
CTNND1-201ENST00000358694 AMPHP49418 695 aa10.99□□□□□ -0.65
CTNND1-201ENST00000358694 EVA1CP58658 441 aa10.98□□□□□ -0.65
CTNND1-201ENST00000358694 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.98□□□□□ -0.65
CTNND1-201ENST00000358694 CCDC47Q96A33 483 aaKnown RBP10.98□□□□□ -0.65
CTNND1-201ENST00000358694 PHF23Q9BUL5 403 aaPredicted RBP10.98□□□□□ -0.65
CTNND1-201ENST00000358694 SMC4Q9NTJ3 1288 aa10.98□□□□□ -0.65
CTNND1-201ENST00000358694 GPS2Q13227 327 aa10.98□□□□□ -0.65
CTNND1-201ENST00000358694 PAF1Q8N7H5 531 aa10.97□□□□□ -0.65
CTNND1-201ENST00000358694 R3HCC1Q9Y3T6 440 aaKnown RBP10.97□□□□□ -0.65
CTNND1-201ENST00000358694 EID1Q9Y6B2 187 aa10.97□□□□□ -0.65
CTNND1-201ENST00000358694 IPO7O95373 1038 aaKnown RBP10.97□□□□□ -0.65
CTNND1-201ENST00000358694 GOLGA6L19H0YKK7 550 aa10.97□□□□□ -0.65
CTNND1-201ENST00000358694 ODF2Q5BJF6 829 aa10.97□□□□□ -0.65
CTNND1-201ENST00000358694 CT47A1Q5JQC4 288 aaPredicted RBP10.97□□□□□ -0.65
CTNND1-201ENST00000358694 SIN3AQ96ST3 1273 aa10.97□□□□□ -0.65
CTNND1-201ENST00000358694 PMFBP1Q8TBY8 1022 aa10.96□□□□□ -0.65
CTNND1-201ENST00000358694 CCNB3Q8WWL7 1395 aa10.96□□□□□ -0.65
CTNND1-201ENST00000358694 BECN2A8MW95 431 aa10.96□□□□□ -0.66
CTNND1-201ENST00000358694 ST18O60284 1047 aa10.95□□□□□ -0.66
CTNND1-201ENST00000358694 MCTP1Q6DN14 999 aa10.95□□□□□ -0.66
CTNND1-201ENST00000358694 KTN1Q86UP2 1357 aaKnown RBP10.95□□□□□ -0.66
CTNND1-201ENST00000358694 TRIM29Q14134 588 aa10.95□□□□□ -0.66
CTNND1-201ENST00000358694 AEBP2Q6ZN18 517 aaPredicted RBP10.95□□□□□ -0.66
CTNND1-201ENST00000358694 CHMP4CQ96CF2 233 aa10.95□□□□□ -0.66
CTNND1-201ENST00000358694 VPS37DQ86XT2 251 aa10.95□□□□□ -0.66
CTNND1-201ENST00000358694 ERCC6Q03468 1493 aa10.94□□□□□ -0.66
CTNND1-201ENST00000358694 ANKRD20A12PQ8NF67 263 aa10.94□□□□□ -0.66
CTNND1-201ENST00000358694 RILPL2Q969X0 211 aa10.93□□□□□ -0.66
CTNND1-201ENST00000358694 NUTM2FA1L443 756 aa10.93□□□□□ -0.66
CTNND1-201ENST00000358694 APPP05067 770 aa10.92□□□□□ -0.66
CTNND1-201ENST00000358694 CPLX2Q6PUV4 134 aaKnown RBP10.92□□□□□ -0.66
CTNND1-201ENST00000358694 ZFYVE27Q5T4F4 411 aa10.92□□□□□ -0.66
CTNND1-201ENST00000358694 NGEFQ8N5V2 710 aa10.92□□□□□ -0.66
CTNND1-201ENST00000358694 NAP1L1P55209 391 aaKnown RBP10.92□□□□□ -0.66
CTNND1-201ENST00000358694 LMOD3Q0VAK6 560 aa10.92□□□□□ -0.66
CTNND1-201ENST00000358694 C1orf141Q5JVX7 400 aa10.92□□□□□ -0.66
CTNND1-201ENST00000358694 ZNF592Q92610 1267 aa10.91□□□□□ -0.66
CTNND1-201ENST00000358694 TERF2IPQ9NYB0 399 aa10.91□□□□□ -0.66
CTNND1-201ENST00000358694 LRRFIP1Q32MZ4 808 aaKnown RBP10.91□□□□□ -0.66
CTNND1-201ENST00000358694 CLUAP1Q96AJ1 413 aa10.91□□□□□ -0.66
CTNND1-201ENST00000358694 SYTL4Q96C24 671 aaPredicted RBP10.91□□□□□ -0.66
CTNND1-201ENST00000358694 FOXD4L6Q3SYB3 417 aaPredicted RBP10.91□□□□□ -0.66
CTNND1-201ENST00000358694 FOXD4L3Q6VB84 417 aaPredicted RBP10.91□□□□□ -0.66
CTNND1-201ENST00000358694 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.9□□□□□ -0.66
CTNND1-201ENST00000358694 RCAN3Q9UKA8 241 aa10.9□□□□□ -0.66
CTNND1-201ENST00000358694 CDR1P51861 262 aa10.9□□□□□ -0.66
CTNND1-201ENST00000358694 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.9□□□□□ -0.672e-8■□□□□ 11.3
CTNND1-201ENST00000358694 TMEM132AQ24JP5 1023 aa10.89□□□□□ -0.67
CTNND1-201ENST00000358694 TTC5Q8N0Z6 440 aa10.89□□□□□ -0.67
CTNND1-201ENST00000358694 WWC2Q6AWC2 1192 aa10.89□□□□□ -0.67
CTNND1-201ENST00000358694 HSP90AB2PQ58FF8 381 aa10.89□□□□□ -0.67
CTNND1-201ENST00000358694 CPLX1O14810 134 aa10.88□□□□□ -0.67
CTNND1-201ENST00000358694 RUFY1Q96T51 708 aa10.88□□□□□ -0.67
CTNND1-201ENST00000358694 ATP6V1DQ9Y5K8 247 aa10.88□□□□□ -0.67
CTNND1-201ENST00000358694 NUTM2DQ5VT03 806 aaPredicted RBP10.88□□□□□ -0.67
CTNND1-201ENST00000358694 CCAR1Q8IX12 1150 aaKnown RBP10.88□□□□□ -0.67
CTNND1-201ENST00000358694 NFXL1Q6ZNB6 911 aa10.88□□□□□ -0.67
CTNND1-201ENST00000358694 RBM33Q96EV2 1170 aaKnown RBP10.88□□□□□ -0.67
CTNND1-201ENST00000358694 HOOK1Q9UJC3 728 aaKnown RBP10.87□□□□□ -0.67
CTNND1-201ENST00000358694 ERICH2A1L162 156 aa10.87□□□□□ -0.67
CTNND1-201ENST00000358694 NEXNQ0ZGT2 675 aa10.87□□□□□ -0.67
CTNND1-201ENST00000358694 DIAPH3Q9NSV4 1193 aa10.87□□□□□ -0.67
CTNND1-201ENST00000358694 ZNF771Q7L3S4 317 aaPredicted RBP10.86□□□□□ -0.67
CTNND1-201ENST00000358694 HOMER1Q86YM7 354 aa10.86□□□□□ -0.67
CTNND1-201ENST00000358694 TRDNQ13061 729 aa10.86□□□□□ -0.67
CTNND1-201ENST00000358694 AK7Q96M32 723 aa10.86□□□□□ -0.67
CTNND1-201ENST00000358694 CCDC146Q8IYE0 955 aa10.86□□□□□ -0.67
CTNND1-201ENST00000358694 EPS15P42566 896 aa10.86□□□□□ -0.67
CTNND1-201ENST00000358694 ROCK2O75116 1388 aaKnown RBP10.86□□□□□ -0.67
CTNND1-201ENST00000358694 VSIG10Q8N0Z9 540 aa10.85□□□□□ -0.67
CTNND1-201ENST00000358694 RDXP35241 583 aaKnown RBP10.85□□□□□ -0.67
CTNND1-201ENST00000358694 EIF3AQ14152 1382 aaKnown RBP10.85□□□□□ -0.67
CTNND1-201ENST00000358694 DCAF1Q9Y4B6 1507 aa10.84□□□□□ -0.67
CTNND1-201ENST00000358694 TEFQ10587 303 aa10.84□□□□□ -0.67
CTNND1-201ENST00000358694 OFD1O75665 1012 aa10.84□□□□□ -0.67
CTNND1-201ENST00000358694 IKQ13123 557 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-201ENST00000358694 PKD2Q13563 968 aa10.84□□□□□ -0.67
CTNND1-201ENST00000358694 TEX35Q5T0J7 233 aa10.84□□□□□ -0.67
CTNND1-201ENST00000358694 C9orf78Q9NZ63 289 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-201ENST00000358694 CENPJQ9HC77 1338 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-201ENST00000358694 EIF2S2P20042 333 aaKnown RBP10.83□□□□□ -0.68
CTNND1-201ENST00000358694 ANO2Q9NQ90 1003 aa10.83□□□□□ -0.68
CTNND1-201ENST00000358694 FYB1O15117 783 aa10.83□□□□□ -0.68
CTNND1-201ENST00000358694 CCDC173Q0VFZ6 552 aa10.83□□□□□ -0.68
CTNND1-201ENST00000358694 DDX11L8A8MPP1 907 aa10.83□□□□□ -0.68
CTNND1-201ENST00000358694 HSPA5P11021 654 aaKnown RBP10.83□□□□□ -0.68
CTNND1-201ENST00000358694 DDX49Q9Y6V7 483 aaKnown RBP10.83□□□□□ -0.68
CTNND1-201ENST00000358694 ELL2O00472 640 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-201ENST00000358694 ZKSCAN1P17029 563 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-201ENST00000358694 RUFY2Q8WXA3 655 aa10.82□□□□□ -0.68
CTNND1-201ENST00000358694 RALBP1Q15311 655 aa10.82□□□□□ -0.68
CTNND1-201ENST00000358694 MAP7D2Q96T17 732 aa10.82□□□□□ -0.68
CTNND1-201ENST00000358694 BICD2Q8TD16 824 aa10.82□□□□□ -0.68
CTNND1-201ENST00000358694 MTMR7Q9Y216 660 aa10.82□□□□□ -0.68
CTNND1-201ENST00000358694 IFIT2P09913 472 aaKnown RBP10.81□□□□□ -0.68
CTNND1-201ENST00000358694 SLC4A3P48751 1232 aa10.81□□□□□ -0.68
CTNND1-201ENST00000358694 ANKRD45Q5TZF3 282 aa10.81□□□□□ -0.68
CTNND1-201ENST00000358694 EIF4G1Q04637 1599 aaKnown RBP10.81□□□□□ -0.68
CTNND1-201ENST00000358694 GOLGA3Q08378 1498 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms