RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 PLEKHG5O94827 1062 aa16.74■□□□□ 0.27
TRIO-202ENST00000344204 RDXP35241 583 aaKnown RBP16.74■□□□□ 0.27
TRIO-202ENST00000344204 CGNL1Q0VF96 1302 aa16.74■□□□□ 0.27
TRIO-202ENST00000344204 TSPY4P0CV99 314 aa16.74■□□□□ 0.27
TRIO-202ENST00000344204 TSPY10P0CW01 314 aa16.74■□□□□ 0.27
TRIO-202ENST00000344204 GOLGA2Q08379 1002 aa16.73■□□□□ 0.27
TRIO-202ENST00000344204 PLIN1O60240 522 aa16.73■□□□□ 0.27
TRIO-202ENST00000344204 DEF6Q9H4E7 631 aa16.73■□□□□ 0.27
TRIO-202ENST00000344204 AK7Q96M32 723 aa16.73■□□□□ 0.27
TRIO-202ENST00000344204 ACBD3Q9H3P7 528 aa16.72■□□□□ 0.27
TRIO-202ENST00000344204 MYBBP1AQ9BQG0 1328 aaKnown RBP16.72■□□□□ 0.27
TRIO-202ENST00000344204 BACH2Q9BYV9 841 aa16.72■□□□□ 0.27
TRIO-202ENST00000344204 NUCB2P80303 420 aa16.71■□□□□ 0.27
TRIO-202ENST00000344204 CCDC70Q6NSX1 233 aa16.71■□□□□ 0.27
TRIO-202ENST00000344204 SOGA1O94964 1423 aa16.71■□□□□ 0.27
TRIO-202ENST00000344204 PRKRIP1Q9H875 184 aaPredicted RBP16.7■□□□□ 0.26
TRIO-202ENST00000344204 EIF3AQ14152 1382 aaKnown RBP16.7■□□□□ 0.26
TRIO-202ENST00000344204 U2SURPO15042 1029 aaKnown RBP16.7■□□□□ 0.26
TRIO-202ENST00000344204 HSP90B2PQ58FF3 399 aa16.69■□□□□ 0.26
TRIO-202ENST00000344204 LEKR1Q6ZMV7 388 aa16.69■□□□□ 0.26
TRIO-202ENST00000344204 MCTP1Q6DN14 999 aa16.69■□□□□ 0.26
TRIO-202ENST00000344204 IRX3P78415 501 aaPredicted RBP16.69■□□□□ 0.26
TRIO-202ENST00000344204 RGL3Q3MIN7 710 aa16.69■□□□□ 0.26
TRIO-202ENST00000344204 ZSCAN30Q86W11 494 aa16.69■□□□□ 0.26
TRIO-202ENST00000344204 CNTLNQ9NXG0 1405 aa16.68■□□□□ 0.26
TRIO-202ENST00000344204 C22orf23Q9BZE7 217 aa16.68■□□□□ 0.26
TRIO-202ENST00000344204 CGNQ9P2M7 1197 aaKnown RBP16.68■□□□□ 0.26
TRIO-202ENST00000344204 AEBP1Q8IUX7 1158 aa16.68■□□□□ 0.26
TRIO-202ENST00000344204 AK9Q5TCS8 1911 aa16.68■□□□□ 0.26
TRIO-202ENST00000344204 KIF3AQ9Y496 699 aa16.68■□□□□ 0.26
TRIO-202ENST00000344204 AKNAQ7Z591 1439 aa16.67■□□□□ 0.26
TRIO-202ENST00000344204 MNS1Q8NEH6 495 aa16.67■□□□□ 0.26
TRIO-202ENST00000344204 HOMER1Q86YM7 354 aa16.67■□□□□ 0.26
TRIO-202ENST00000344204 PATL2C9JE40 543 aaKnown RBP16.67■□□□□ 0.26
TRIO-202ENST00000344204 CALCOCO1Q9P1Z2 691 aa16.66■□□□□ 0.26
TRIO-202ENST00000344204 TAOK2Q9UL54 1235 aa16.66■□□□□ 0.26
TRIO-202ENST00000344204 PABPN1Q86U42 306 aaKnown RBP eCLIP16.66■□□□□ 0.26
TRIO-202ENST00000344204 BECN2A8MW95 431 aa16.66■□□□□ 0.26
TRIO-202ENST00000344204 APBB1O00213 710 aa16.66■□□□□ 0.26
TRIO-202ENST00000344204 NOL8Q76FK4 1167 aaKnown RBP16.65■□□□□ 0.26
TRIO-202ENST00000344204 ERICH4A6NGS2 130 aa16.65■□□□□ 0.26
TRIO-202ENST00000344204 CAVIN1Q6NZI2 390 aaKnown RBP16.65■□□□□ 0.26
TRIO-202ENST00000344204 H0YHG0 523 aa16.65■□□□□ 0.26
TRIO-202ENST00000344204 FMN1Q68DA7 1419 aa16.65■□□□□ 0.26
TRIO-202ENST00000344204 PDCL2Q8N4E4 241 aa16.64■□□□□ 0.25
TRIO-202ENST00000344204 TSPY26PQ9H489 355 aa16.64■□□□□ 0.25
TRIO-202ENST00000344204 CCDC34Q96HJ3 373 aa16.64■□□□□ 0.25
TRIO-202ENST00000344204 C11orf95C9JLR9 678 aaPredicted RBP16.63■□□□□ 0.25
TRIO-202ENST00000344204 SASS6Q6UVJ0 657 aa16.63■□□□□ 0.25
TRIO-202ENST00000344204 DYNC1I1O14576 645 aa16.63■□□□□ 0.25
TRIO-202ENST00000344204 MBD3O95983 291 aa16.63■□□□□ 0.25
TRIO-202ENST00000344204 SMC4Q9NTJ3 1288 aa16.62■□□□□ 0.25
TRIO-202ENST00000344204 USP8P40818 1118 aa16.62■□□□□ 0.25
TRIO-202ENST00000344204 SMG6Q86US8 1419 aaKnown RBP16.62■□□□□ 0.25
TRIO-202ENST00000344204 POGKQ9P215 609 aa16.62■□□□□ 0.25
TRIO-202ENST00000344204 TPD52L1Q16890 204 aaPredicted RBP16.62■□□□□ 0.25
TRIO-202ENST00000344204 CCDC18Q5T9S5 1454 aa16.61■□□□□ 0.25
TRIO-202ENST00000344204 MORC1Q86VD1 984 aa16.6■□□□□ 0.25
TRIO-202ENST00000344204 STAG3Q9UJ98 1225 aa16.6■□□□□ 0.25
TRIO-202ENST00000344204 REC8O95072 547 aa16.59■□□□□ 0.25
TRIO-202ENST00000344204 FOXD4L6Q3SYB3 417 aaPredicted RBP16.59■□□□□ 0.25
TRIO-202ENST00000344204 FOXD4L3Q6VB84 417 aaPredicted RBP16.59■□□□□ 0.25
TRIO-202ENST00000344204 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
TRIO-202ENST00000344204 TRIM6-TRIM34B2RNG4 842 aa16.59■□□□□ 0.25
TRIO-202ENST00000344204 HAP1P54257 671 aaPredicted RBP16.59■□□□□ 0.25
TRIO-202ENST00000344204 GPATCH3Q96I76 525 aa16.59■□□□□ 0.25
TRIO-202ENST00000344204 MCM4P33991 863 aa16.58■□□□□ 0.25
TRIO-202ENST00000344204 KANK4Q5T7N3 995 aaPredicted RBP16.58■□□□□ 0.25
TRIO-202ENST00000344204 RNF214Q8ND24 703 aa16.58■□□□□ 0.24
TRIO-202ENST00000344204 DCAF11Q8TEB1 546 aa16.58■□□□□ 0.24
TRIO-202ENST00000344204 TPM1P09493 284 aa16.58■□□□□ 0.24
TRIO-202ENST00000344204 CCDC191Q8NCU4 936 aa16.58■□□□□ 0.24
TRIO-202ENST00000344204 DNAJC2Q99543 621 aaKnown RBP16.58■□□□□ 0.24
TRIO-202ENST00000344204 HMMRO75330 724 aa16.58■□□□□ 0.24
TRIO-202ENST00000344204 WIZO95785 1651 aa16.57■□□□□ 0.24
TRIO-202ENST00000344204 AAMPQ13685 434 aa16.57■□□□□ 0.24
TRIO-202ENST00000344204 LETM1O95202 739 aaPredicted RBP16.57■□□□□ 0.24
TRIO-202ENST00000344204 HSP90AB3PQ58FF7 597 aa16.57■□□□□ 0.24
TRIO-202ENST00000344204 CCDC112Q8NEF3 446 aa16.57■□□□□ 0.24
TRIO-202ENST00000344204 TIGD1Q96MW7 591 aa16.57■□□□□ 0.24
TRIO-202ENST00000344204 FBLN2P98095 1184 aa16.56■□□□□ 0.24
TRIO-202ENST00000344204 CBX1P83916 185 aa16.56■□□□□ 0.24
TRIO-202ENST00000344204 RUFY1Q96T51 708 aa16.56■□□□□ 0.24
TRIO-202ENST00000344204 CCDC88BA6NC98 1476 aa16.56■□□□□ 0.24
TRIO-202ENST00000344204 HSP90B1P14625 803 aaKnown RBP16.55■□□□□ 0.24
TRIO-202ENST00000344204 CLUAP1Q96AJ1 413 aa16.55■□□□□ 0.24
TRIO-202ENST00000344204 E9PSI1 815 aa16.55■□□□□ 0.24
TRIO-202ENST00000344204 CHMP4AQ9BY43 222 aa16.54■□□□□ 0.24
TRIO-202ENST00000344204 CCP110O43303 1012 aa16.54■□□□□ 0.24
TRIO-202ENST00000344204 GTPBP4Q9BZE4 634 aaKnown RBP16.54■□□□□ 0.24
TRIO-202ENST00000344204 CLCN1P35523 988 aa16.54■□□□□ 0.24
TRIO-202ENST00000344204 CCDC146Q8IYE0 955 aa16.53■□□□□ 0.24
TRIO-202ENST00000344204 BCL11BQ9C0K0 894 aaPredicted RBP16.53■□□□□ 0.24
TRIO-202ENST00000344204 TSR1Q2NL82 804 aaKnown RBP16.53■□□□□ 0.24
TRIO-202ENST00000344204 USP47Q96K76 1375 aa16.53■□□□□ 0.24
TRIO-202ENST00000344204 RRP12Q5JTH9 1297 aaKnown RBP16.52■□□□□ 0.23
TRIO-202ENST00000344204 ERCC4Q92889 916 aaPredicted RBP16.52■□□□□ 0.23
TRIO-202ENST00000344204 KIAA0754O94854 1291 aa16.52■□□□□ 0.23
TRIO-202ENST00000344204 PPP4R3BQ5MIZ7 849 aa16.52■□□□□ 0.23
TRIO-202ENST00000344204 H3BQV1 296 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms