RNA–Protein interactions for RNA: ENST00000327578.9

PCM1-202, Transcript of pericentriolar material 1, humanhuman

TSL 5 BASIC

Gene PCM1, Length 8,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-202ENST00000327578 CLUAP1Q96AJ1 413 aa16.95■□□□□ 0.3
PCM1-202ENST00000327578 AK7Q96M32 723 aa16.95■□□□□ 0.3
PCM1-202ENST00000327578 RILPL2Q969X0 211 aa16.95■□□□□ 0.3
PCM1-202ENST00000327578 TOMM22Q9NS69 142 aa16.95■□□□□ 0.3
PCM1-202ENST00000327578 SPAG9O60271 1321 aaKnown RBP16.95■□□□□ 0.3
PCM1-202ENST00000327578 STK31Q9BXU1 1019 aa16.94■□□□□ 0.3
PCM1-202ENST00000327578 CCDC146Q8IYE0 955 aa16.94■□□□□ 0.3
PCM1-202ENST00000327578 HDGFL2Q7Z4V5 671 aaPredicted RBP16.93■□□□□ 0.3
PCM1-202ENST00000327578 STK26Q9P289 416 aa16.93■□□□□ 0.3
PCM1-202ENST00000327578 ROCK2O75116 1388 aaKnown RBP16.93■□□□□ 0.3
PCM1-202ENST00000327578 MCTP1Q6DN14 999 aa16.93■□□□□ 0.3
PCM1-202ENST00000327578 KANK1Q14678 1352 aa16.93■□□□□ 0.3
PCM1-202ENST00000327578 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.93■□□□□ 0.3
PCM1-202ENST00000327578 TMX4Q9H1E5 349 aaPredicted RBP16.93■□□□□ 0.3
PCM1-202ENST00000327578 PAK3O75914 559 aaPredicted RBP16.93■□□□□ 0.3
PCM1-202ENST00000327578 ATP6V1DQ9Y5K8 247 aa16.93■□□□□ 0.3
PCM1-202ENST00000327578 RALBP1Q15311 655 aa16.93■□□□□ 0.3
PCM1-202ENST00000327578 CCNB3Q8WWL7 1395 aa16.91■□□□□ 0.3
PCM1-202ENST00000327578 FAM161AQ3B820 660 aa16.91■□□□□ 0.3
PCM1-202ENST00000327578 FAM43AQ8N2R8 423 aa16.91■□□□□ 0.3
PCM1-202ENST00000327578 CENPJQ9HC77 1338 aaPredicted RBP16.9■□□□□ 0.3
PCM1-202ENST00000327578 IPO7O95373 1038 aaKnown RBP16.89■□□□□ 0.29
PCM1-202ENST00000327578 G3V3G9 751 aa16.89■□□□□ 0.29
PCM1-202ENST00000327578 DCAF8Q5TAQ9 597 aa16.89■□□□□ 0.29
PCM1-202ENST00000327578 CCDC9Q9Y3X0 531 aaKnown RBP16.89■□□□□ 0.29
PCM1-202ENST00000327578 EEA1Q15075 1411 aa16.89■□□□□ 0.29
PCM1-202ENST00000327578 PDE4AP27815 886 aa16.88■□□□□ 0.29
PCM1-202ENST00000327578 RDXP35241 583 aaKnown RBP16.88■□□□□ 0.29
PCM1-202ENST00000327578 AKAP17AQ02040 695 aaKnown RBP16.88■□□□□ 0.29
PCM1-202ENST00000327578 ANKRD45Q5TZF3 282 aa16.88■□□□□ 0.29
PCM1-202ENST00000327578 CENPQQ7L2Z9 268 aaPredicted RBP16.87■□□□□ 0.29
PCM1-202ENST00000327578 FBXW7Q969H0 707 aa16.87■□□□□ 0.29
PCM1-202ENST00000327578 ARGLU1Q9NWB6 273 aaPredicted RBP16.87■□□□□ 0.29
PCM1-202ENST00000327578 CEP164Q9UPV0 1460 aa16.87■□□□□ 0.29
PCM1-202ENST00000327578 CWC15Q9P013 229 aaKnown RBP16.86■□□□□ 0.29
PCM1-202ENST00000327578 ACBD3Q9H3P7 528 aa16.86■□□□□ 0.29
PCM1-202ENST00000327578 IFT57Q9NWB7 429 aa16.86■□□□□ 0.29
PCM1-202ENST00000327578 H0YHG0 523 aa16.85■□□□□ 0.29
PCM1-202ENST00000327578 FRAT2O75474 233 aaPredicted RBP16.85■□□□□ 0.29
PCM1-202ENST00000327578 NAP1L1P55209 391 aaKnown RBP16.85■□□□□ 0.29
PCM1-202ENST00000327578 SETD5Q9C0A6 1442 aa16.85■□□□□ 0.29
PCM1-202ENST00000327578 FOXD1Q16676 465 aa16.85■□□□□ 0.29
PCM1-202ENST00000327578 ANKRD20A12PQ8NF67 263 aa16.85■□□□□ 0.29
PCM1-202ENST00000327578 HDAC5Q9UQL6 1122 aa16.84■□□□□ 0.29
PCM1-202ENST00000327578 CCDC191Q8NCU4 936 aa16.84■□□□□ 0.29
PCM1-202ENST00000327578 R3HCC1Q9Y3T6 440 aaKnown RBP16.84■□□□□ 0.29
PCM1-202ENST00000327578 CDR1P51861 262 aa16.84■□□□□ 0.29
PCM1-202ENST00000327578 MNS1Q8NEH6 495 aa16.84■□□□□ 0.29
PCM1-202ENST00000327578 PKNOX2Q96KN3 472 aa16.84■□□□□ 0.29
PCM1-202ENST00000327578 HSP90B2PQ58FF3 399 aa16.83■□□□□ 0.29
PCM1-202ENST00000327578 HOOK1Q9UJC3 728 aaKnown RBP16.83■□□□□ 0.29
PCM1-202ENST00000327578 CSB-PGBD3P0DP91 1061 aa16.83■□□□□ 0.28
PCM1-202ENST00000327578 SASS6Q6UVJ0 657 aa16.82■□□□□ 0.28
PCM1-202ENST00000327578 PLCD4Q9BRC7 762 aa16.82■□□□□ 0.28
PCM1-202ENST00000327578 HDGFP51858 240 aaKnown RBP16.82■□□□□ 0.28
PCM1-202ENST00000327578 EIF4G1Q04637 1599 aaKnown RBP16.81■□□□□ 0.28
PCM1-202ENST00000327578 BICD2Q8TD16 824 aa16.81■□□□□ 0.28
PCM1-202ENST00000327578 TRIM29Q14134 588 aa16.81■□□□□ 0.28
PCM1-202ENST00000327578 CHMP4AQ9BY43 222 aa16.81■□□□□ 0.28
PCM1-202ENST00000327578 TCEAL9Q9UHQ7 104 aa16.8■□□□□ 0.28
PCM1-202ENST00000327578 TNIKQ9UKE5 1360 aa16.8■□□□□ 0.28
PCM1-202ENST00000327578 PLIN1O60240 522 aa16.79■□□□□ 0.28
PCM1-202ENST00000327578 SYNE3Q6ZMZ3 975 aa16.79■□□□□ 0.28
PCM1-202ENST00000327578 CCDC66A2RUB6 948 aa16.79■□□□□ 0.28
PCM1-202ENST00000327578 DIAPH3Q9NSV4 1193 aa16.79■□□□□ 0.28
PCM1-202ENST00000327578 CHMP4CQ96CF2 233 aa16.79■□□□□ 0.28
PCM1-202ENST00000327578 MTERF4Q7Z6M4 381 aaKnown RBP16.79■□□□□ 0.28
PCM1-202ENST00000327578 DCTN1Q14203 1278 aa16.78■□□□□ 0.28
PCM1-202ENST00000327578 SKIDA1Q1XH10 827 aa16.78■□□□□ 0.28
PCM1-202ENST00000327578 ARHGAP35Q9NRY4 1499 aa16.78■□□□□ 0.28
PCM1-202ENST00000327578 CCDC47Q96A33 483 aaKnown RBP16.77■□□□□ 0.28
PCM1-202ENST00000327578 CRBNQ96SW2 442 aa16.77■□□□□ 0.28
PCM1-202ENST00000327578 ANO2Q9NQ90 1003 aa16.76■□□□□ 0.27
PCM1-202ENST00000327578 HSP90AB3PQ58FF7 597 aa16.76■□□□□ 0.27
PCM1-202ENST00000327578 CAGE1Q8TC20 777 aa16.76■□□□□ 0.27
PCM1-202ENST00000327578 KIF27Q86VH2 1401 aa16.76■□□□□ 0.27
PCM1-202ENST00000327578 MLECQ14165 292 aa16.75■□□□□ 0.27
PCM1-202ENST00000327578 FANCIQ9NVI1 1328 aa16.75■□□□□ 0.27
PCM1-202ENST00000327578 PDE3BQ13370 1112 aa16.75■□□□□ 0.27
PCM1-202ENST00000327578 NASPP49321 788 aaPredicted RBP16.75■□□□□ 0.27
PCM1-202ENST00000327578 FOSBP53539 338 aa16.75■□□□□ 0.27
PCM1-202ENST00000327578 CCDC39Q9UFE4 941 aa16.75■□□□□ 0.27
PCM1-202ENST00000327578 EIF3AQ14152 1382 aaKnown RBP16.74■□□□□ 0.27
PCM1-202ENST00000327578 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
PCM1-202ENST00000327578 ODF2Q5BJF6 829 aa16.74■□□□□ 0.27
PCM1-202ENST00000327578 PHLDB1Q86UU1 1377 aa16.74■□□□□ 0.27
PCM1-202ENST00000327578 BCL2L13Q9BXK5 485 aa16.74■□□□□ 0.27
PCM1-202ENST00000327578 CHMP5Q9NZZ3 219 aa16.74■□□□□ 0.27
PCM1-202ENST00000327578 TTLL5Q6EMB2 1281 aa16.73■□□□□ 0.27
PCM1-202ENST00000327578 LEKR1Q6ZMV7 388 aa16.73■□□□□ 0.27
PCM1-202ENST00000327578 LMOD3Q0VAK6 560 aa16.73■□□□□ 0.27
PCM1-202ENST00000327578 RRP7AQ9Y3A4 280 aaKnown RBP16.73■□□□□ 0.27
PCM1-202ENST00000327578 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.73■□□□□ 0.272e-6■■■■■ 42.1
PCM1-202ENST00000327578 PODXL2Q9NZ53 605 aa16.73■□□□□ 0.27
PCM1-202ENST00000327578 CT47A1Q5JQC4 288 aaPredicted RBP16.73■□□□□ 0.27
PCM1-202ENST00000327578 PDILTQ8N807 584 aa16.73■□□□□ 0.27
PCM1-202ENST00000327578 HSP90AB2PQ58FF8 381 aa16.73■□□□□ 0.27
PCM1-202ENST00000327578 RAD21O60216 631 aa16.73■□□□□ 0.27
PCM1-202ENST00000327578 RBM10P98175 930 aaKnown RBP16.72■□□□□ 0.27
PCM1-202ENST00000327578 PKD2Q13563 968 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms