RNA–Protein interactions for RNA: ENST00000338402.6

SNRPEP3-201, Transcript of small nuclear ribonucleoprotein polypeptide E pseudogene 3, humanhuman

BASIC

Gene SNRPEP3, Length 276 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP3-201ENST00000338402 ARSIQ5FYB1 569 aa8.19□□□□□ -1.1
SNRPEP3-201ENST00000338402 ZNF710Q8N1W2 664 aa8.19□□□□□ -1.1
SNRPEP3-201ENST00000338402 KDM4FA0A1W2PPD8 638 aa8.18□□□□□ -1.1
SNRPEP3-201ENST00000338402 TTLL12Q14166 644 aaPredicted RBP8.18□□□□□ -1.1
SNRPEP3-201ENST00000338402 AMHR2Q16671 573 aa8.18□□□□□ -1.1
SNRPEP3-201ENST00000338402 ZNF454Q8N9F8 522 aa8.18□□□□□ -1.1
SNRPEP3-201ENST00000338402 NPDC1Q9NQX5 325 aaPredicted RBP8.18□□□□□ -1.1
SNRPEP3-201ENST00000338402 HOXB3P14651 431 aaPredicted RBP8.17□□□□□ -1.1
SNRPEP3-201ENST00000338402 FOSBP53539 338 aa8.17□□□□□ -1.1
SNRPEP3-201ENST00000338402 KHSRPQ92945 711 aaKnown RBP eCLIP8.17□□□□□ -1.1
SNRPEP3-201ENST00000338402 ZSWIM6Q9HCJ5 1215 aa8.17□□□□□ -1.1
SNRPEP3-201ENST00000338402 PARP9Q8IXQ6 854 aa8.16□□□□□ -1.1
SNRPEP3-201ENST00000338402 ZDHHC16Q969W1 377 aa8.16□□□□□ -1.1
SNRPEP3-201ENST00000338402 C6orf132Q5T0Z8 1188 aa8.15□□□□□ -1.1
SNRPEP3-201ENST00000338402 C14orf37Q86TY3 774 aa8.15□□□□□ -1.1
SNRPEP3-201ENST00000338402 CERKQ8TCT0 537 aa8.15□□□□□ -1.1
SNRPEP3-201ENST00000338402 FAM117AQ9C073 453 aa8.15□□□□□ -1.1
SNRPEP3-201ENST00000338402 GPR153Q6NV75 609 aa8.14□□□□□ -1.11
SNRPEP3-201ENST00000338402 DDRGK1Q96HY6 314 aa8.14□□□□□ -1.11
SNRPEP3-201ENST00000338402 ADAM33Q9BZ11 813 aa8.12□□□□□ -1.11
SNRPEP3-201ENST00000338402 SNPHO15079 494 aa8.11□□□□□ -1.11
SNRPEP3-201ENST00000338402 GIGYF2Q6Y7W6 1299 aaKnown RBP8.11□□□□□ -1.11
SNRPEP3-201ENST00000338402 LHX6Q9UPM6 363 aa8.11□□□□□ -1.11
SNRPEP3-201ENST00000338402 PSDA5PKW4 1024 aaPredicted RBP8.1□□□□□ -1.11
SNRPEP3-201ENST00000338402 CLCN1P35523 988 aa8.1□□□□□ -1.11
SNRPEP3-201ENST00000338402 PPP4R3BQ5MIZ7 849 aa8.1□□□□□ -1.11
SNRPEP3-201ENST00000338402 PADI6Q6TGC4 694 aa8.1□□□□□ -1.11
SNRPEP3-201ENST00000338402 OATP04181 439 aa8.09□□□□□ -1.11
SNRPEP3-201ENST00000338402 MDM2Q00987 491 aaPredicted RBP8.08□□□□□ -1.12
SNRPEP3-201ENST00000338402 FAM161AQ3B820 660 aa8.08□□□□□ -1.12
SNRPEP3-201ENST00000338402 PLEKHG3A1L390 1219 aa8.07□□□□□ -1.12
SNRPEP3-201ENST00000338402 PRSS12P56730 875 aa8.07□□□□□ -1.12
SNRPEP3-201ENST00000338402 REPIN1Q9BWE0 567 aaKnown RBP8.07□□□□□ -1.12
SNRPEP3-201ENST00000338402 GPCPD1Q9NPB8 672 aa8.07□□□□□ -1.12
SNRPEP3-201ENST00000338402 RBM27Q9P2N5 1060 aaKnown RBP8.07□□□□□ -1.12
SNRPEP3-201ENST00000338402 MS4A1P11836 297 aa8.06□□□□□ -1.12
SNRPEP3-201ENST00000338402 METTL3Q86U44 580 aaKnown RBP8.06□□□□□ -1.12
SNRPEP3-201ENST00000338402 CDCA7LQ96GN5 454 aa8.06□□□□□ -1.12
SNRPEP3-201ENST00000338402 PHOX2BQ99453 314 aa8.06□□□□□ -1.12
SNRPEP3-201ENST00000338402 ADGRG1Q9Y653 693 aa8.06□□□□□ -1.12
SNRPEP3-201ENST00000338402 BCL2L12Q9HB09 334 aa8.05□□□□□ -1.12
SNRPEP3-201ENST00000338402 HOXB1P14653 301 aaPredicted RBP8.04□□□□□ -1.12
SNRPEP3-201ENST00000338402 PTPREP23469 700 aa8.04□□□□□ -1.12
SNRPEP3-201ENST00000338402 SSTR3P32745 418 aaPredicted RBP8.04□□□□□ -1.12
SNRPEP3-201ENST00000338402 TTC13Q8NBP0 860 aa8.04□□□□□ -1.12
SNRPEP3-201ENST00000338402 RBM46Q8TBY0 533 aaKnown RBP8.04□□□□□ -1.12
SNRPEP3-201ENST00000338402 PXYLP1Q8TE99 480 aa8.04□□□□□ -1.12
SNRPEP3-201ENST00000338402 NLRP7Q8WX94 980 aa8.03□□□□□ -1.12
SNRPEP3-201ENST00000338402 TMUB1Q9BVT8 246 aa8.03□□□□□ -1.12
SNRPEP3-201ENST00000338402 PPP1R3GB7ZBB8 358 aa8.02□□□□□ -1.13
SNRPEP3-201ENST00000338402 COL9A1P20849 921 aa8.02□□□□□ -1.13
SNRPEP3-201ENST00000338402 KCNH8Q96L42 1107 aa8.01□□□□□ -1.13
SNRPEP3-201ENST00000338402 GOPCQ9HD26 462 aa8.01□□□□□ -1.13
SNRPEP3-201ENST00000338402 PCMTD1Q96MG8 357 aaPredicted RBP8□□□□□ -1.13
SNRPEP3-201ENST00000338402 BEGAINQ9BUH8 593 aa8□□□□□ -1.13
SNRPEP3-201ENST00000338402 FAM217BQ9NTX9 383 aaPredicted RBP8□□□□□ -1.13
SNRPEP3-201ENST00000338402 OTUD5Q96G74 571 aa7.99□□□□□ -1.13
SNRPEP3-201ENST00000338402 ATP1B4Q9UN42 357 aaPredicted RBP7.99□□□□□ -1.13
SNRPEP3-201ENST00000338402 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.98□□□□□ -1.13
SNRPEP3-201ENST00000338402 PACS2Q86VP3 889 aa7.98□□□□□ -1.13
SNRPEP3-201ENST00000338402 KCNK17Q96T54 332 aa7.98□□□□□ -1.13
SNRPEP3-201ENST00000338402 RSPH6AQ9H0K4 717 aa7.98□□□□□ -1.13
SNRPEP3-201ENST00000338402 FAM198AQ9UFP1 575 aa7.98□□□□□ -1.13
SNRPEP3-201ENST00000338402 TSKSQ9UJT2 592 aa7.98□□□□□ -1.13
SNRPEP3-201ENST00000338402 RCCD1A6NED2 376 aa7.97□□□□□ -1.13
SNRPEP3-201ENST00000338402 TRIM6-TRIM34B2RNG4 842 aa7.97□□□□□ -1.13
SNRPEP3-201ENST00000338402 NBPF26B4DH59 902 aa7.97□□□□□ -1.13
SNRPEP3-201ENST00000338402 NUDT18Q6ZVK8 323 aa7.97□□□□□ -1.13
SNRPEP3-201ENST00000338402 SH3D19Q5HYK7 790 aa7.96□□□□□ -1.14
SNRPEP3-201ENST00000338402 EYA1Q99502 592 aa7.96□□□□□ -1.14
SNRPEP3-201ENST00000338402 PNMA3Q9UL41 463 aa7.96□□□□□ -1.14
SNRPEP3-201ENST00000338402 TATDN2Q93075 761 aa7.95□□□□□ -1.14
SNRPEP3-201ENST00000338402 DNAJB2P25686 324 aa7.94□□□□□ -1.14
SNRPEP3-201ENST00000338402 SKIV2LQ15477 1246 aaKnown RBP7.94□□□□□ -1.14
SNRPEP3-201ENST00000338402 PROX2Q3B8N5 592 aa7.94□□□□□ -1.14
SNRPEP3-201ENST00000338402 LHX8Q68G74 356 aa7.94□□□□□ -1.14
SNRPEP3-201ENST00000338402 ERBB3P21860 1342 aa7.94□□□□□ -1.14
SNRPEP3-201ENST00000338402 SULF1Q8IWU6 871 aa7.93□□□□□ -1.14
SNRPEP3-201ENST00000338402 SMAPO00193 183 aa7.92□□□□□ -1.14
SNRPEP3-201ENST00000338402 ONECUT3O60422 494 aaPredicted RBP7.92□□□□□ -1.14
SNRPEP3-201ENST00000338402 DIXDC1Q155Q3 683 aa7.92□□□□□ -1.14
SNRPEP3-201ENST00000338402 VARS2Q5ST30 1063 aaKnown RBP7.92□□□□□ -1.14
SNRPEP3-201ENST00000338402 POLR3EQ9NVU0 708 aa7.92□□□□□ -1.14
SNRPEP3-201ENST00000338402 DDX11L8A8MPP1 907 aa7.91□□□□□ -1.14
SNRPEP3-201ENST00000338402 C3orf80F5H4A9 247 aa7.91□□□□□ -1.14
SNRPEP3-201ENST00000338402 FLIIQ13045 1269 aa7.91□□□□□ -1.14
SNRPEP3-201ENST00000338402 KIAA1468Q9P260 1216 aa7.91□□□□□ -1.14
SNRPEP3-201ENST00000338402 SUPT5HO00267 1087 aaKnown RBP7.9□□□□□ -1.14
SNRPEP3-201ENST00000338402 ARHGAP33O14559 1287 aa7.9□□□□□ -1.14
SNRPEP3-201ENST00000338402 PSEN2P49810 448 aa7.9□□□□□ -1.14
SNRPEP3-201ENST00000338402 MYSM1Q5VVJ2 828 aa7.9□□□□□ -1.14
SNRPEP3-201ENST00000338402 ZBED2Q9BTP6 218 aa7.9□□□□□ -1.14
SNRPEP3-201ENST00000338402 TBC1D2Q9BYX2 928 aa7.9□□□□□ -1.14
SNRPEP3-201ENST00000338402 ZMYND15Q9H091 742 aa7.9□□□□□ -1.14
SNRPEP3-201ENST00000338402 TMEM134Q9H6X4 195 aa7.9□□□□□ -1.14
SNRPEP3-201ENST00000338402 CD46P15529 392 aa7.88□□□□□ -1.15
SNRPEP3-201ENST00000338402 CLK2P49760 499 aaKnown RBP7.88□□□□□ -1.15
SNRPEP3-201ENST00000338402 EMP3P54852 163 aa7.88□□□□□ -1.15
SNRPEP3-201ENST00000338402 NUTM1Q86Y26 1132 aa7.88□□□□□ -1.15
SNRPEP3-201ENST00000338402 PROCA1Q8NCQ7 364 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms