RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 SLC4A10Q6U841 1118 aa13.64□□□□□ -0.23
GTF3C1-201ENST00000356183 MARCH6O60337 910 aa13.63□□□□□ -0.23
GTF3C1-201ENST00000356183 BECN2A8MW95 431 aa13.63□□□□□ -0.23
GTF3C1-201ENST00000356183 U2AF1L5P0DN76 240 aaPredicted RBP13.63□□□□□ -0.23
GTF3C1-201ENST00000356183 U2AF1Q01081 240 aaKnown RBP eCLIP13.63□□□□□ -0.23
GTF3C1-201ENST00000356183 SOGA1O94964 1423 aa13.63□□□□□ -0.23
GTF3C1-201ENST00000356183 PDE4AP27815 886 aa13.62□□□□□ -0.23
GTF3C1-201ENST00000356183 TOMM22Q9NS69 142 aa13.62□□□□□ -0.23
GTF3C1-201ENST00000356183 CCDC9Q9Y3X0 531 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-201ENST00000356183 NOM1Q5C9Z4 860 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-201ENST00000356183 PCMTD1Q96MG8 357 aaPredicted RBP13.62□□□□□ -0.23
GTF3C1-201ENST00000356183 TPM2P07951 284 aa13.61□□□□□ -0.23
GTF3C1-201ENST00000356183 CECR2Q9BXF3 1484 aa13.61□□□□□ -0.23
GTF3C1-201ENST00000356183 SKOR2Q2VWA4 1001 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-201ENST00000356183 FBXW7Q969H0 707 aa13.61□□□□□ -0.23
GTF3C1-201ENST00000356183 RAB3GAP2Q9H2M9 1393 aa13.61□□□□□ -0.23
GTF3C1-201ENST00000356183 STK26Q9P289 416 aa13.61□□□□□ -0.23
GTF3C1-201ENST00000356183 HOMER1Q86YM7 354 aa13.6□□□□□ -0.23
GTF3C1-201ENST00000356183 TPM1P09493 284 aa13.6□□□□□ -0.23
GTF3C1-201ENST00000356183 RILPL2Q969X0 211 aa13.6□□□□□ -0.23
GTF3C1-201ENST00000356183 FAM184AQ8NB25 1140 aa13.6□□□□□ -0.23
GTF3C1-201ENST00000356183 MAP7D2Q96T17 732 aa13.59□□□□□ -0.23
GTF3C1-201ENST00000356183 MCTP1Q6DN14 999 aa13.58□□□□□ -0.24
GTF3C1-201ENST00000356183 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.58□□□□□ -0.24
GTF3C1-201ENST00000356183 PKNOX2Q96KN3 472 aa13.58□□□□□ -0.24
GTF3C1-201ENST00000356183 PAK3O75914 559 aaPredicted RBP13.57□□□□□ -0.24
GTF3C1-201ENST00000356183 FOXD1Q16676 465 aa13.57□□□□□ -0.24
GTF3C1-201ENST00000356183 HMMRO75330 724 aa13.57□□□□□ -0.24
GTF3C1-201ENST00000356183 AK7Q96M32 723 aa13.56□□□□□ -0.24
GTF3C1-201ENST00000356183 RUFY1Q96T51 708 aa13.56□□□□□ -0.24
GTF3C1-201ENST00000356183 STK31Q9BXU1 1019 aa13.56□□□□□ -0.24
GTF3C1-201ENST00000356183 HDGFL2Q7Z4V5 671 aaPredicted RBP13.56□□□□□ -0.24
GTF3C1-201ENST00000356183 RALBP1Q15311 655 aa13.56□□□□□ -0.24
GTF3C1-201ENST00000356183 FAM161AQ3B820 660 aa13.56□□□□□ -0.24
GTF3C1-201ENST00000356183 R3HCC1Q9Y3T6 440 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-201ENST00000356183 CENPJQ9HC77 1338 aaPredicted RBP13.56□□□□□ -0.24
GTF3C1-201ENST00000356183 ROCK2O75116 1388 aaKnown RBP13.55□□□□□ -0.24
GTF3C1-201ENST00000356183 FAM43AQ8N2R8 423 aa13.55□□□□□ -0.24
GTF3C1-201ENST00000356183 PDE3BQ13370 1112 aa13.55□□□□□ -0.24
GTF3C1-201ENST00000356183 DHX57Q6P158 1386 aaKnown RBP13.55□□□□□ -0.24
GTF3C1-201ENST00000356183 PLIN1O60240 522 aa13.54□□□□□ -0.24
GTF3C1-201ENST00000356183 TRHP20396 242 aaPredicted RBP13.54□□□□□ -0.24
GTF3C1-201ENST00000356183 PLCD4Q9BRC7 762 aa13.54□□□□□ -0.24
GTF3C1-201ENST00000356183 ZBED9Q6R2W3 1325 aa13.54□□□□□ -0.24
GTF3C1-201ENST00000356183 ANKRD45Q5TZF3 282 aa13.54□□□□□ -0.24
GTF3C1-201ENST00000356183 FHAD1B1AJZ9 1412 aa13.53□□□□□ -0.24
GTF3C1-201ENST00000356183 IFT57Q9NWB7 429 aa13.53□□□□□ -0.24
GTF3C1-201ENST00000356183 KIF3AQ9Y496 699 aa13.53□□□□□ -0.24
GTF3C1-201ENST00000356183 KANK4Q5T7N3 995 aaPredicted RBP13.53□□□□□ -0.24
GTF3C1-201ENST00000356183 SPAG9O60271 1321 aaKnown RBP13.52□□□□□ -0.24
GTF3C1-201ENST00000356183 SKIDA1Q1XH10 827 aa13.52□□□□□ -0.24
GTF3C1-201ENST00000356183 CSB-PGBD3P0DP91 1061 aa13.52□□□□□ -0.25
GTF3C1-201ENST00000356183 FOSBP53539 338 aa13.51□□□□□ -0.25
GTF3C1-201ENST00000356183 NAP1L1P55209 391 aaKnown RBP13.51□□□□□ -0.25
GTF3C1-201ENST00000356183 G3V3G9 751 aa13.51□□□□□ -0.25
GTF3C1-201ENST00000356183 DCAF8Q5TAQ9 597 aa13.51□□□□□ -0.25
GTF3C1-201ENST00000356183 KANK1Q14678 1352 aa13.51□□□□□ -0.25
GTF3C1-201ENST00000356183 CENPQQ7L2Z9 268 aaPredicted RBP13.51□□□□□ -0.25
GTF3C1-201ENST00000356183 RDXP35241 583 aaKnown RBP13.51□□□□□ -0.25
GTF3C1-201ENST00000356183 MNS1Q8NEH6 495 aa13.51□□□□□ -0.25
GTF3C1-201ENST00000356183 TMX4Q9H1E5 349 aaPredicted RBP13.51□□□□□ -0.25
GTF3C1-201ENST00000356183 CRBNQ96SW2 442 aa13.5□□□□□ -0.25
GTF3C1-201ENST00000356183 ATP6V1DQ9Y5K8 247 aa13.5□□□□□ -0.25
GTF3C1-201ENST00000356183 RBM10P98175 930 aaKnown RBP13.5□□□□□ -0.25
GTF3C1-201ENST00000356183 ARGLU1Q9NWB6 273 aaPredicted RBP13.5□□□□□ -0.25
GTF3C1-201ENST00000356183 AKAP17AQ02040 695 aaKnown RBP13.49□□□□□ -0.25
GTF3C1-201ENST00000356183 H0YHG0 523 aa13.49□□□□□ -0.25
GTF3C1-201ENST00000356183 IL27Q8NEV9 243 aa13.49□□□□□ -0.25
GTF3C1-201ENST00000356183 MROH2BQ7Z745 1585 aa13.49□□□□□ -0.25
GTF3C1-201ENST00000356183 CCDC88BA6NC98 1476 aa13.49□□□□□ -0.25
GTF3C1-201ENST00000356183 EXOC6Q8TAG9 804 aa13.49□□□□□ -0.25
GTF3C1-201ENST00000356183 BICD2Q8TD16 824 aa13.49□□□□□ -0.25
GTF3C1-201ENST00000356183 RRP7AQ9Y3A4 280 aaKnown RBP13.49□□□□□ -0.25
GTF3C1-201ENST00000356183 PODXL2Q9NZ53 605 aa13.48□□□□□ -0.25
GTF3C1-201ENST00000356183 FRAT2O75474 233 aaPredicted RBP13.48□□□□□ -0.25
GTF3C1-201ENST00000356183 IPO7O95373 1038 aaKnown RBP13.48□□□□□ -0.25
GTF3C1-201ENST00000356183 ANO2Q9NQ90 1003 aa13.48□□□□□ -0.25
GTF3C1-201ENST00000356183 DHX37Q8IY37 1157 aaKnown RBP13.48□□□□□ -0.25
GTF3C1-201ENST00000356183 MLECQ14165 292 aa13.48□□□□□ -0.25
GTF3C1-201ENST00000356183 ACBD3Q9H3P7 528 aa13.48□□□□□ -0.25
GTF3C1-201ENST00000356183 CWC15Q9P013 229 aaKnown RBP13.48□□□□□ -0.25
GTF3C1-201ENST00000356183 BCL2L13Q9BXK5 485 aa13.47□□□□□ -0.25
GTF3C1-201ENST00000356183 RRP1P56182 461 aaKnown RBP13.47□□□□□ -0.25
GTF3C1-201ENST00000356183 SASS6Q6UVJ0 657 aa13.47□□□□□ -0.25
GTF3C1-201ENST00000356183 ARHGAP35Q9NRY4 1499 aa13.47□□□□□ -0.25
GTF3C1-201ENST00000356183 HSP90AB3PQ58FF7 597 aa13.47□□□□□ -0.25
GTF3C1-201ENST00000356183 NFKBIBQ15653 356 aa13.47□□□□□ -0.25
GTF3C1-201ENST00000356183 HSP90B2PQ58FF3 399 aa13.46□□□□□ -0.26
GTF3C1-201ENST00000356183 TTLL5Q6EMB2 1281 aa13.46□□□□□ -0.26
GTF3C1-201ENST00000356183 CCDC191Q8NCU4 936 aa13.46□□□□□ -0.26
GTF3C1-201ENST00000356183 RAD21O60216 631 aa13.45□□□□□ -0.26
GTF3C1-201ENST00000356183 TRIM29Q14134 588 aa13.45□□□□□ -0.26
GTF3C1-201ENST00000356183 CDR1P51861 262 aa13.45□□□□□ -0.26
GTF3C1-201ENST00000356183 ANKRD20A12PQ8NF67 263 aa13.45□□□□□ -0.26
GTF3C1-201ENST00000356183 ABCC8Q09428 1581 aa13.44□□□□□ -0.26
GTF3C1-201ENST00000356183 PDILTQ8N807 584 aa13.44□□□□□ -0.26
GTF3C1-201ENST00000356183 CAGE1Q8TC20 777 aa13.44□□□□□ -0.26
GTF3C1-201ENST00000356183 CCDC39Q9UFE4 941 aa13.44□□□□□ -0.26
GTF3C1-201ENST00000356183 EIF4G1Q04637 1599 aaKnown RBP13.44□□□□□ -0.26
GTF3C1-201ENST00000356183 PRKRIP1Q9H875 184 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms