RNA–Protein interactions for RNA: ENST00000346085.9

ARID1B-202, Transcript of AT-rich interaction domain 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARID1B, Length 10,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-202ENST00000346085 CAVIN1Q6NZI2 390 aaKnown RBP21.37■■□□□ 1.01
ARID1B-202ENST00000346085 FAM107BQ9H098 131 aa21.37■■□□□ 1.01
ARID1B-202ENST00000346085 RCAN3Q9UKA8 241 aa21.37■■□□□ 1.01
ARID1B-202ENST00000346085 BBXQ8WY36 941 aaPredicted RBP21.35■■□□□ 1.01
ARID1B-202ENST00000346085 FBXO3Q9UK99 471 aa21.35■■□□□ 1.01
ARID1B-202ENST00000346085 RBM10P98175 930 aaKnown RBP21.35■■□□□ 1.01
ARID1B-202ENST00000346085 PDIA4P13667 645 aaKnown RBP21.34■■□□□ 1.01
ARID1B-202ENST00000346085 DNAJC2Q99543 621 aaKnown RBP21.34■■□□□ 1.01
ARID1B-202ENST00000346085 SPATA24Q86W54 205 aa21.34■■□□□ 1.01
ARID1B-202ENST00000346085 NEUROD2Q15784 382 aa21.33■■□□□ 1.01
ARID1B-202ENST00000346085 H3BQV1 296 aa21.33■■□□□ 1.01
ARID1B-202ENST00000346085 IFFO2Q5TF58 517 aa21.33■■□□□ 1.01
ARID1B-202ENST00000346085 PDCL2Q8N4E4 241 aa21.33■■□□□ 1.01
ARID1B-202ENST00000346085 FAM161AQ3B820 660 aa21.31■■□□□ 1
ARID1B-202ENST00000346085 HOMEZQ8IX15 550 aa21.31■■□□□ 1
ARID1B-202ENST00000346085 UQCRHLA0A096LP55 91 aa21.3■■□□□ 1
ARID1B-202ENST00000346085 UQCRHP07919 91 aa21.3■■□□□ 1
ARID1B-202ENST00000346085 SETSIPP0DME0 302 aa21.3■■□□□ 1
ARID1B-202ENST00000346085 NAT10Q9H0A0 1025 aaKnown RBP21.3■■□□□ 1
ARID1B-202ENST00000346085 ERICH4A6NGS2 130 aa21.3■■□□□ 1
ARID1B-202ENST00000346085 CLGNO14967 610 aa21.29■■□□□ 1
ARID1B-202ENST00000346085 DHX8Q14562 1220 aaKnown RBP21.29■■□□□ 1
ARID1B-202ENST00000346085 FOXD4L1Q9NU39 408 aa21.28■■□□□ 1
ARID1B-202ENST00000346085 CENPHQ9H3R5 247 aa21.28■■□□□ 1
ARID1B-202ENST00000346085 A0A0G2JS52 829 aa21.28■■□□□ 1
ARID1B-202ENST00000346085 BCCIPQ9P287 314 aaKnown RBP eCLIP21.28■■□□□ 12e-8■■■■■ 27
ARID1B-202ENST00000346085 PLPPR3Q6T4P5 718 aa21.27■■□□□ 1
ARID1B-202ENST00000346085 ERLIN1O75477 346 aa21.27■□□□□ 0.99
ARID1B-202ENST00000346085 RNF20Q5VTR2 975 aa21.26■□□□□ 0.99
ARID1B-202ENST00000346085 ISY1Q9ULR0 285 aaKnown RBP21.26■□□□□ 0.99
ARID1B-202ENST00000346085 ZMYND15Q9H091 742 aa21.26■□□□□ 0.99
ARID1B-202ENST00000346085 GTF2A1P52655 376 aaPredicted RBP21.26■□□□□ 0.99
ARID1B-202ENST00000346085 SENP3-EIF4A1A0A087X0R7 540 aa21.26■□□□□ 0.99
ARID1B-202ENST00000346085 PDCL3Q9H2J4 239 aa21.26■□□□□ 0.99
ARID1B-202ENST00000346085 TMCO5BA8MYB1 307 aa21.25■□□□□ 0.99
ARID1B-202ENST00000346085 ERLIN2O94905 339 aa21.24■□□□□ 0.99
ARID1B-202ENST00000346085 PCMTD1Q96MG8 357 aaPredicted RBP21.24■□□□□ 0.99
ARID1B-202ENST00000346085 RBM25P49756 843 aaKnown RBP21.24■□□□□ 0.99
ARID1B-202ENST00000346085 CGNQ9P2M7 1197 aaKnown RBP21.24■□□□□ 0.99
ARID1B-202ENST00000346085 EZRP15311 586 aaKnown RBP21.23■□□□□ 0.99
ARID1B-202ENST00000346085 IPO4Q8TEX9 1081 aaKnown RBP21.23■□□□□ 0.99
ARID1B-202ENST00000346085 RABEP1Q15276 862 aa21.23■□□□□ 0.99
ARID1B-202ENST00000346085 SASS6Q6UVJ0 657 aa21.23■□□□□ 0.99
ARID1B-202ENST00000346085 BRPF3Q9ULD4 1205 aa21.22■□□□□ 0.99
ARID1B-202ENST00000346085 PAIP2Q9BPZ3 127 aaKnown RBP21.22■□□□□ 0.99
ARID1B-202ENST00000346085 ANKRD18AQ8IVF6 992 aa21.22■□□□□ 0.99
ARID1B-202ENST00000346085 ITPRIPQ8IWB1 547 aa21.22■□□□□ 0.99
ARID1B-202ENST00000346085 CCAR1Q8IX12 1150 aaKnown RBP21.22■□□□□ 0.99
ARID1B-202ENST00000346085 NAP1L1P55209 391 aaKnown RBP21.22■□□□□ 0.99
ARID1B-202ENST00000346085 FOXD4L5Q5VV16 416 aaPredicted RBP21.22■□□□□ 0.99
ARID1B-202ENST00000346085 FOXD4L4Q8WXT5 416 aaPredicted RBP21.22■□□□□ 0.99
ARID1B-202ENST00000346085 CHMP5Q9NZZ3 219 aa21.22■□□□□ 0.99
ARID1B-202ENST00000346085 TRIM6-TRIM34B2RNG4 842 aa21.21■□□□□ 0.99
ARID1B-202ENST00000346085 LETM1O95202 739 aaPredicted RBP21.21■□□□□ 0.99
ARID1B-202ENST00000346085 TICAM2Q86XR7 235 aa21.21■□□□□ 0.99
ARID1B-202ENST00000346085 PDE4AP27815 886 aa21.21■□□□□ 0.99
ARID1B-202ENST00000346085 NF2P35240 595 aa21.21■□□□□ 0.99
ARID1B-202ENST00000346085 GOLGA6L10A0A0M3HER8 536 aa21.2■□□□□ 0.99
ARID1B-202ENST00000346085 IL27Q8NEV9 243 aa21.2■□□□□ 0.98
ARID1B-202ENST00000346085 CENPQQ7L2Z9 268 aaPredicted RBP21.2■□□□□ 0.98
ARID1B-202ENST00000346085 ENOX2Q16206 610 aaKnown RBP21.19■□□□□ 0.98
ARID1B-202ENST00000346085 CCDC9Q9Y3X0 531 aaKnown RBP21.19■□□□□ 0.98
ARID1B-202ENST00000346085 TTLL5Q6EMB2 1281 aa21.19■□□□□ 0.98
ARID1B-202ENST00000346085 SLC26A8Q96RN1 970 aa21.19■□□□□ 0.98
ARID1B-202ENST00000346085 TNNT1P13805 278 aa21.18■□□□□ 0.98
ARID1B-202ENST00000346085 TIGD1Q96MW7 591 aa21.17■□□□□ 0.98
ARID1B-202ENST00000346085 CCDC146Q8IYE0 955 aa21.17■□□□□ 0.98
ARID1B-202ENST00000346085 NPHP1O15259 732 aa21.17■□□□□ 0.98
ARID1B-202ENST00000346085 NUCB2P80303 420 aa21.17■□□□□ 0.98
ARID1B-202ENST00000346085 SKIDA1Q1XH10 827 aa21.17■□□□□ 0.98
ARID1B-202ENST00000346085 CT47A1Q5JQC4 288 aaPredicted RBP21.17■□□□□ 0.98
ARID1B-202ENST00000346085 CPSF2Q9P2I0 782 aaKnown RBP21.17■□□□□ 0.98
ARID1B-202ENST00000346085 SHTN1A0MZ66 631 aa21.16■□□□□ 0.98
ARID1B-202ENST00000346085 IQCEQ6IPM2 695 aa21.16■□□□□ 0.98
ARID1B-202ENST00000346085 CCDC112Q8NEF3 446 aa21.16■□□□□ 0.98
ARID1B-202ENST00000346085 SEPT6Q14141 434 aa21.16■□□□□ 0.98
ARID1B-202ENST00000346085 CFAP57Q96MR6 1250 aa21.16■□□□□ 0.98
ARID1B-202ENST00000346085 LRRCC1Q9C099 1032 aa21.16■□□□□ 0.98
ARID1B-202ENST00000346085 NFKBIBQ15653 356 aa21.16■□□□□ 0.98
ARID1B-202ENST00000346085 FAM184AQ8NB25 1140 aa21.15■□□□□ 0.98
ARID1B-202ENST00000346085 KIAA1328Q86T90 577 aa21.15■□□□□ 0.98
ARID1B-202ENST00000346085 WDR66Q8TBY9 1149 aa21.15■□□□□ 0.98
ARID1B-202ENST00000346085 FBLN2P98095 1184 aa21.15■□□□□ 0.98
ARID1B-202ENST00000346085 E9PSI1 815 aa21.15■□□□□ 0.98
ARID1B-202ENST00000346085 LUZP1Q86V48 1076 aa21.15■□□□□ 0.98
ARID1B-202ENST00000346085 CHMP4AQ9BY43 222 aa21.15■□□□□ 0.98
ARID1B-202ENST00000346085 NOL8Q76FK4 1167 aaKnown RBP21.14■□□□□ 0.98
ARID1B-202ENST00000346085 RBM33Q96EV2 1170 aaKnown RBP21.14■□□□□ 0.98
ARID1B-202ENST00000346085 SEPT7Q16181 437 aaKnown RBP21.14■□□□□ 0.97
ARID1B-202ENST00000346085 CHMP3Q9Y3E7 222 aa21.14■□□□□ 0.97
ARID1B-202ENST00000346085 CGNL1Q0VF96 1302 aa21.14■□□□□ 0.97
ARID1B-202ENST00000346085 CCDC47Q96A33 483 aaKnown RBP21.13■□□□□ 0.97
ARID1B-202ENST00000346085 TDO2P48775 406 aa21.13■□□□□ 0.97
ARID1B-202ENST00000346085 SWAP70Q9UH65 585 aa21.13■□□□□ 0.97
ARID1B-202ENST00000346085 HSP90AB2PQ58FF8 381 aa21.13■□□□□ 0.97
ARID1B-202ENST00000346085 STK31Q9BXU1 1019 aa21.13■□□□□ 0.97
ARID1B-202ENST00000346085 CTR9Q6PD62 1173 aa21.13■□□□□ 0.97
ARID1B-202ENST00000346085 ODF2Q5BJF6 829 aa21.12■□□□□ 0.97
ARID1B-202ENST00000346085 APBB1O00213 710 aa21.12■□□□□ 0.97
ARID1B-202ENST00000346085 MICALCLQ6ZW33 695 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms