RNA–Protein interactions for RNA: ENST00000347077.8

ZNF546-201, Transcript of zinc finger protein 546, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF546, Length 7,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-201ENST00000347077 U2SURPO15042 1029 aaKnown RBP7.42□□□□□ -1.22
ZNF546-201ENST00000347077 FRAT1Q92837 279 aaPredicted RBP7.42□□□□□ -1.22
ZNF546-201ENST00000347077 SRPK2P78362 688 aaKnown RBP7.42□□□□□ -1.22
ZNF546-201ENST00000347077 LETM1O95202 739 aaPredicted RBP7.42□□□□□ -1.22
ZNF546-201ENST00000347077 MCM2P49736 904 aa7.42□□□□□ -1.22
ZNF546-201ENST00000347077 PLCB2Q00722 1185 aa7.42□□□□□ -1.22
ZNF546-201ENST00000347077 RNF20Q5VTR2 975 aa7.42□□□□□ -1.22
ZNF546-201ENST00000347077 DCAF11Q8TEB1 546 aa7.42□□□□□ -1.22
ZNF546-201ENST00000347077 NAP1L2Q9ULW6 460 aaPredicted RBP7.42□□□□□ -1.22
ZNF546-201ENST00000347077 GOLGA6L19H0YKK7 550 aa7.41□□□□□ -1.22
ZNF546-201ENST00000347077 CNTLNQ9NXG0 1405 aa7.41□□□□□ -1.22
ZNF546-201ENST00000347077 E9PSI1 815 aa7.41□□□□□ -1.22
ZNF546-201ENST00000347077 RGL3Q3MIN7 710 aa7.41□□□□□ -1.22
ZNF546-201ENST00000347077 CAGE1Q8TC20 777 aa7.41□□□□□ -1.22
ZNF546-201ENST00000347077 ZBED9Q6R2W3 1325 aa7.41□□□□□ -1.22
ZNF546-201ENST00000347077 CCDC144AA2RUR9 1427 aa7.41□□□□□ -1.22
ZNF546-201ENST00000347077 ERICH3Q5RHP9 1530 aa7.41□□□□□ -1.22
ZNF546-201ENST00000347077 MYBBP1AQ9BQG0 1328 aaKnown RBP7.4□□□□□ -1.22
ZNF546-201ENST00000347077 RGS3P49796 1198 aa7.4□□□□□ -1.22
ZNF546-201ENST00000347077 NUCB2P80303 420 aa7.4□□□□□ -1.22
ZNF546-201ENST00000347077 PKNOX2Q96KN3 472 aa7.4□□□□□ -1.22
ZNF546-201ENST00000347077 CENPJQ9HC77 1338 aaPredicted RBP7.4□□□□□ -1.22
ZNF546-201ENST00000347077 ARGLU1Q9NWB6 273 aaPredicted RBP7.4□□□□□ -1.22
ZNF546-201ENST00000347077 PLEKHH2Q8IVE3 1493 aa7.4□□□□□ -1.22
ZNF546-201ENST00000347077 EFCAB5A4FU69 1503 aa7.4□□□□□ -1.23
ZNF546-201ENST00000347077 ERCC4Q92889 916 aaPredicted RBP7.4□□□□□ -1.23
ZNF546-201ENST00000347077 GORABQ5T7V8 394 aa7.4□□□□□ -1.23
ZNF546-201ENST00000347077 SOGA1O94964 1423 aa7.4□□□□□ -1.23
ZNF546-201ENST00000347077 MFAP1P55081 439 aaKnown RBP7.39□□□□□ -1.23
ZNF546-201ENST00000347077 DCTN1Q14203 1278 aa7.39□□□□□ -1.23
ZNF546-201ENST00000347077 PIP4K2AP48426 406 aaPredicted RBP7.39□□□□□ -1.23
ZNF546-201ENST00000347077 KCNH8Q96L42 1107 aa7.39□□□□□ -1.23
ZNF546-201ENST00000347077 CT47B1P0C2W7 299 aaPredicted RBP7.39□□□□□ -1.23
ZNF546-201ENST00000347077 SYNE3Q6ZMZ3 975 aa7.39□□□□□ -1.23
ZNF546-201ENST00000347077 NAT10Q9H0A0 1025 aaKnown RBP7.39□□□□□ -1.23
ZNF546-201ENST00000347077 NUP155O75694 1391 aa7.39□□□□□ -1.23
ZNF546-201ENST00000347077 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.39□□□□□ -1.23
ZNF546-201ENST00000347077 AKAP17AQ02040 695 aaKnown RBP7.38□□□□□ -1.23
ZNF546-201ENST00000347077 MYOM3Q5VTT5 1437 aa7.38□□□□□ -1.23
ZNF546-201ENST00000347077 HMGB1P09429 215 aaKnown RBP7.38□□□□□ -1.23
ZNF546-201ENST00000347077 ZKSCAN1P17029 563 aaPredicted RBP7.38□□□□□ -1.23
ZNF546-201ENST00000347077 ARXQ96QS3 562 aa7.38□□□□□ -1.23
ZNF546-201ENST00000347077 VGFO15240 615 aaPredicted RBP7.38□□□□□ -1.23
ZNF546-201ENST00000347077 DIAPH3Q9NSV4 1193 aa7.38□□□□□ -1.23
ZNF546-201ENST00000347077 CWC15Q9P013 229 aaKnown RBP7.38□□□□□ -1.23
ZNF546-201ENST00000347077 EVC2Q86UK5 1308 aa7.38□□□□□ -1.23
ZNF546-201ENST00000347077 DDX19BQ9UMR2 479 aa7.38□□□□□ -1.23
ZNF546-201ENST00000347077 PDCP20941 246 aa7.38□□□□□ -1.23
ZNF546-201ENST00000347077 CCDC88BA6NC98 1476 aa7.37□□□□□ -1.23
ZNF546-201ENST00000347077 RRBP1Q9P2E9 1410 aaKnown RBP7.37□□□□□ -1.23
ZNF546-201ENST00000347077 FAM161AQ3B820 660 aa7.37□□□□□ -1.23
ZNF546-201ENST00000347077 HIP1O00291 1037 aa7.37□□□□□ -1.23
ZNF546-201ENST00000347077 SF3A1Q15459 793 aaKnown RBP7.37□□□□□ -1.23
ZNF546-201ENST00000347077 FANCIQ9NVI1 1328 aa7.37□□□□□ -1.23
ZNF546-201ENST00000347077 DDX58O95786 925 aaKnown RBP7.37□□□□□ -1.23
ZNF546-201ENST00000347077 NEXNQ0ZGT2 675 aa7.37□□□□□ -1.23
ZNF546-201ENST00000347077 TAF7LQ5H9L4 462 aa7.37□□□□□ -1.23
ZNF546-201ENST00000347077 AK7Q96M32 723 aa7.37□□□□□ -1.23
ZNF546-201ENST00000347077 CCDC173Q0VFZ6 552 aa7.37□□□□□ -1.23
ZNF546-201ENST00000347077 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.37□□□□□ -1.23
ZNF546-201ENST00000347077 API5Q9BZZ5 524 aaKnown RBP7.37□□□□□ -1.23
ZNF546-201ENST00000347077 NOL10Q9BSC4 688 aaKnown RBP7.37□□□□□ -1.23
ZNF546-201ENST00000347077 LUC7LQ9NQ29 371 aaKnown RBP7.37□□□□□ -1.23
ZNF546-201ENST00000347077 RAB3GAP2Q9H2M9 1393 aa7.36□□□□□ -1.23
ZNF546-201ENST00000347077 HMGN5P82970 282 aaKnown RBP7.36□□□□□ -1.23
ZNF546-201ENST00000347077 MPHOSPH9Q99550 1183 aa7.36□□□□□ -1.23
ZNF546-201ENST00000347077 A0A0G2JS52 829 aa7.36□□□□□ -1.23
ZNF546-201ENST00000347077 ZNF428Q96B54 188 aa7.36□□□□□ -1.23
ZNF546-201ENST00000347077 TRIM29Q14134 588 aa7.36□□□□□ -1.23
ZNF546-201ENST00000347077 BECN2A8MW95 431 aa7.35□□□□□ -1.23
ZNF546-201ENST00000347077 U2AF1L5P0DN76 240 aaPredicted RBP7.35□□□□□ -1.23
ZNF546-201ENST00000347077 DEKP35659 375 aaKnown RBP7.35□□□□□ -1.23
ZNF546-201ENST00000347077 U2AF1Q01081 240 aaKnown RBP eCLIP7.35□□□□□ -1.23
ZNF546-201ENST00000347077 TPD52L1Q16890 204 aaPredicted RBP7.35□□□□□ -1.23
ZNF546-201ENST00000347077 ZRSR2Q15696 482 aaKnown RBP7.35□□□□□ -1.23
ZNF546-201ENST00000347077 SUPT6HQ7KZ85 1726 aaKnown RBP7.35□□□□□ -1.23
ZNF546-201ENST00000347077 XBP1P17861 261 aa7.35□□□□□ -1.23
ZNF546-201ENST00000347077 MBD3O95983 291 aa7.35□□□□□ -1.23
ZNF546-201ENST00000347077 ITPRIPQ8IWB1 547 aa7.35□□□□□ -1.23
ZNF546-201ENST00000347077 PKD2Q13563 968 aa7.34□□□□□ -1.23
ZNF546-201ENST00000347077 RBM19Q9Y4C8 960 aaKnown RBP7.34□□□□□ -1.23
ZNF546-201ENST00000347077 DAPK1P53355 1430 aa7.34□□□□□ -1.23
ZNF546-201ENST00000347077 FYCO1Q9BQS8 1478 aa7.34□□□□□ -1.23
ZNF546-201ENST00000347077 H3BQV1 296 aa7.34□□□□□ -1.23
ZNF546-201ENST00000347077 ERC2O15083 957 aa7.34□□□□□ -1.23
ZNF546-201ENST00000347077 IFFO2Q5TF58 517 aa7.34□□□□□ -1.23
ZNF546-201ENST00000347077 FAM184AQ8NB25 1140 aa7.34□□□□□ -1.23
ZNF546-201ENST00000347077 PRKCSHP14314 528 aaPredicted RBP7.34□□□□□ -1.23
ZNF546-201ENST00000347077 CADPSQ9ULU8 1353 aa7.34□□□□□ -1.23
ZNF546-201ENST00000347077 ZKSCAN2Q63HK3 967 aa7.34□□□□□ -1.23
ZNF546-201ENST00000347077 RASSF8Q8NHQ8 419 aa7.34□□□□□ -1.23
ZNF546-201ENST00000347077 CCDC66A2RUB6 948 aa7.33□□□□□ -1.24
ZNF546-201ENST00000347077 HSP90AA2PQ14568 343 aaPredicted RBP7.33□□□□□ -1.24
ZNF546-201ENST00000347077 TAF3Q5VWG9 929 aa7.33□□□□□ -1.24
ZNF546-201ENST00000347077 TRDNQ13061 729 aa7.33□□□□□ -1.24
ZNF546-201ENST00000347077 SAFBQ15424 915 aaKnown RBP eCLIP7.33□□□□□ -1.24
ZNF546-201ENST00000347077 PRDM2Q13029 1718 aa7.33□□□□□ -1.24
ZNF546-201ENST00000347077 RRP12Q5JTH9 1297 aaKnown RBP7.33□□□□□ -1.24
ZNF546-201ENST00000347077 HFM1A2PYH4 1435 aa7.33□□□□□ -1.24
ZNF546-201ENST00000347077 CC2D1BQ5T0F9 858 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms