RNA–Protein interactions for RNA: ENST00000351986.10

NPM1-202, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-202ENST00000351986 IRX2Q9BZI1 471 aaPredicted RBP12.21□□□□□ -0.45
NPM1-202ENST00000351986 TYW1BQ6NUM6 668 aa12.2□□□□□ -0.46
NPM1-202ENST00000351986 ANKK1Q8NFD2 765 aa12.2□□□□□ -0.46
NPM1-202ENST00000351986 KIAA1468Q9P260 1216 aa12.2□□□□□ -0.46
NPM1-202ENST00000351986 RGS20O76081 388 aa12.19□□□□□ -0.46
NPM1-202ENST00000351986 PHF14O94880 888 aa12.18□□□□□ -0.46
NPM1-202ENST00000351986 SEPT9Q9UHD8 586 aaPredicted RBP12.18□□□□□ -0.46
NPM1-202ENST00000351986 DPYSL4O14531 572 aa12.16□□□□□ -0.46
NPM1-202ENST00000351986 FBXW7Q969H0 707 aa12.16□□□□□ -0.46
NPM1-202ENST00000351986 SOWAHBA6NEL2 793 aa12.15□□□□□ -0.46
NPM1-202ENST00000351986 RBM33Q96EV2 1170 aaKnown RBP12.15□□□□□ -0.46
NPM1-202ENST00000351986 ZFRQ96KR1 1074 aaKnown RBP12.15□□□□□ -0.46
NPM1-202ENST00000351986 C6orf132Q5T0Z8 1188 aa12.14□□□□□ -0.47
NPM1-202ENST00000351986 WBP1LQ9NX94 342 aa12.14□□□□□ -0.47
NPM1-202ENST00000351986 ITGBL1O95965 494 aaPredicted RBP12.12□□□□□ -0.47
NPM1-202ENST00000351986 DDX12PQ92771 950 aa12.11□□□□□ -0.47
NPM1-202ENST00000351986 CAMK2BQ13554 666 aa12.1□□□□□ -0.47
NPM1-202ENST00000351986 LAPTM4BQ86VI4 370 aa12.1□□□□□ -0.47
NPM1-202ENST00000351986 TRIM6-TRIM34B2RNG4 842 aa12.07□□□□□ -0.48
NPM1-202ENST00000351986 EPAS1Q99814 870 aa12.07□□□□□ -0.48
NPM1-202ENST00000351986 ONECUT3O60422 494 aaPredicted RBP12.03□□□□□ -0.48
NPM1-202ENST00000351986 KCNC4Q03721 635 aa12.03□□□□□ -0.48
NPM1-202ENST00000351986 FAM98CQ17RN3 349 aaKnown RBP12.03□□□□□ -0.48
NPM1-202ENST00000351986 TSR1Q2NL82 804 aaKnown RBP12.03□□□□□ -0.48
NPM1-202ENST00000351986 HPS5Q9UPZ3 1129 aa12.03□□□□□ -0.48
NPM1-202ENST00000351986 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.01□□□□□ -0.49
NPM1-202ENST00000351986 TSKSQ9UJT2 592 aa12.01□□□□□ -0.49
NPM1-202ENST00000351986 NBR1Q14596 966 aa11.99□□□□□ -0.49
NPM1-202ENST00000351986 Q6ZNB5 142 aa11.99□□□□□ -0.49
NPM1-202ENST00000351986 NYAP1Q6ZVC0 841 aa11.99□□□□□ -0.49
NPM1-202ENST00000351986 LRCH3Q96II8 777 aa11.99□□□□□ -0.49
NPM1-202ENST00000351986 TSR3Q9UJK0 312 aaKnown RBP11.99□□□□□ -0.49
NPM1-202ENST00000351986 SMAPO00193 183 aa11.98□□□□□ -0.49
NPM1-202ENST00000351986 MAP3K7O43318 606 aa11.97□□□□□ -0.49
NPM1-202ENST00000351986 EN1Q05925 392 aaPredicted RBP11.96□□□□□ -0.49
NPM1-202ENST00000351986 C3orf80F5H4A9 247 aa11.95□□□□□ -0.5
NPM1-202ENST00000351986 PRIM1P49642 420 aaKnown RBP11.95□□□□□ -0.5
NPM1-202ENST00000351986 FAM198AQ9UFP1 575 aa11.95□□□□□ -0.5
NPM1-202ENST00000351986 PACS2Q86VP3 889 aa11.92□□□□□ -0.5
NPM1-202ENST00000351986 PDIA6Q15084 440 aa11.91□□□□□ -0.5
NPM1-202ENST00000351986 SAMD7Q7Z3H4 446 aa11.91□□□□□ -0.5
NPM1-202ENST00000351986 PPP4CP60510 307 aa11.9□□□□□ -0.5
NPM1-202ENST00000351986 LCE2BO14633 110 aa11.89□□□□□ -0.51
NPM1-202ENST00000351986 CDCA7LQ96GN5 454 aa11.89□□□□□ -0.51
NPM1-202ENST00000351986 TJAP1Q5JTD0 557 aa11.88□□□□□ -0.51
NPM1-202ENST00000351986 GRXCR2A6NFK2 248 aa11.86□□□□□ -0.51
NPM1-202ENST00000351986 PRSS12P56730 875 aa11.85□□□□□ -0.51
NPM1-202ENST00000351986 BBXQ8WY36 941 aaPredicted RBP11.84□□□□□ -0.51
NPM1-202ENST00000351986 CDHR5Q9HBB8 845 aa11.84□□□□□ -0.51
NPM1-202ENST00000351986 GFRA3O60609 400 aa11.83□□□□□ -0.52
NPM1-202ENST00000351986 MTRQ99707 1265 aa11.83□□□□□ -0.52
NPM1-202ENST00000351986 PNMA3Q9UL41 463 aa11.83□□□□□ -0.52
NPM1-202ENST00000351986 SPDYE16A6NNV3 312 aaPredicted RBP11.82□□□□□ -0.52
NPM1-202ENST00000351986 ZNF516Q92618 1163 aa11.82□□□□□ -0.52
NPM1-202ENST00000351986 TATDN2Q93075 761 aa11.82□□□□□ -0.52
NPM1-202ENST00000351986 PRKD2Q9BZL6 878 aa11.81□□□□□ -0.52
NPM1-202ENST00000351986 RNF40O75150 1001 aa11.8□□□□□ -0.52
NPM1-202ENST00000351986 E2F4Q16254 413 aa11.79□□□□□ -0.52
NPM1-202ENST00000351986 PPP1R18Q6NYC8 613 aa11.79□□□□□ -0.52
NPM1-202ENST00000351986 NUDT18Q6ZVK8 323 aa11.78□□□□□ -0.52
NPM1-202ENST00000351986 OSBPP22059 807 aa11.77□□□□□ -0.53
NPM1-202ENST00000351986 APLP1P51693 650 aa11.77□□□□□ -0.53
NPM1-202ENST00000351986 NBPF26B4DH59 902 aa11.76□□□□□ -0.53
NPM1-202ENST00000351986 SLC24A1O60721 1099 aa11.76□□□□□ -0.53
NPM1-202ENST00000351986 TRAF7Q6Q0C0 670 aa11.76□□□□□ -0.53
NPM1-202ENST00000351986 NKX2-3Q8TAU0 364 aa11.76□□□□□ -0.53
NPM1-202ENST00000351986 IL21Q9HBE4 155 aa11.76□□□□□ -0.53
NPM1-202ENST00000351986 SPRYD3Q8NCJ5 442 aa11.75□□□□□ -0.53
NPM1-202ENST00000351986 LAPTM4AQ15012 233 aa11.74□□□□□ -0.53
NPM1-202ENST00000351986 CERKQ8TCT0 537 aa11.73□□□□□ -0.53
NPM1-202ENST00000351986 COPS2P61201 443 aa11.7□□□□□ -0.54
NPM1-202ENST00000351986 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.7□□□□□ -0.54
NPM1-202ENST00000351986 SWT1Q5T5J6 900 aaKnown RBP11.69□□□□□ -0.54
NPM1-202ENST00000351986 PADI6Q6TGC4 694 aa11.69□□□□□ -0.54
NPM1-202ENST00000351986 ARIH1Q9Y4X5 557 aaPredicted RBP11.69□□□□□ -0.54
NPM1-202ENST00000351986 CFAP44Q96MT7 982 aa11.68□□□□□ -0.54
NPM1-202ENST00000351986 NPDC1Q9NQX5 325 aaPredicted RBP11.68□□□□□ -0.54
NPM1-202ENST00000351986 WDR70Q9NW82 654 aa11.68□□□□□ -0.54
NPM1-202ENST00000351986 NRG2O14511 850 aaPredicted RBP11.67□□□□□ -0.54
NPM1-202ENST00000351986 HDGFP51858 240 aaKnown RBP11.66□□□□□ -0.54
NPM1-202ENST00000351986 PAXIP1Q6ZW49 1069 aaPredicted RBP11.66□□□□□ -0.54
NPM1-202ENST00000351986 V9GY48 417 aaPredicted RBP11.66□□□□□ -0.54
NPM1-202ENST00000351986 TTC13Q8NBP0 860 aa11.65□□□□□ -0.54
NPM1-202ENST00000351986 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.63□□□□□ -0.55
NPM1-202ENST00000351986 RBM27Q9P2N5 1060 aaKnown RBP11.63□□□□□ -0.55
NPM1-202ENST00000351986 PDZRN3Q9UPQ7 1066 aa11.62□□□□□ -0.55
NPM1-202ENST00000351986 EYA1Q99502 592 aa11.59□□□□□ -0.55
NPM1-202ENST00000351986 SLF2Q8IX21 1173 aa11.58□□□□□ -0.56
NPM1-202ENST00000351986 ZPR1O75312 459 aa11.57□□□□□ -0.56
NPM1-202ENST00000351986 MLLT3P42568 568 aaPredicted RBP11.56□□□□□ -0.56
NPM1-202ENST00000351986 ZNF787Q6DD87 383 aa11.55□□□□□ -0.56
NPM1-202ENST00000351986 EMID1Q96A84 441 aaPredicted RBP11.55□□□□□ -0.56
NPM1-202ENST00000351986 BLOC1S3Q6QNY0 202 aa11.54□□□□□ -0.56
NPM1-202ENST00000351986 TLL1O43897 1013 aa11.53□□□□□ -0.56
NPM1-202ENST00000351986 GGCXP38435 758 aa11.53□□□□□ -0.56
NPM1-202ENST00000351986 PCDHB3Q9Y5E6 796 aa11.53□□□□□ -0.56
NPM1-202ENST00000351986 TRIM67Q6ZTA4 783 aa11.52□□□□□ -0.57
NPM1-202ENST00000351986 RNF223E7ERA6 249 aa11.51□□□□□ -0.57
NPM1-202ENST00000351986 FAM161AQ3B820 660 aa11.51□□□□□ -0.57
NPM1-202ENST00000351986 CCDC180Q9P1Z9 1646 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms