RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 ARHGAP5Q13017 1502 aa16.59■□□□□ 0.25
VSTM4-202ENST00000332853 ERICH6BQ5W0A0 696 aa16.59■□□□□ 0.25
VSTM4-202ENST00000332853 PRG4Q92954 1404 aaPredicted RBP16.59■□□□□ 0.25
VSTM4-202ENST00000332853 SMC4Q9NTJ3 1288 aa16.59■□□□□ 0.25
VSTM4-202ENST00000332853 CCDC7Q96M83 1385 aa16.58■□□□□ 0.24
VSTM4-202ENST00000332853 MINK1Q8N4C8 1332 aaPredicted RBP16.58■□□□□ 0.24
VSTM4-202ENST00000332853 IPO8O15397 1037 aaKnown RBP16.57■□□□□ 0.24
VSTM4-202ENST00000332853 AFAP1Q8N556 730 aa16.57■□□□□ 0.24
VSTM4-202ENST00000332853 WASHC2AQ641Q2 1341 aa16.56■□□□□ 0.24
VSTM4-202ENST00000332853 EID1Q9Y6B2 187 aa16.56■□□□□ 0.24
VSTM4-202ENST00000332853 IFT140Q96RY7 1462 aa16.56■□□□□ 0.24
VSTM4-202ENST00000332853 EHBP1L1Q8N3D4 1523 aa16.56■□□□□ 0.24
VSTM4-202ENST00000332853 NGDNQ8NEJ9 315 aaKnown RBP16.56■□□□□ 0.24
VSTM4-202ENST00000332853 CENPJQ9HC77 1338 aaPredicted RBP16.55■□□□□ 0.24
VSTM4-202ENST00000332853 BCL2L13Q9BXK5 485 aa16.55■□□□□ 0.24
VSTM4-202ENST00000332853 LTV1Q96GA3 475 aaPredicted RBP16.55■□□□□ 0.24
VSTM4-202ENST00000332853 VGFO15240 615 aaPredicted RBP16.54■□□□□ 0.24
VSTM4-202ENST00000332853 PDE3BQ13370 1112 aa16.54■□□□□ 0.24
VSTM4-202ENST00000332853 ZBED9Q6R2W3 1325 aa16.54■□□□□ 0.24
VSTM4-202ENST00000332853 CDK13Q14004 1512 aaKnown RBP16.53■□□□□ 0.24
VSTM4-202ENST00000332853 TRIM44Q96DX7 344 aaPredicted RBP16.53■□□□□ 0.24
VSTM4-202ENST00000332853 HSCBQ8IWL3 235 aa16.53■□□□□ 0.24
VSTM4-202ENST00000332853 RWDD1Q9H446 243 aaPredicted RBP16.53■□□□□ 0.24
VSTM4-202ENST00000332853 RTN4Q9NQC3 1192 aaKnown RBP16.52■□□□□ 0.24
VSTM4-202ENST00000332853 SYNJ2O15056 1496 aa16.52■□□□□ 0.24
VSTM4-202ENST00000332853 KCNJ4P48050 445 aa16.52■□□□□ 0.24
VSTM4-202ENST00000332853 CALD1Q05682 793 aaKnown RBP16.52■□□□□ 0.24
VSTM4-202ENST00000332853 EXOC6Q8TAG9 804 aa16.52■□□□□ 0.24
VSTM4-202ENST00000332853 PCF11O94913 1555 aaKnown RBP16.52■□□□□ 0.23
VSTM4-202ENST00000332853 TCERG1O14776 1098 aaKnown RBP16.52■□□□□ 0.23
VSTM4-202ENST00000332853 HECW1Q76N89 1606 aa16.52■□□□□ 0.23
VSTM4-202ENST00000332853 EVC2Q86UK5 1308 aa16.52■□□□□ 0.23
VSTM4-202ENST00000332853 CSB-PGBD3P0DP91 1061 aa16.51■□□□□ 0.23
VSTM4-202ENST00000332853 FAM69CQ0P6D2 419 aa16.51■□□□□ 0.23
VSTM4-202ENST00000332853 CNTLNQ9NXG0 1405 aa16.51■□□□□ 0.23
VSTM4-202ENST00000332853 APAF1O14727 1248 aa16.5■□□□□ 0.23
VSTM4-202ENST00000332853 CGNL1Q0VF96 1302 aa16.5■□□□□ 0.23
VSTM4-202ENST00000332853 SUPT6HQ7KZ85 1726 aaKnown RBP16.5■□□□□ 0.23
VSTM4-202ENST00000332853 AMPHP49418 695 aa16.49■□□□□ 0.23
VSTM4-202ENST00000332853 ELL2O00472 640 aaPredicted RBP16.49■□□□□ 0.23
VSTM4-202ENST00000332853 TMEM132EQ6IEE7 984 aa16.49■□□□□ 0.23
VSTM4-202ENST00000332853 NAP1L2Q9ULW6 460 aaPredicted RBP16.48■□□□□ 0.23
VSTM4-202ENST00000332853 RRP1P56182 461 aaKnown RBP16.48■□□□□ 0.23
VSTM4-202ENST00000332853 CRBNQ96SW2 442 aa16.48■□□□□ 0.23
VSTM4-202ENST00000332853 SLC4A10Q6U841 1118 aa16.48■□□□□ 0.23
VSTM4-202ENST00000332853 NPHP1O15259 732 aa16.48■□□□□ 0.23
VSTM4-202ENST00000332853 NBPF8Q3BBV2 869 aa16.48■□□□□ 0.23
VSTM4-202ENST00000332853 PMFBP1Q8TBY8 1022 aa16.48■□□□□ 0.23
VSTM4-202ENST00000332853 ABCA10Q8WWZ4 1543 aa16.47■□□□□ 0.23
VSTM4-202ENST00000332853 ZNF330Q9Y3S2 320 aaPredicted RBP16.47■□□□□ 0.23
VSTM4-202ENST00000332853 C9orf84Q5VXU9 1444 aa16.46■□□□□ 0.23
VSTM4-202ENST00000332853 MFAP1P55081 439 aaKnown RBP16.46■□□□□ 0.23
VSTM4-202ENST00000332853 FGD1P98174 961 aa16.46■□□□□ 0.23
VSTM4-202ENST00000332853 SLKQ9H2G2 1235 aaPredicted RBP16.46■□□□□ 0.23
VSTM4-202ENST00000332853 NBPF1Q3BBV0 1214 aa16.46■□□□□ 0.23
VSTM4-202ENST00000332853 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
VSTM4-202ENST00000332853 HFM1A2PYH4 1435 aa16.44■□□□□ 0.22
VSTM4-202ENST00000332853 DAPK1P53355 1430 aa16.44■□□□□ 0.22
VSTM4-202ENST00000332853 TROQ12816 1431 aaPredicted RBP16.44■□□□□ 0.22
VSTM4-202ENST00000332853 PTMAP06454 111 aaKnown RBP16.44■□□□□ 0.22
VSTM4-202ENST00000332853 COG3Q96JB2 828 aa16.43■□□□□ 0.22
VSTM4-202ENST00000332853 STK31Q9BXU1 1019 aa16.43■□□□□ 0.22
VSTM4-202ENST00000332853 EPRSP07814 1512 aaKnown RBP16.43■□□□□ 0.22
VSTM4-202ENST00000332853 CABP2Q9NPB3 220 aa16.43■□□□□ 0.22
VSTM4-202ENST00000332853 DEKP35659 375 aaKnown RBP16.42■□□□□ 0.22
VSTM4-202ENST00000332853 PLCB2Q00722 1185 aa16.42■□□□□ 0.22
VSTM4-202ENST00000332853 CFAP70Q5T0N1 1121 aa16.42■□□□□ 0.22
VSTM4-202ENST00000332853 MIA2Q96PC5 1412 aa16.42■□□□□ 0.22
VSTM4-202ENST00000332853 E9PSI1 815 aa16.41■□□□□ 0.22
VSTM4-202ENST00000332853 COG6Q9Y2V7 657 aa16.41■□□□□ 0.22
VSTM4-202ENST00000332853 IQGAP2Q13576 1575 aa16.41■□□□□ 0.22
VSTM4-202ENST00000332853 LAMC3Q9Y6N6 1575 aa16.41■□□□□ 0.22
VSTM4-202ENST00000332853 KIAA1107Q9UPP5 1409 aa16.4■□□□□ 0.22
VSTM4-202ENST00000332853 MCCP23508 829 aa16.39■□□□□ 0.21
VSTM4-202ENST00000332853 PEG3Q9GZU2 1588 aa16.39■□□□□ 0.21
VSTM4-202ENST00000332853 IPO9Q96P70 1041 aaKnown RBP16.39■□□□□ 0.21
VSTM4-202ENST00000332853 CUL7Q14999 1698 aa16.39■□□□□ 0.21
VSTM4-202ENST00000332853 LMOD3Q0VAK6 560 aa16.38■□□□□ 0.21
VSTM4-202ENST00000332853 ZRSR1Q15695 479 aaKnown RBP16.38■□□□□ 0.21
VSTM4-202ENST00000332853 GGNBP2Q9H3C7 697 aa16.37■□□□□ 0.21
VSTM4-202ENST00000332853 BIVM-ERCC5R4GMW8 1640 aa16.37■□□□□ 0.21
VSTM4-202ENST00000332853 NAIPQ13075 1403 aa16.36■□□□□ 0.21
VSTM4-202ENST00000332853 FOXD4L1Q9NU39 408 aa16.36■□□□□ 0.21
VSTM4-202ENST00000332853 DIAPH1O60610 1272 aaKnown RBP16.36■□□□□ 0.21
VSTM4-202ENST00000332853 URB2Q14146 1524 aaKnown RBP16.36■□□□□ 0.21
VSTM4-202ENST00000332853 TRIM6-TRIM34B2RNG4 842 aa16.35■□□□□ 0.21
VSTM4-202ENST00000332853 SCAPERQ9BY12 1400 aa16.35■□□□□ 0.21
VSTM4-202ENST00000332853 ADAMTS8Q9UP79 889 aa16.35■□□□□ 0.21
VSTM4-202ENST00000332853 KIAA0586Q9BVV6 1533 aa16.35■□□□□ 0.21
VSTM4-202ENST00000332853 GZF1Q9H116 711 aaPredicted RBP16.35■□□□□ 0.21
VSTM4-202ENST00000332853 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
VSTM4-202ENST00000332853 RIPK4P57078 832 aa16.35■□□□□ 0.21
VSTM4-202ENST00000332853 PTPN23Q9H3S7 1636 aa16.35■□□□□ 0.21
VSTM4-202ENST00000332853 SLC4A3P48751 1232 aa16.35■□□□□ 0.21
VSTM4-202ENST00000332853 PLB1Q6P1J6 1458 aa16.34■□□□□ 0.21
VSTM4-202ENST00000332853 CENPQQ7L2Z9 268 aaPredicted RBP16.34■□□□□ 0.21
VSTM4-202ENST00000332853 CHMP3Q9Y3E7 222 aa16.34■□□□□ 0.21
VSTM4-202ENST00000332853 PDE4AP27815 886 aa16.34■□□□□ 0.21
VSTM4-202ENST00000332853 HMOX1P09601 288 aa16.34■□□□□ 0.21
VSTM4-202ENST00000332853 CDCA7LQ96GN5 454 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms