RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 TMEM121BQ9BXQ6 578 aaPredicted RBP3.39□□□□□ -1.87
SMARCAD1-201ENST00000354268 RPS6KL1Q9Y6S9 549 aa3.39□□□□□ -1.87
SMARCAD1-201ENST00000354268 ERCC6Q03468 1493 aa3.39□□□□□ -1.87
SMARCAD1-201ENST00000354268 SETD1BQ9UPS6 1966 aaKnown RBP3.39□□□□□ -1.87
SMARCAD1-201ENST00000354268 POM121CA8CG34 1229 aa3.39□□□□□ -1.87
SMARCAD1-201ENST00000354268 MEX3CQ5U5Q3 659 aaKnown RBP3.39□□□□□ -1.87
SMARCAD1-201ENST00000354268 AIDAQ96BJ3 306 aa3.39□□□□□ -1.87
SMARCAD1-201ENST00000354268 SPATA32Q96LK8 384 aa3.38□□□□□ -1.87
SMARCAD1-201ENST00000354268 ZMIZ1Q9ULJ6 1067 aa3.38□□□□□ -1.87
SMARCAD1-201ENST00000354268 PSME1Q06323 249 aa3.38□□□□□ -1.87
SMARCAD1-201ENST00000354268 PIP4P2Q8N4L2 257 aa3.38□□□□□ -1.87
SMARCAD1-201ENST00000354268 UBE2Q2Q8WVN8 375 aa3.38□□□□□ -1.87
SMARCAD1-201ENST00000354268 SND1Q7KZF4 910 aaKnown RBP eCLIP3.38□□□□□ -1.87
SMARCAD1-201ENST00000354268 C16orf71Q8IYS4 520 aaPredicted RBP3.38□□□□□ -1.87
SMARCAD1-201ENST00000354268 STAG1Q8WVM7 1258 aa3.38□□□□□ -1.87
SMARCAD1-201ENST00000354268 ZRANB1Q9UGI0 708 aa3.38□□□□□ -1.87
SMARCAD1-201ENST00000354268 CCDC61Q9Y6R9 512 aa3.38□□□□□ -1.87
SMARCAD1-201ENST00000354268 ELOAQ14241 798 aaKnown RBP3.37□□□□□ -1.87
SMARCAD1-201ENST00000354268 PPP1R1BQ9UD71 204 aaPredicted RBP3.37□□□□□ -1.87
SMARCAD1-201ENST00000354268 BRD1O95696 1058 aa3.37□□□□□ -1.87
SMARCAD1-201ENST00000354268 MYT1LQ9UL68 1186 aa3.37□□□□□ -1.87
SMARCAD1-201ENST00000354268 KIF7Q2M1P5 1343 aa3.37□□□□□ -1.87
SMARCAD1-201ENST00000354268 FLIIQ13045 1269 aa3.37□□□□□ -1.87
SMARCAD1-201ENST00000354268 EGFLAMQ63HQ2 1017 aa3.37□□□□□ -1.87
SMARCAD1-201ENST00000354268 GIMAP6Q6P9H5 292 aa3.37□□□□□ -1.87
SMARCAD1-201ENST00000354268 ALG2Q9H553 416 aa3.37□□□□□ -1.87
SMARCAD1-201ENST00000354268 MKRN1Q9UHC7 482 aaKnown RBP3.37□□□□□ -1.87
SMARCAD1-201ENST00000354268 PPP1R3GB7ZBB8 358 aa3.36□□□□□ -1.87
SMARCAD1-201ENST00000354268 E2F4Q16254 413 aa3.36□□□□□ -1.87
SMARCAD1-201ENST00000354268 KANK4Q5T7N3 995 aaPredicted RBP3.36□□□□□ -1.87
SMARCAD1-201ENST00000354268 C19orf67A6NJJ6 358 aa3.36□□□□□ -1.87
SMARCAD1-201ENST00000354268 CCDC102AQ96A19 550 aa3.36□□□□□ -1.87
SMARCAD1-201ENST00000354268 GMLQ99445 158 aa3.36□□□□□ -1.87
SMARCAD1-201ENST00000354268 SNRKQ9NRH2 765 aa3.36□□□□□ -1.87
SMARCAD1-201ENST00000354268 CHIC2Q9UKJ5 165 aa3.36□□□□□ -1.87
SMARCAD1-201ENST00000354268 MAP2K5Q13163 448 aa3.35□□□□□ -1.87
SMARCAD1-201ENST00000354268 TINF2Q9BSI4 451 aa3.35□□□□□ -1.87
SMARCAD1-201ENST00000354268 BCL11BQ9C0K0 894 aaPredicted RBP3.35□□□□□ -1.87
SMARCAD1-201ENST00000354268 PDIA4P13667 645 aaKnown RBP3.35□□□□□ -1.87
SMARCAD1-201ENST00000354268 PTGDRQ13258 359 aa3.35□□□□□ -1.87
SMARCAD1-201ENST00000354268 BEGAINQ9BUH8 593 aa3.35□□□□□ -1.87
SMARCAD1-201ENST00000354268 TBX22Q9Y458 520 aa3.35□□□□□ -1.87
SMARCAD1-201ENST00000354268 POTEIP0CG38 1075 aa3.34□□□□□ -1.87
SMARCAD1-201ENST00000354268 RANGAP1P46060 587 aaPredicted RBP3.34□□□□□ -1.87
SMARCAD1-201ENST00000354268 CHRDL2Q6WN34 429 aa3.34□□□□□ -1.87
SMARCAD1-201ENST00000354268 CC2D2BQ6DHV5 1058 aa3.34□□□□□ -1.87
SMARCAD1-201ENST00000354268 RBM46Q8TBY0 533 aaKnown RBP3.34□□□□□ -1.87
SMARCAD1-201ENST00000354268 CDCA7Q9BWT1 371 aaPredicted RBP3.34□□□□□ -1.87
SMARCAD1-201ENST00000354268 TRIM34Q9BYJ4 488 aa3.34□□□□□ -1.87
SMARCAD1-201ENST00000354268 ANKRD13DQ6ZTN6 518 aa3.34□□□□□ -1.88
SMARCAD1-201ENST00000354268 TBC1D2Q9BYX2 928 aa3.33□□□□□ -1.88
SMARCAD1-201ENST00000354268 NME8Q8N427 588 aa3.33□□□□□ -1.88
SMARCAD1-201ENST00000354268 PROCA1Q8NCQ7 364 aaPredicted RBP3.33□□□□□ -1.88
SMARCAD1-201ENST00000354268 AKT1S1Q96B36 256 aa3.33□□□□□ -1.88
SMARCAD1-201ENST00000354268 RAD21O60216 631 aa3.33□□□□□ -1.88
SMARCAD1-201ENST00000354268 MINK1Q8N4C8 1332 aaPredicted RBP3.33□□□□□ -1.88
SMARCAD1-201ENST00000354268 OCSTAMPQ9BR26 566 aa3.33□□□□□ -1.88
SMARCAD1-201ENST00000354268 ZNF16P17020 682 aaPredicted RBP3.32□□□□□ -1.88
SMARCAD1-201ENST00000354268 PELP1Q8IZL8 1130 aaKnown RBP3.32□□□□□ -1.88
SMARCAD1-201ENST00000354268 GZF1Q9H116 711 aaPredicted RBP3.32□□□□□ -1.88
SMARCAD1-201ENST00000354268 HSP90B1P14625 803 aaKnown RBP3.32□□□□□ -1.88
SMARCAD1-201ENST00000354268 CERS3Q8IU89 383 aa3.32□□□□□ -1.88
SMARCAD1-201ENST00000354268 EIF4E1BA6NMX2 242 aaKnown RBP3.32□□□□□ -1.88
SMARCAD1-201ENST00000354268 TAGLNQ01995 201 aaKnown RBP3.32□□□□□ -1.88
SMARCAD1-201ENST00000354268 VIL1P09327 827 aaKnown RBP3.32□□□□□ -1.88
SMARCAD1-201ENST00000354268 CBLBQ13191 982 aa3.32□□□□□ -1.88
SMARCAD1-201ENST00000354268 WASHC2AQ641Q2 1341 aa3.32□□□□□ -1.88
SMARCAD1-201ENST00000354268 C3orf80F5H4A9 247 aa3.31□□□□□ -1.88
SMARCAD1-201ENST00000354268 USTQ9Y2C2 406 aa3.31□□□□□ -1.88
SMARCAD1-201ENST00000354268 RBL2Q08999 1139 aa3.31□□□□□ -1.88
SMARCAD1-201ENST00000354268 BANK1Q8NDB2 785 aa3.31□□□□□ -1.88
SMARCAD1-201ENST00000354268 SERPINA10Q9UK55 444 aa3.31□□□□□ -1.88
SMARCAD1-201ENST00000354268 PPP4CP60510 307 aa3.31□□□□□ -1.88
SMARCAD1-201ENST00000354268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.3□□□□□ -1.88
SMARCAD1-201ENST00000354268 EXOC5O00471 708 aa3.3□□□□□ -1.88
SMARCAD1-201ENST00000354268 HNRNPUL2Q1KMD3 747 aaKnown RBP3.3□□□□□ -1.88
SMARCAD1-201ENST00000354268 SPDYE2BA6NHP3 402 aa3.3□□□□□ -1.88
SMARCAD1-201ENST00000354268 SPDYE5A6NIY4 337 aa3.3□□□□□ -1.88
SMARCAD1-201ENST00000354268 IGF1RP08069 1367 aa3.3□□□□□ -1.88
SMARCAD1-201ENST00000354268 SPDYE6P0CI01 402 aa3.3□□□□□ -1.88
SMARCAD1-201ENST00000354268 SPDYE2Q495Y8 402 aa3.3□□□□□ -1.88
SMARCAD1-201ENST00000354268 BICRAQ9NZM4 1560 aa3.29□□□□□ -1.88
SMARCAD1-201ENST00000354268 ATG7O95352 703 aa3.29□□□□□ -1.88
SMARCAD1-201ENST00000354268 REM2Q8IYK8 340 aaPredicted RBP3.29□□□□□ -1.88
SMARCAD1-201ENST00000354268 RSPH4AQ5TD94 716 aa3.29□□□□□ -1.88
SMARCAD1-201ENST00000354268 POTEEQ6S8J3 1075 aa3.29□□□□□ -1.88
SMARCAD1-201ENST00000354268 TMEM92Q6UXU6 159 aa3.29□□□□□ -1.88
SMARCAD1-201ENST00000354268 PPP1R15AO75807 674 aaPredicted RBP3.28□□□□□ -1.88
SMARCAD1-201ENST00000354268 NPR3P17342 541 aa3.28□□□□□ -1.88
SMARCAD1-201ENST00000354268 LCE2DQ5TA82 110 aaPredicted RBP3.28□□□□□ -1.88
SMARCAD1-201ENST00000354268 KIF12Q96FN5 646 aa3.28□□□□□ -1.88
SMARCAD1-201ENST00000354268 ZNF777Q9ULD5 760 aaPredicted RBP3.28□□□□□ -1.88
SMARCAD1-201ENST00000354268 AXDND1Q5T1B0 1012 aaPredicted RBP3.28□□□□□ -1.88
SMARCAD1-201ENST00000354268 MYSM1Q5VVJ2 828 aa3.28□□□□□ -1.88
SMARCAD1-201ENST00000354268 OTUD5Q96G74 571 aa3.28□□□□□ -1.88
SMARCAD1-201ENST00000354268 PIF1Q9H611 641 aa3.27□□□□□ -1.89
SMARCAD1-201ENST00000354268 FAM217BQ9NTX9 383 aaPredicted RBP3.27□□□□□ -1.89
SMARCAD1-201ENST00000354268 SENP3-EIF4A1A0A087X0R7 540 aa3.27□□□□□ -1.89
SMARCAD1-201ENST00000354268 ARHGEF6Q15052 776 aa3.27□□□□□ -1.89
SMARCAD1-201ENST00000354268 SERINC3Q13530 473 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms