RNA–Protein interactions for RNA: ENST00000323929.7

MRE11-201, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRE11, Length 6,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-201ENST00000323929 GOLGA6L22H0YM25 854 aa9.65□□□□□ -0.86
MRE11-201ENST00000323929 SOX12O15370 315 aa9.65□□□□□ -0.86
MRE11-201ENST00000323929 C9orf84Q5VXU9 1444 aa9.65□□□□□ -0.86
MRE11-201ENST00000323929 KIF14Q15058 1648 aa9.65□□□□□ -0.87
MRE11-201ENST00000323929 PCF11O94913 1555 aaKnown RBP9.65□□□□□ -0.87
MRE11-201ENST00000323929 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.65□□□□□ -0.87
MRE11-201ENST00000323929 URB2Q14146 1524 aaKnown RBP9.64□□□□□ -0.87
MRE11-201ENST00000323929 NUTM2DQ5VT03 806 aaPredicted RBP9.64□□□□□ -0.87
MRE11-201ENST00000323929 NGDNQ8NEJ9 315 aaKnown RBP9.64□□□□□ -0.87
MRE11-201ENST00000323929 CSB-PGBD3P0DP91 1061 aa9.64□□□□□ -0.87
MRE11-201ENST00000323929 PDE3BQ13370 1112 aa9.64□□□□□ -0.87
MRE11-201ENST00000323929 MAP3K1Q13233 1512 aa9.64□□□□□ -0.87
MRE11-201ENST00000323929 TRAK1Q9UPV9 953 aa9.64□□□□□ -0.87
MRE11-201ENST00000323929 EPRSP07814 1512 aaKnown RBP9.63□□□□□ -0.87
MRE11-201ENST00000323929 NPHP1O15259 732 aa9.63□□□□□ -0.87
MRE11-201ENST00000323929 CGNL1Q0VF96 1302 aa9.63□□□□□ -0.87
MRE11-201ENST00000323929 HFM1A2PYH4 1435 aa9.63□□□□□ -0.87
MRE11-201ENST00000323929 ZNF644Q9H582 1327 aaPredicted RBP9.63□□□□□ -0.87
MRE11-201ENST00000323929 DAPK1P53355 1430 aa9.62□□□□□ -0.87
MRE11-201ENST00000323929 SENP3-EIF4A1A0A087X0R7 540 aa9.62□□□□□ -0.87
MRE11-201ENST00000323929 ST20-MTHFSA0A0A6YYL1 179 aa9.61□□□□□ -0.87
MRE11-201ENST00000323929 RCAN3Q9UKA8 241 aa9.6□□□□□ -0.87
MRE11-201ENST00000323929 PANK3Q9H999 370 aa9.6□□□□□ -0.87
MRE11-201ENST00000323929 COG3Q96JB2 828 aa9.6□□□□□ -0.87
MRE11-201ENST00000323929 AMPHP49418 695 aa9.59□□□□□ -0.87
MRE11-201ENST00000323929 HDAC5Q9UQL6 1122 aa9.59□□□□□ -0.87
MRE11-201ENST00000323929 ROCK1Q13464 1354 aa9.59□□□□□ -0.87
MRE11-201ENST00000323929 GOLGA2Q08379 1002 aa9.59□□□□□ -0.87
MRE11-201ENST00000323929 KIAA1107Q9UPP5 1409 aa9.59□□□□□ -0.87
MRE11-201ENST00000323929 MCCP23508 829 aa9.59□□□□□ -0.87
MRE11-201ENST00000323929 CDK13Q14004 1512 aaKnown RBP9.59□□□□□ -0.87
MRE11-201ENST00000323929 STK31Q9BXU1 1019 aa9.58□□□□□ -0.88
MRE11-201ENST00000323929 THOC2Q8NI27 1593 aaKnown RBP9.58□□□□□ -0.88
MRE11-201ENST00000323929 PMFBP1Q8TBY8 1022 aa9.58□□□□□ -0.88
MRE11-201ENST00000323929 RWDD1Q9H446 243 aaPredicted RBP9.58□□□□□ -0.88
MRE11-201ENST00000323929 RGS3P49796 1198 aa9.58□□□□□ -0.88
MRE11-201ENST00000323929 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.57□□□□□ -0.88
MRE11-201ENST00000323929 CENPJQ9HC77 1338 aaPredicted RBP9.57□□□□□ -0.88
MRE11-201ENST00000323929 CCDC141Q6ZP82 1450 aa9.57□□□□□ -0.88
MRE11-201ENST00000323929 PTPN23Q9H3S7 1636 aa9.57□□□□□ -0.88
MRE11-201ENST00000323929 SCAPERQ9BY12 1400 aa9.56□□□□□ -0.88
MRE11-201ENST00000323929 NBR1Q14596 966 aa9.56□□□□□ -0.88
MRE11-201ENST00000323929 POGZQ7Z3K3 1410 aa9.56□□□□□ -0.88
MRE11-201ENST00000323929 CAMSAP2Q08AD1 1489 aa9.56□□□□□ -0.88
MRE11-201ENST00000323929 NGEFQ8N5V2 710 aa9.56□□□□□ -0.88
MRE11-201ENST00000323929 ITPRIPQ8IWB1 547 aa9.55□□□□□ -0.88
MRE11-201ENST00000323929 CNTLNQ9NXG0 1405 aa9.55□□□□□ -0.88
MRE11-201ENST00000323929 HSP90AB1P08238 724 aaKnown RBP9.55□□□□□ -0.88
MRE11-201ENST00000323929 MINK1Q8N4C8 1332 aaPredicted RBP9.55□□□□□ -0.88
MRE11-201ENST00000323929 CCDC7Q96M83 1385 aa9.54□□□□□ -0.88
MRE11-201ENST00000323929 KCNJ4P48050 445 aa9.54□□□□□ -0.88
MRE11-201ENST00000323929 SMC4Q9NTJ3 1288 aa9.54□□□□□ -0.88
MRE11-201ENST00000323929 CTTNBP2Q8WZ74 1663 aa9.54□□□□□ -0.88
MRE11-201ENST00000323929 ZRSR1Q15695 479 aaKnown RBP9.53□□□□□ -0.88
MRE11-201ENST00000323929 HSCBQ8IWL3 235 aa9.53□□□□□ -0.88
MRE11-201ENST00000323929 CCDC146Q8IYE0 955 aa9.53□□□□□ -0.88
MRE11-201ENST00000323929 B4GALNT3Q6L9W6 998 aa9.53□□□□□ -0.88
MRE11-201ENST00000323929 HMMRO75330 724 aa9.53□□□□□ -0.88
MRE11-201ENST00000323929 RPGRIP1LQ68CZ1 1315 aa9.53□□□□□ -0.88
MRE11-201ENST00000323929 GPATCH3Q96I76 525 aa9.52□□□□□ -0.88
MRE11-201ENST00000323929 AFAP1Q8N556 730 aa9.52□□□□□ -0.88
MRE11-201ENST00000323929 PRKRIP1Q9H875 184 aaPredicted RBP9.52□□□□□ -0.89
MRE11-201ENST00000323929 E9PSI1 815 aa9.52□□□□□ -0.89
MRE11-201ENST00000323929 ARHGEF11O15085 1522 aa9.52□□□□□ -0.89
MRE11-201ENST00000323929 C1orf141Q5JVX7 400 aa9.51□□□□□ -0.89
MRE11-201ENST00000323929 RAPGEF6Q8TEU7 1601 aa9.51□□□□□ -0.89
MRE11-201ENST00000323929 CCDC9Q9Y3X0 531 aaKnown RBP9.51□□□□□ -0.89
MRE11-201ENST00000323929 CDK11BP21127 795 aaKnown RBP9.51□□□□□ -0.89
MRE11-201ENST00000323929 FGD1P98174 961 aa9.51□□□□□ -0.89
MRE11-201ENST00000323929 ADAMTS12P58397 1594 aa9.5□□□□□ -0.89
MRE11-201ENST00000323929 TCERG1O14776 1098 aaKnown RBP9.5□□□□□ -0.89
MRE11-201ENST00000323929 DIAPH1O60610 1272 aaKnown RBP9.5□□□□□ -0.89
MRE11-201ENST00000323929 ZBED9Q6R2W3 1325 aa9.5□□□□□ -0.89
MRE11-201ENST00000323929 PLB1Q6P1J6 1458 aa9.5□□□□□ -0.89
MRE11-201ENST00000323929 ITSN2Q9NZM3 1697 aa9.49□□□□□ -0.89
MRE11-201ENST00000323929 ZNF608Q9ULD9 1512 aaPredicted RBP9.49□□□□□ -0.89
MRE11-201ENST00000323929 KIF7Q2M1P5 1343 aa9.49□□□□□ -0.89
MRE11-201ENST00000323929 CD109Q6YHK3 1445 aa9.49□□□□□ -0.89
MRE11-201ENST00000323929 NOP58Q9Y2X3 529 aaKnown RBP9.49□□□□□ -0.89
MRE11-201ENST00000323929 TMX4Q9H1E5 349 aaPredicted RBP9.49□□□□□ -0.89
MRE11-201ENST00000323929 SLC52A1Q9NWF4 448 aa9.49□□□□□ -0.89
MRE11-201ENST00000323929 ADGRL1O94910 1474 aa9.49□□□□□ -0.89
MRE11-201ENST00000323929 AKNAQ7Z591 1439 aa9.48□□□□□ -0.89
MRE11-201ENST00000323929 PTMSP20962 102 aa9.48□□□□□ -0.89
MRE11-201ENST00000323929 KIAA1211Q6ZU35 1233 aa9.48□□□□□ -0.89
MRE11-201ENST00000323929 WDR97A6NE52 1622 aa9.48□□□□□ -0.89
MRE11-201ENST00000323929 ERBINQ96RT1 1412 aa9.48□□□□□ -0.89
MRE11-201ENST00000323929 PSME1Q06323 249 aa9.48□□□□□ -0.89
MRE11-201ENST00000323929 NUTM2FA1L443 756 aa9.48□□□□□ -0.89
MRE11-201ENST00000323929 LTV1Q96GA3 475 aaPredicted RBP9.48□□□□□ -0.89
MRE11-201ENST00000323929 DNAJC5BQ9UF47 199 aa9.47□□□□□ -0.89
MRE11-201ENST00000323929 ATF3P18847 181 aa9.47□□□□□ -0.89
MRE11-201ENST00000323929 ANKRD30BQ9BXX2 1392 aa9.47□□□□□ -0.89
MRE11-201ENST00000323929 BRD4O60885 1362 aaPredicted RBP9.47□□□□□ -0.89
MRE11-201ENST00000323929 EVA1CP58658 441 aa9.47□□□□□ -0.89
MRE11-201ENST00000323929 RUNDC1Q96C34 613 aa9.46□□□□□ -0.89
MRE11-201ENST00000323929 ABCC5O15440 1437 aa9.46□□□□□ -0.89
MRE11-201ENST00000323929 FAM135AQ9P2D6 1515 aa9.46□□□□□ -0.89
MRE11-201ENST00000323929 KIF21AQ7Z4S6 1674 aa9.46□□□□□ -0.89
MRE11-201ENST00000323929 TRIM44Q96DX7 344 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms