RNA–Protein interactions for RNA: ENST00000349258.8

THSD1-202, Transcript of thrombospondin type 1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene THSD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-202ENST00000349258 FAM135AQ9P2D6 1515 aa23.02■■□□□ 1.28
THSD1-202ENST00000349258 ROCK2O75116 1388 aaKnown RBP23.01■■□□□ 1.27
THSD1-202ENST00000349258 SPATA31E1Q6ZUB1 1445 aa23■■□□□ 1.27
THSD1-202ENST00000349258 KIF3BO15066 747 aa22.99■■□□□ 1.27
THSD1-202ENST00000349258 MYO5CQ9NQX4 1742 aa22.99■■□□□ 1.27
THSD1-202ENST00000349258 IRX6P78412 446 aaPredicted RBP22.98■■□□□ 1.27
THSD1-202ENST00000349258 NEFLP07196 543 aa22.97■■□□□ 1.27
THSD1-202ENST00000349258 SCAPERQ9BY12 1400 aa22.94■■□□□ 1.26
THSD1-202ENST00000349258 UHRF1BP1LA0JNW5 1464 aa22.9■■□□□ 1.26
THSD1-202ENST00000349258 WDR7Q9Y4E6 1490 aa22.9■■□□□ 1.26
THSD1-202ENST00000349258 FANCAO15360 1455 aa22.89■■□□□ 1.26
THSD1-202ENST00000349258 PLA2R1Q13018 1463 aa22.89■■□□□ 1.25
THSD1-202ENST00000349258 ASXL2Q76L83 1435 aa22.89■■□□□ 1.25
THSD1-202ENST00000349258 SENP3Q9H4L4 574 aaPredicted RBP22.88■■□□□ 1.25
THSD1-202ENST00000349258 CHGAP10645 457 aaKnown RBP22.87■■□□□ 1.25
THSD1-202ENST00000349258 KDM5DQ9BY66 1539 aa22.85■■□□□ 1.25
THSD1-202ENST00000349258 GGT6Q6P531 493 aa22.85■■□□□ 1.25
THSD1-202ENST00000349258 DUOX2Q9NRD8 1548 aa22.84■■□□□ 1.25
THSD1-202ENST00000349258 MYT1Q01538 1121 aa22.84■■□□□ 1.25
THSD1-202ENST00000349258 BCORL1Q5H9F3 1711 aa22.83■■□□□ 1.25
THSD1-202ENST00000349258 ABCC1P33527 1531 aa22.83■■□□□ 1.25
THSD1-202ENST00000349258 CYB5RLQ6IPT4 315 aa22.83■■□□□ 1.24
THSD1-202ENST00000349258 ADGRL1O94910 1474 aa22.82■■□□□ 1.24
THSD1-202ENST00000349258 RALGAPBQ86X10 1494 aa22.82■■□□□ 1.24
THSD1-202ENST00000349258 TMC1Q8TDI8 760 aa22.81■■□□□ 1.24
THSD1-202ENST00000349258 UHRF1BP1Q6BDS2 1440 aa22.81■■□□□ 1.24
THSD1-202ENST00000349258 SALL2Q9Y467 1007 aaPredicted RBP22.8■■□□□ 1.24
THSD1-202ENST00000349258 ERBINQ96RT1 1412 aa22.78■■□□□ 1.24
THSD1-202ENST00000349258 A2MP01023 1474 aa22.78■■□□□ 1.24
THSD1-202ENST00000349258 RAPGEF3O95398 923 aa22.78■■□□□ 1.24
THSD1-202ENST00000349258 PRAG1Q86YV5 1406 aa22.78■■□□□ 1.24
THSD1-202ENST00000349258 CC2D1BQ5T0F9 858 aaKnown RBP22.77■■□□□ 1.24
THSD1-202ENST00000349258 KDM5CP41229 1560 aa22.77■■□□□ 1.24
THSD1-202ENST00000349258 DHX29Q7Z478 1369 aaKnown RBP22.77■■□□□ 1.24
THSD1-202ENST00000349258 MAST1Q9Y2H9 1570 aa22.77■■□□□ 1.23
THSD1-202ENST00000349258 KANK1Q14678 1352 aa22.75■■□□□ 1.23
THSD1-202ENST00000349258 PLXNC1O60486 1568 aa22.74■■□□□ 1.23
THSD1-202ENST00000349258 UNC13BO14795 1591 aa22.72■■□□□ 1.23
THSD1-202ENST00000349258 CD109Q6YHK3 1445 aa22.7■■□□□ 1.23
THSD1-202ENST00000349258 ZFYVE16Q7Z3T8 1539 aa22.69■■□□□ 1.22
THSD1-202ENST00000349258 NUTM2DQ5VT03 806 aaPredicted RBP22.69■■□□□ 1.22
THSD1-202ENST00000349258 DISP3Q9P2K9 1392 aa22.68■■□□□ 1.22
THSD1-202ENST00000349258 PANK3Q9H999 370 aa22.68■■□□□ 1.22
THSD1-202ENST00000349258 IQGAP3Q86VI3 1631 aa22.68■■□□□ 1.22
THSD1-202ENST00000349258 ATP7AQ04656 1500 aa22.67■■□□□ 1.22
THSD1-202ENST00000349258 TMF1P82094 1093 aa22.66■■□□□ 1.22
THSD1-202ENST00000349258 TESK2Q96S53 571 aa22.66■■□□□ 1.22
THSD1-202ENST00000349258 ARID4BQ4LE39 1312 aaPredicted RBP22.66■■□□□ 1.22
THSD1-202ENST00000349258 RTEL1-TNFRSF6BF6WH68 1400 aa22.65■■□□□ 1.22
THSD1-202ENST00000349258 CFAP70Q5T0N1 1121 aa22.64■■□□□ 1.22
THSD1-202ENST00000349258 ATP10AO60312 1499 aa22.62■■□□□ 1.21
THSD1-202ENST00000349258 WASHC2CQ9Y4E1 1318 aa22.61■■□□□ 1.21
THSD1-202ENST00000349258 UGGT1Q9NYU2 1555 aa22.61■■□□□ 1.21
THSD1-202ENST00000349258 CFAP65Q6ZU64 1925 aaKnown RBP22.6■■□□□ 1.21
THSD1-202ENST00000349258 ZBED9Q6R2W3 1325 aa22.59■■□□□ 1.21
THSD1-202ENST00000349258 PNISRQ8TF01 805 aaKnown RBP22.59■■□□□ 1.21
THSD1-202ENST00000349258 ABCA9Q8IUA7 1624 aa22.59■■□□□ 1.21
THSD1-202ENST00000349258 ADGRF5Q8IZF2 1346 aa22.59■■□□□ 1.21
THSD1-202ENST00000349258 MAGI2Q86UL8 1455 aa22.58■■□□□ 1.21
THSD1-202ENST00000349258 E9PCH4 1651 aa22.57■■□□□ 1.2
THSD1-202ENST00000349258 MYBBP1AQ9BQG0 1328 aaKnown RBP22.57■■□□□ 1.2
THSD1-202ENST00000349258 TRPM1Q7Z4N2 1603 aa22.57■■□□□ 1.2
THSD1-202ENST00000349258 KTN1Q86UP2 1357 aaKnown RBP22.56■■□□□ 1.2
THSD1-202ENST00000349258 TSHZ2Q9NRE2 1034 aa22.55■■□□□ 1.2
THSD1-202ENST00000349258 RALBP1Q15311 655 aa22.54■■□□□ 1.2
THSD1-202ENST00000349258 ARAP3Q8WWN8 1544 aa22.54■■□□□ 1.2
THSD1-202ENST00000349258 POLR1AO95602 1720 aaPredicted RBP22.54■■□□□ 1.2
THSD1-202ENST00000349258 ZNF518AQ6AHZ1 1483 aa22.54■■□□□ 1.2
THSD1-202ENST00000349258 GPRASP1Q5JY77 1395 aa22.53■■□□□ 1.2
THSD1-202ENST00000349258 PER1O15534 1290 aaPredicted RBP22.52■■□□□ 1.2
THSD1-202ENST00000349258 FAM69CQ0P6D2 419 aa22.52■■□□□ 1.2
THSD1-202ENST00000349258 TMEM132EQ6IEE7 984 aa22.52■■□□□ 1.2
THSD1-202ENST00000349258 TRAK1Q9UPV9 953 aa22.51■■□□□ 1.19
THSD1-202ENST00000349258 KNSTRNQ9Y448 316 aa22.51■■□□□ 1.19
THSD1-202ENST00000349258 NLRP13Q86W25 1043 aa22.49■■□□□ 1.19
THSD1-202ENST00000349258 INO80Q9ULG1 1556 aaPredicted RBP22.49■■□□□ 1.19
THSD1-202ENST00000349258 CLTCL1P53675 1640 aa22.49■■□□□ 1.19
THSD1-202ENST00000349258 B4GALNT3Q6L9W6 998 aa22.48■■□□□ 1.19
THSD1-202ENST00000349258 SAFB2Q14151 953 aaKnown RBP eCLIP22.47■■□□□ 1.19
THSD1-202ENST00000349258 BCL11AQ9H165 835 aa22.47■■□□□ 1.19
THSD1-202ENST00000349258 PTPRTO14522 1441 aa22.46■■□□□ 1.19
THSD1-202ENST00000349258 TRPM2O94759 1503 aa22.46■■□□□ 1.19
THSD1-202ENST00000349258 POGZQ7Z3K3 1410 aa22.46■■□□□ 1.19
THSD1-202ENST00000349258 MLECQ14165 292 aa22.46■■□□□ 1.19
THSD1-202ENST00000349258 COL17A1Q9UMD9 1497 aaPredicted RBP22.45■■□□□ 1.18
THSD1-202ENST00000349258 KIDINS220Q9ULH0 1771 aa22.45■■□□□ 1.18
THSD1-202ENST00000349258 PRDM15P57071 1507 aaPredicted RBP22.43■■□□□ 1.18
THSD1-202ENST00000349258 BRD4O60885 1362 aaPredicted RBP22.42■■□□□ 1.18
THSD1-202ENST00000349258 SPHKAPQ2M3C7 1700 aa22.42■■□□□ 1.18
THSD1-202ENST00000349258 NOS1P29475 1434 aa22.41■■□□□ 1.18
THSD1-202ENST00000349258 NUDCQ9Y266 331 aa22.41■■□□□ 1.18
THSD1-202ENST00000349258 TET3O43151 1660 aa22.4■■□□□ 1.18
THSD1-202ENST00000349258 TNNT2P45379 298 aaPredicted RBP22.4■■□□□ 1.18
THSD1-202ENST00000349258 EIF2AK4Q9P2K8 1649 aaKnown RBP22.4■■□□□ 1.18
THSD1-202ENST00000349258 NPATQ14207 1427 aa22.39■■□□□ 1.18
THSD1-202ENST00000349258 STK26Q9P289 416 aa22.39■■□□□ 1.18
THSD1-202ENST00000349258 CDCA8Q53HL2 280 aa22.38■■□□□ 1.17
THSD1-202ENST00000349258 SCAF11Q99590 1463 aaKnown RBP22.38■■□□□ 1.17
THSD1-202ENST00000349258 PARD3Q8TEW0 1356 aa22.38■■□□□ 1.17
THSD1-202ENST00000349258 CDCA7LQ96GN5 454 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms