RNA–Protein interactions for RNA: ENST00000333229.6

BRWD1-201, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRWD1, Length 10,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-201ENST00000333229 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.42■□□□□ 0.22
BRWD1-201ENST00000333229 WWC1Q8IX03 1113 aa16.41■□□□□ 0.22
BRWD1-201ENST00000333229 HOMER1Q86YM7 354 aa16.41■□□□□ 0.22
BRWD1-201ENST00000333229 ERCC4Q92889 916 aaPredicted RBP16.41■□□□□ 0.22
BRWD1-201ENST00000333229 GPATCH3Q96I76 525 aa16.41■□□□□ 0.22
BRWD1-201ENST00000333229 ITPRIPQ8IWB1 547 aa16.4■□□□□ 0.22
BRWD1-201ENST00000333229 TSPYL1Q9H0U9 437 aa16.4■□□□□ 0.22
BRWD1-201ENST00000333229 KANK1Q14678 1352 aa16.4■□□□□ 0.22
BRWD1-201ENST00000333229 STK26Q9P289 416 aa16.4■□□□□ 0.22
BRWD1-201ENST00000333229 KIAA0754O94854 1291 aa16.4■□□□□ 0.22
BRWD1-201ENST00000333229 DIAPH3Q9NSV4 1193 aa16.39■□□□□ 0.21
BRWD1-201ENST00000333229 BECN2A8MW95 431 aa16.39■□□□□ 0.21
BRWD1-201ENST00000333229 MNS1Q8NEH6 495 aa16.38■□□□□ 0.21
BRWD1-201ENST00000333229 ATP6V1DQ9Y5K8 247 aa16.38■□□□□ 0.21
BRWD1-201ENST00000333229 GIMAP7Q8NHV1 300 aa16.37■□□□□ 0.21
BRWD1-201ENST00000333229 TRIM6-TRIM34B2RNG4 842 aa16.37■□□□□ 0.21
BRWD1-201ENST00000333229 CAGE1Q8TC20 777 aa16.37■□□□□ 0.21
BRWD1-201ENST00000333229 ST18O60284 1047 aa16.37■□□□□ 0.21
BRWD1-201ENST00000333229 EIF4G1Q04637 1599 aaKnown RBP16.37■□□□□ 0.21
BRWD1-201ENST00000333229 MYO6Q9UM54 1294 aa16.36■□□□□ 0.21
BRWD1-201ENST00000333229 TOMM22Q9NS69 142 aa16.36■□□□□ 0.21
BRWD1-201ENST00000333229 MARCH6O60337 910 aa16.36■□□□□ 0.21
BRWD1-201ENST00000333229 FOXD4L1Q9NU39 408 aa16.36■□□□□ 0.21
BRWD1-201ENST00000333229 FOXD4L5Q5VV16 416 aaPredicted RBP16.35■□□□□ 0.21
BRWD1-201ENST00000333229 FOXD4L4Q8WXT5 416 aaPredicted RBP16.35■□□□□ 0.21
BRWD1-201ENST00000333229 TMF1P82094 1093 aa16.34■□□□□ 0.21
BRWD1-201ENST00000333229 ANKRD20A12PQ8NF67 263 aa16.33■□□□□ 0.2
BRWD1-201ENST00000333229 CNKSR2Q8WXI2 1034 aa16.33■□□□□ 0.2
BRWD1-201ENST00000333229 ERCC6Q03468 1493 aa16.33■□□□□ 0.2
BRWD1-201ENST00000333229 MFAP1P55081 439 aaKnown RBP16.32■□□□□ 0.2
BRWD1-201ENST00000333229 RRP9O43818 475 aaKnown RBP16.31■□□□□ 0.2
BRWD1-201ENST00000333229 DDX49Q9Y6V7 483 aaKnown RBP16.31■□□□□ 0.2
BRWD1-201ENST00000333229 RWDD1Q9H446 243 aaPredicted RBP16.31■□□□□ 0.2
BRWD1-201ENST00000333229 IPO8O15397 1037 aaKnown RBP16.31■□□□□ 0.2
BRWD1-201ENST00000333229 SF3A1Q15459 793 aaKnown RBP16.3■□□□□ 0.2
BRWD1-201ENST00000333229 CLASRPQ8N2M8 674 aaKnown RBP16.3■□□□□ 0.2
BRWD1-201ENST00000333229 DCAF11Q8TEB1 546 aa16.3■□□□□ 0.2
BRWD1-201ENST00000333229 IFT57Q9NWB7 429 aa16.3■□□□□ 0.2
BRWD1-201ENST00000333229 TSHZ2Q9NRE2 1034 aa16.29■□□□□ 0.2
BRWD1-201ENST00000333229 TCEAL9Q9UHQ7 104 aa16.29■□□□□ 0.2
BRWD1-201ENST00000333229 FRAT2O75474 233 aaPredicted RBP16.29■□□□□ 0.2
BRWD1-201ENST00000333229 HDGFL2Q7Z4V5 671 aaPredicted RBP16.28■□□□□ 0.2
BRWD1-201ENST00000333229 CCDC39Q9UFE4 941 aa16.28■□□□□ 0.2
BRWD1-201ENST00000333229 SIN3AQ96ST3 1273 aa16.28■□□□□ 0.2
BRWD1-201ENST00000333229 CCDC173Q0VFZ6 552 aa16.27■□□□□ 0.2
BRWD1-201ENST00000333229 HMGN5P82970 282 aaKnown RBP16.27■□□□□ 0.19
BRWD1-201ENST00000333229 BCCIPQ9P287 314 aaKnown RBP eCLIP16.26■□□□□ 0.19
BRWD1-201ENST00000333229 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.26■□□□□ 0.19
BRWD1-201ENST00000333229 GOLGA3Q08378 1498 aa16.26■□□□□ 0.19
BRWD1-201ENST00000333229 HDGFP51858 240 aaKnown RBP16.25■□□□□ 0.19
BRWD1-201ENST00000333229 STK31Q9BXU1 1019 aa16.25■□□□□ 0.19
BRWD1-201ENST00000333229 RSPH4AQ5TD94 716 aa16.25■□□□□ 0.19
BRWD1-201ENST00000333229 H3BQV1 296 aa16.25■□□□□ 0.19
BRWD1-201ENST00000333229 IFFO2Q5TF58 517 aa16.25■□□□□ 0.19
BRWD1-201ENST00000333229 HOOK1Q9UJC3 728 aaKnown RBP16.25■□□□□ 0.19
BRWD1-201ENST00000333229 KTN1Q86UP2 1357 aaKnown RBP16.25■□□□□ 0.19
BRWD1-201ENST00000333229 CEP162Q5TB80 1403 aa16.25■□□□□ 0.19
BRWD1-201ENST00000333229 U2AF1L5P0DN76 240 aaPredicted RBP16.25■□□□□ 0.19
BRWD1-201ENST00000333229 U2AF1Q01081 240 aaKnown RBP eCLIP16.25■□□□□ 0.191e-6■■■■□ 22
BRWD1-201ENST00000333229 AXDND1Q5T1B0 1012 aaPredicted RBP16.25■□□□□ 0.19
BRWD1-201ENST00000333229 SPAG9O60271 1321 aaKnown RBP16.24■□□□□ 0.19
BRWD1-201ENST00000333229 MAPK8IP2Q13387 824 aaPredicted RBP16.24■□□□□ 0.19
BRWD1-201ENST00000333229 GOLGA6L10A6NI86 522 aa16.24■□□□□ 0.19
BRWD1-201ENST00000333229 RAD21O60216 631 aa16.24■□□□□ 0.19
BRWD1-201ENST00000333229 PMFBP1Q8TBY8 1022 aa16.24■□□□□ 0.19
BRWD1-201ENST00000333229 CHMP4CQ96CF2 233 aa16.24■□□□□ 0.19
BRWD1-201ENST00000333229 CCNB3Q8WWL7 1395 aa16.24■□□□□ 0.19
BRWD1-201ENST00000333229 SLC4A10Q6U841 1118 aa16.24■□□□□ 0.19
BRWD1-201ENST00000333229 PCMTD1Q96MG8 357 aaPredicted RBP16.23■□□□□ 0.19
BRWD1-201ENST00000333229 GTF2E1P29083 439 aaPredicted RBP16.23■□□□□ 0.19
BRWD1-201ENST00000333229 AEBP1Q8IUX7 1158 aa16.23■□□□□ 0.19
BRWD1-201ENST00000333229 R3HCC1Q9Y3T6 440 aaKnown RBP16.23■□□□□ 0.19
BRWD1-201ENST00000333229 RALBP1Q15311 655 aa16.23■□□□□ 0.19
BRWD1-201ENST00000333229 CT47B1P0C2W7 299 aaPredicted RBP16.22■□□□□ 0.19
BRWD1-201ENST00000333229 CCP110O43303 1012 aa16.21■□□□□ 0.19
BRWD1-201ENST00000333229 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.21■□□□□ 0.192e-7■■■■■ 137.1
BRWD1-201ENST00000333229 NAP1L1P55209 391 aaKnown RBP16.2■□□□□ 0.18
BRWD1-201ENST00000333229 CCAR1Q8IX12 1150 aaKnown RBP16.2■□□□□ 0.18
BRWD1-201ENST00000333229 LTV1Q96GA3 475 aaPredicted RBP16.19■□□□□ 0.18
BRWD1-201ENST00000333229 SPATA24Q86W54 205 aa16.19■□□□□ 0.18
BRWD1-201ENST00000333229 KAT6BQ8WYB5 2073 aa16.19■□□□□ 0.18
BRWD1-201ENST00000333229 DDX11Q96FC9 970 aa16.18■□□□□ 0.18
BRWD1-201ENST00000333229 EZRP15311 586 aaKnown RBP16.18■□□□□ 0.18
BRWD1-201ENST00000333229 TRIM34Q9BYJ4 488 aa16.18■□□□□ 0.18
BRWD1-201ENST00000333229 MSH5O43196 834 aa16.17■□□□□ 0.18
BRWD1-201ENST00000333229 ANKRD18AQ8IVF6 992 aa16.17■□□□□ 0.18
BRWD1-201ENST00000333229 CTDP1Q9Y5B0 961 aaPredicted RBP16.17■□□□□ 0.18
BRWD1-201ENST00000333229 FOXD4L6Q3SYB3 417 aaPredicted RBP16.17■□□□□ 0.18
BRWD1-201ENST00000333229 FOXD4L3Q6VB84 417 aaPredicted RBP16.17■□□□□ 0.18
BRWD1-201ENST00000333229 ODF2Q5BJF6 829 aa16.17■□□□□ 0.18
BRWD1-201ENST00000333229 CT47A1Q5JQC4 288 aaPredicted RBP16.17■□□□□ 0.18
BRWD1-201ENST00000333229 SMC4Q9NTJ3 1288 aa16.17■□□□□ 0.18
BRWD1-201ENST00000333229 EIF3JO75822 258 aaKnown RBP16.16■□□□□ 0.18
BRWD1-201ENST00000333229 ROCK2O75116 1388 aaKnown RBP16.16■□□□□ 0.18
BRWD1-201ENST00000333229 ENOX2Q16206 610 aaKnown RBP16.16■□□□□ 0.18
BRWD1-201ENST00000333229 HSP90AB2PQ58FF8 381 aa16.16■□□□□ 0.18
BRWD1-201ENST00000333229 FBXW7Q969H0 707 aa16.16■□□□□ 0.18
BRWD1-201ENST00000333229 NASPP49321 788 aaPredicted RBP16.15■□□□□ 0.18
BRWD1-201ENST00000333229 ERLIN2O94905 339 aa16.15■□□□□ 0.18
BRWD1-201ENST00000333229 MCTP1Q6DN14 999 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms