RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 TPM4P67936 248 aa14.55□□□□□ -0.08
CDK5RAP2-201ENST00000349780 U2SURPO15042 1029 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP2-201ENST00000349780 RGL3Q3MIN7 710 aa14.54□□□□□ -0.08
CDK5RAP2-201ENST00000349780 IFT57Q9NWB7 429 aa14.54□□□□□ -0.08
CDK5RAP2-201ENST00000349780 E9PSI1 815 aa14.54□□□□□ -0.08
CDK5RAP2-201ENST00000349780 KCNJ4P48050 445 aa14.54□□□□□ -0.08
CDK5RAP2-201ENST00000349780 CHMP4AQ9BY43 222 aa14.54□□□□□ -0.08
CDK5RAP2-201ENST00000349780 ARGLU1Q9NWB6 273 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP2-201ENST00000349780 NOL8Q76FK4 1167 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP2-201ENST00000349780 TSPYL1Q9H0U9 437 aa14.53□□□□□ -0.08
CDK5RAP2-201ENST00000349780 CCAR2Q8N163 923 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP2-201ENST00000349780 AKNAQ7Z591 1439 aa14.52□□□□□ -0.08
CDK5RAP2-201ENST00000349780 PLCD3Q8N3E9 789 aa14.52□□□□□ -0.08
CDK5RAP2-201ENST00000349780 PDCL2Q8N4E4 241 aa14.52□□□□□ -0.08
CDK5RAP2-201ENST00000349780 SOGA1O94964 1423 aa14.52□□□□□ -0.09
CDK5RAP2-201ENST00000349780 CENPJQ9HC77 1338 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP2-201ENST00000349780 PATL2C9JE40 543 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP2-201ENST00000349780 IRX3P78415 501 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP2-201ENST00000349780 RNF214Q8ND24 703 aa14.52□□□□□ -0.09
CDK5RAP2-201ENST00000349780 NAP1L2Q9ULW6 460 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP2-201ENST00000349780 FGD1P98174 961 aa14.51□□□□□ -0.09
CDK5RAP2-201ENST00000349780 WASHC2AQ641Q2 1341 aa14.51□□□□□ -0.09
CDK5RAP2-201ENST00000349780 FOXD4L6Q3SYB3 417 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP2-201ENST00000349780 CAVIN1Q6NZI2 390 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP2-201ENST00000349780 FOXD4L3Q6VB84 417 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP2-201ENST00000349780 C22orf23Q9BZE7 217 aa14.51□□□□□ -0.09
CDK5RAP2-201ENST00000349780 SASS6Q6UVJ0 657 aa14.51□□□□□ -0.09
CDK5RAP2-201ENST00000349780 PAXIP1Q6ZW49 1069 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP2-201ENST00000349780 NLRP13Q86W25 1043 aa14.51□□□□□ -0.09
CDK5RAP2-201ENST00000349780 CLUAP1Q96AJ1 413 aa14.51□□□□□ -0.09
CDK5RAP2-201ENST00000349780 MCM4P33991 863 aa14.5□□□□□ -0.09
CDK5RAP2-201ENST00000349780 MYBBP1AQ9BQG0 1328 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP2-201ENST00000349780 TAOK2Q9UL54 1235 aa14.5□□□□□ -0.09
CDK5RAP2-201ENST00000349780 TSPY4P0CV99 314 aa14.49□□□□□ -0.09
CDK5RAP2-201ENST00000349780 TSPY10P0CW01 314 aa14.49□□□□□ -0.09
CDK5RAP2-201ENST00000349780 KIF3AQ9Y496 699 aa14.49□□□□□ -0.09
CDK5RAP2-201ENST00000349780 APBB1O00213 710 aa14.49□□□□□ -0.09
CDK5RAP2-201ENST00000349780 IPO8O15397 1037 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP2-201ENST00000349780 TMF1P82094 1093 aa14.48□□□□□ -0.09
CDK5RAP2-201ENST00000349780 NUCB2P80303 420 aa14.48□□□□□ -0.09
CDK5RAP2-201ENST00000349780 PHLDB1Q86UU1 1377 aa14.48□□□□□ -0.09
CDK5RAP2-201ENST00000349780 GOLGA6L19H0YKK7 550 aa14.47□□□□□ -0.09
CDK5RAP2-201ENST00000349780 KIF15Q9NS87 1388 aa14.47□□□□□ -0.09
CDK5RAP2-201ENST00000349780 TPM3P06753 285 aa14.47□□□□□ -0.09
CDK5RAP2-201ENST00000349780 TRHP20396 242 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP2-201ENST00000349780 RDXP35241 583 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP2-201ENST00000349780 DEF6Q9H4E7 631 aa14.46□□□□□ -0.09
CDK5RAP2-201ENST00000349780 CGNL1Q0VF96 1302 aa14.46□□□□□ -0.09
CDK5RAP2-201ENST00000349780 LETM1O95202 739 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP2-201ENST00000349780 CALCOCO1Q9P1Z2 691 aa14.46□□□□□ -0.09
CDK5RAP2-201ENST00000349780 WASHC2CQ9Y4E1 1318 aa14.46□□□□□ -0.09
CDK5RAP2-201ENST00000349780 TPD52L1Q16890 204 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP2-201ENST00000349780 LEKR1Q6ZMV7 388 aa14.45□□□□□ -0.1
CDK5RAP2-201ENST00000349780 DYNC1I1O14576 645 aa14.45□□□□□ -0.1
CDK5RAP2-201ENST00000349780 COG6Q9Y2V7 657 aa14.45□□□□□ -0.1
CDK5RAP2-201ENST00000349780 XPCQ01831 940 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP2-201ENST00000349780 PPP4R3BQ5MIZ7 849 aa14.44□□□□□ -0.1
CDK5RAP2-201ENST00000349780 SMAP1Q8IYB5 467 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP2-201ENST00000349780 DNAJC2Q99543 621 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP2-201ENST00000349780 MNS1Q8NEH6 495 aa14.44□□□□□ -0.1
CDK5RAP2-201ENST00000349780 HOMER1Q86YM7 354 aa14.44□□□□□ -0.1
CDK5RAP2-201ENST00000349780 CCDC146Q8IYE0 955 aa14.44□□□□□ -0.1
CDK5RAP2-201ENST00000349780 TSPY26PQ9H489 355 aa14.44□□□□□ -0.1
CDK5RAP2-201ENST00000349780 TRERF1Q96PN7 1200 aa14.43□□□□□ -0.1
CDK5RAP2-201ENST00000349780 ROCK2O75116 1388 aaKnown RBP14.43□□□□□ -0.1
CDK5RAP2-201ENST00000349780 FOXD1Q16676 465 aa14.43□□□□□ -0.1
CDK5RAP2-201ENST00000349780 PLEKHD1A6NEE1 506 aa14.42□□□□□ -0.1
CDK5RAP2-201ENST00000349780 GPATCH11Q8N954 259 aa14.42□□□□□ -0.1
CDK5RAP2-201ENST00000349780 AK7Q96M32 723 aa14.42□□□□□ -0.1
CDK5RAP2-201ENST00000349780 CNTLNQ9NXG0 1405 aa14.42□□□□□ -0.1
CDK5RAP2-201ENST00000349780 GTPBP4Q9BZE4 634 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP2-201ENST00000349780 SMG6Q86US8 1419 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP2-201ENST00000349780 BECN2A8MW95 431 aa14.41□□□□□ -0.1
CDK5RAP2-201ENST00000349780 SMC4Q9NTJ3 1288 aa14.41□□□□□ -0.1
CDK5RAP2-201ENST00000349780 DCAF11Q8TEB1 546 aa14.41□□□□□ -0.1
CDK5RAP2-201ENST00000349780 RRAGDQ9NQL2 400 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP2-201ENST00000349780 H0YHG0 523 aa14.41□□□□□ -0.1
CDK5RAP2-201ENST00000349780 L3MBTL2Q969R5 705 aa14.4□□□□□ -0.1
CDK5RAP2-201ENST00000349780 SPDYE4A6NLX3 237 aa14.4□□□□□ -0.1
CDK5RAP2-201ENST00000349780 ATP6V1DQ9Y5K8 247 aa14.4□□□□□ -0.1
CDK5RAP2-201ENST00000349780 MPNDQ8N594 471 aa14.4□□□□□ -0.1
CDK5RAP2-201ENST00000349780 TIGD1Q96MW7 591 aa14.4□□□□□ -0.1
CDK5RAP2-201ENST00000349780 OS9Q13438 667 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP2-201ENST00000349780 HSP90B2PQ58FF3 399 aa14.39□□□□□ -0.11
CDK5RAP2-201ENST00000349780 NPHP1O15259 732 aa14.39□□□□□ -0.11
CDK5RAP2-201ENST00000349780 PRPF40AO75400 957 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP2-201ENST00000349780 HSP90AB3PQ58FF7 597 aa14.38□□□□□ -0.11
CDK5RAP2-201ENST00000349780 CCDC112Q8NEF3 446 aa14.38□□□□□ -0.11
CDK5RAP2-201ENST00000349780 ACBD3Q9H3P7 528 aa14.38□□□□□ -0.11
CDK5RAP2-201ENST00000349780 ARHGAP35Q9NRY4 1499 aa14.37□□□□□ -0.11
CDK5RAP2-201ENST00000349780 XRCC6P12956 609 aaKnown RBP eCLIP14.37□□□□□ -0.116e-6■■■■■ 27.6
CDK5RAP2-201ENST00000349780 VGLL3A8MV65 326 aa14.37□□□□□ -0.11
CDK5RAP2-201ENST00000349780 HSP90B1P14625 803 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP2-201ENST00000349780 HAP1P54257 671 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP2-201ENST00000349780 ANKRD45Q5TZF3 282 aa14.36□□□□□ -0.11
CDK5RAP2-201ENST00000349780 CCDC94Q9BW85 323 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP2-201ENST00000349780 MBD3O95983 291 aa14.35□□□□□ -0.11
CDK5RAP2-201ENST00000349780 GTF2A1P52655 376 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP2-201ENST00000349780 NBPF1Q3BBV0 1214 aa14.35□□□□□ -0.11
CDK5RAP2-201ENST00000349780 C14orf37Q86TY3 774 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms