RNA–Protein interactions for RNA: ENST00000325438.12

PACS2-201, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACS2, Length 3,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-201ENST00000325438 POLA1P09884 1462 aaPredicted RBP30.7■■■□□ 2.51
PACS2-201ENST00000325438 PANK1Q8TE04 598 aa30.69■■■□□ 2.5
PACS2-201ENST00000325438 RRP7AQ9Y3A4 280 aaKnown RBP30.68■■■□□ 2.5
PACS2-201ENST00000325438 FAM43AQ8N2R8 423 aa30.67■■■□□ 2.5
PACS2-201ENST00000325438 DAPK1P53355 1430 aa30.67■■■□□ 2.5
PACS2-201ENST00000325438 KDM5BQ9UGL1 1544 aa30.65■■■□□ 2.5
PACS2-201ENST00000325438 MFAP1P55081 439 aaKnown RBP30.65■■■□□ 2.5
PACS2-201ENST00000325438 PKNOX2Q96KN3 472 aa30.64■■■□□ 2.5
PACS2-201ENST00000325438 KDM6BO15054 1643 aa30.64■■■□□ 2.5
PACS2-201ENST00000325438 C8orf34Q49A92 452 aa30.63■■■□□ 2.49
PACS2-201ENST00000325438 SPATA31E1Q6ZUB1 1445 aa30.63■■■□□ 2.49
PACS2-201ENST00000325438 NESP48681 1621 aa30.62■■■□□ 2.49
PACS2-201ENST00000325438 SNAPC4Q5SXM2 1469 aa30.62■■■□□ 2.49
PACS2-201ENST00000325438 GAPVD1Q14C86 1478 aa30.62■■■□□ 2.49
PACS2-201ENST00000325438 CHMP7Q8WUX9 453 aaPredicted RBP30.61■■■□□ 2.49
PACS2-201ENST00000325438 KIAA1107Q9UPP5 1409 aa30.6■■■□□ 2.49
PACS2-201ENST00000325438 ABCC5O15440 1437 aa30.6■■■□□ 2.49
PACS2-201ENST00000325438 HMGXB3Q12766 1538 aa30.59■■■□□ 2.49
PACS2-201ENST00000325438 HSP90AA2PQ14568 343 aaPredicted RBP30.59■■■□□ 2.49
PACS2-201ENST00000325438 FOXD4L1Q9NU39 408 aa30.59■■■□□ 2.49
PACS2-201ENST00000325438 CHGAP10645 457 aaKnown RBP30.58■■■□□ 2.49
PACS2-201ENST00000325438 ARID3AQ99856 593 aa30.57■■■□□ 2.48
PACS2-201ENST00000325438 PDS5BQ9NTI5 1447 aa30.56■■■□□ 2.48
PACS2-201ENST00000325438 DENND4BO75064 1496 aaPredicted RBP30.55■■■□□ 2.48
PACS2-201ENST00000325438 ANKRD50Q9ULJ7 1429 aa30.55■■■□□ 2.48
PACS2-201ENST00000325438 FTSJ3Q8IY81 847 aaKnown RBP30.55■■■□□ 2.48
PACS2-201ENST00000325438 CENPJQ9HC77 1338 aaPredicted RBP30.53■■■□□ 2.48
PACS2-201ENST00000325438 TEX14Q8IWB6 1497 aa30.53■■■□□ 2.48
PACS2-201ENST00000325438 EPRSP07814 1512 aaKnown RBP30.53■■■□□ 2.48
PACS2-201ENST00000325438 SEC24BO95487 1268 aa30.52■■■□□ 2.48
PACS2-201ENST00000325438 TOPBP1Q92547 1522 aa30.52■■■□□ 2.48
PACS2-201ENST00000325438 ANP32BQ92688 251 aaKnown RBP30.51■■■□□ 2.48
PACS2-201ENST00000325438 NCLP19338 710 aaKnown RBP30.51■■■□□ 2.47
PACS2-201ENST00000325438 LRPPRCP42704 1394 aaKnown RBP30.51■■■□□ 2.47
PACS2-201ENST00000325438 GRIN2BQ13224 1484 aa30.5■■■□□ 2.47
PACS2-201ENST00000325438 DUSP27Q5VZP5 1158 aa30.5■■■□□ 2.47
PACS2-201ENST00000325438 IGHDP01880 384 aa30.5■■■□□ 2.47
PACS2-201ENST00000325438 PPP2R1AP30153 589 aa30.5■■■□□ 2.47
PACS2-201ENST00000325438 UGGT2Q9NYU1 1516 aa30.49■■■□□ 2.47
PACS2-201ENST00000325438 MYH16Q9H6N6 1097 aa30.49■■■□□ 2.47
PACS2-201ENST00000325438 RRAGDQ9NQL2 400 aaPredicted RBP30.47■■■□□ 2.47
PACS2-201ENST00000325438 PRG4Q92954 1404 aaPredicted RBP30.47■■■□□ 2.47
PACS2-201ENST00000325438 ABCA10Q8WWZ4 1543 aa30.45■■■□□ 2.47
PACS2-201ENST00000325438 HSCBQ8IWL3 235 aa30.45■■■□□ 2.47
PACS2-201ENST00000325438 PANK2Q9BZ23 570 aa30.45■■■□□ 2.46
PACS2-201ENST00000325438 ZBTB7CA1YPR0 619 aa30.44■■■□□ 2.46
PACS2-201ENST00000325438 CCDC144AA2RUR9 1427 aa30.44■■■□□ 2.46
PACS2-201ENST00000325438 HSP90AB1P08238 724 aaKnown RBP30.43■■■□□ 2.46
PACS2-201ENST00000325438 MAPK8IP3Q9UPT6 1336 aa30.41■■■□□ 2.46
PACS2-201ENST00000325438 MAGI3Q5TCQ9 1506 aa30.41■■■□□ 2.46
PACS2-201ENST00000325438 ROCK1Q13464 1354 aa30.41■■■□□ 2.46
PACS2-201ENST00000325438 CDCA8Q53HL2 280 aa30.4■■■□□ 2.46
PACS2-201ENST00000325438 CGNL1Q0VF96 1302 aa30.38■■■□□ 2.45
PACS2-201ENST00000325438 E9PSI1 815 aa30.38■■■□□ 2.45
PACS2-201ENST00000325438 PER1O15534 1290 aaPredicted RBP30.36■■■□□ 2.45
PACS2-201ENST00000325438 KDM2BQ8NHM5 1336 aa30.36■■■□□ 2.45
PACS2-201ENST00000325438 THOC2Q8NI27 1593 aaKnown RBP30.36■■■□□ 2.45
PACS2-201ENST00000325438 TRAK2O60296 914 aa30.36■■■□□ 2.45
PACS2-201ENST00000325438 SLFN5Q08AF3 891 aa30.36■■■□□ 2.45
PACS2-201ENST00000325438 PRDM2Q13029 1718 aa30.36■■■□□ 2.45
PACS2-201ENST00000325438 RWDD1Q9H446 243 aaPredicted RBP30.35■■■□□ 2.45
PACS2-201ENST00000325438 SPINK5Q9NQ38 1064 aaPredicted RBP30.35■■■□□ 2.45
PACS2-201ENST00000325438 PMFBP1Q8TBY8 1022 aa30.34■■■□□ 2.45
PACS2-201ENST00000325438 PDZRN3Q9UPQ7 1066 aa30.34■■■□□ 2.45
PACS2-201ENST00000325438 HECW1Q76N89 1606 aa30.34■■■□□ 2.45
PACS2-201ENST00000325438 PLEKHH1Q9ULM0 1364 aa30.33■■■□□ 2.45
PACS2-201ENST00000325438 DISP3Q9P2K9 1392 aa30.33■■■□□ 2.45
PACS2-201ENST00000325438 TBC1D2Q9BYX2 928 aa30.32■■■□□ 2.44
PACS2-201ENST00000325438 TPRNQ4KMQ1 711 aa30.31■■■□□ 2.44
PACS2-201ENST00000325438 PARD3Q8TEW0 1356 aa30.3■■■□□ 2.44
PACS2-201ENST00000325438 XRCC6P12956 609 aaKnown RBP eCLIP30.3■■■□□ 2.44
PACS2-201ENST00000325438 MORC1Q86VD1 984 aa30.3■■■□□ 2.44
PACS2-201ENST00000325438 ITPRIPQ8IWB1 547 aa30.3■■■□□ 2.44
PACS2-201ENST00000325438 MCM4P33991 863 aa30.29■■■□□ 2.44
PACS2-201ENST00000325438 U2SURPO15042 1029 aaKnown RBP30.27■■■□□ 2.44
PACS2-201ENST00000325438 TCOF1Q13428 1488 aaKnown RBP30.27■■■□□ 2.44
PACS2-201ENST00000325438 C22orf23Q9BZE7 217 aa30.27■■■□□ 2.44
PACS2-201ENST00000325438 CHMP5Q9NZZ3 219 aa30.26■■■□□ 2.43
PACS2-201ENST00000325438 PZPP20742 1482 aa30.25■■■□□ 2.43
PACS2-201ENST00000325438 TNNQ9UQP3 1299 aa30.24■■■□□ 2.43
PACS2-201ENST00000325438 DNMBPQ6XZF7 1577 aa30.24■■■□□ 2.43
PACS2-201ENST00000325438 U2AF1L5P0DN76 240 aaPredicted RBP30.23■■■□□ 2.43
PACS2-201ENST00000325438 U2AF1Q01081 240 aaKnown RBP eCLIP30.23■■■□□ 2.43
PACS2-201ENST00000325438 BCORL1Q5H9F3 1711 aa30.21■■■□□ 2.43
PACS2-201ENST00000325438 GOLGA6L22H0YM25 854 aa30.21■■■□□ 2.43
PACS2-201ENST00000325438 SMC4Q9NTJ3 1288 aa30.21■■■□□ 2.43
PACS2-201ENST00000325438 DNAJC5BQ9UF47 199 aa30.2■■■□□ 2.43
PACS2-201ENST00000325438 ZMYND15Q9H091 742 aa30.2■■■□□ 2.42
PACS2-201ENST00000325438 DMRT2Q9Y5R5 561 aa30.19■■■□□ 2.42
PACS2-201ENST00000325438 ERBINQ96RT1 1412 aa30.18■■■□□ 2.42
PACS2-201ENST00000325438 MSNP26038 577 aaKnown RBP30.17■■■□□ 2.42
PACS2-201ENST00000325438 MRE11P49959 708 aa30.17■■■□□ 2.42
PACS2-201ENST00000325438 CUL7Q14999 1698 aa30.16■■■□□ 2.42
PACS2-201ENST00000325438 RALGAPBQ86X10 1494 aa30.16■■■□□ 2.42
PACS2-201ENST00000325438 CAMSAP2Q08AD1 1489 aa30.15■■■□□ 2.42
PACS2-201ENST00000325438 SAFB2Q14151 953 aaKnown RBP eCLIP30.15■■■□□ 2.42
PACS2-201ENST00000325438 CFAP53Q96M91 514 aa30.15■■■□□ 2.42
PACS2-201ENST00000325438 GBP4Q96PP9 640 aa30.14■■■□□ 2.42
PACS2-201ENST00000325438 TESK2Q96S53 571 aa30.14■■■□□ 2.42
PACS2-201ENST00000325438 PDE3AQ14432 1141 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms