RNA–Protein interactions for RNA: ENST00000320370.11

SSFA2-201, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSFA2, Length 4,965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-201ENST00000320370 GBP4Q96PP9 640 aa21.03■□□□□ 0.96
SSFA2-201ENST00000320370 SMC4Q9NTJ3 1288 aa21.03■□□□□ 0.96
SSFA2-201ENST00000320370 USP35Q9P2H5 1018 aa21.03■□□□□ 0.96
SSFA2-201ENST00000320370 TERF2IPQ9NYB0 399 aa21.02■□□□□ 0.96
SSFA2-201ENST00000320370 KCNJ4P48050 445 aa21■□□□□ 0.95
SSFA2-201ENST00000320370 RTF1Q92541 710 aaKnown RBP21■□□□□ 0.95
SSFA2-201ENST00000320370 GRIN2BQ13224 1484 aa21■□□□□ 0.95
SSFA2-201ENST00000320370 TOP2BQ02880 1626 aa21■□□□□ 0.95
SSFA2-201ENST00000320370 WASHC2AQ641Q2 1341 aa20.98■□□□□ 0.95
SSFA2-201ENST00000320370 FGD1P98174 961 aa20.98■□□□□ 0.95
SSFA2-201ENST00000320370 E9PSI1 815 aa20.97■□□□□ 0.95
SSFA2-201ENST00000320370 FAM161AQ3B820 660 aa20.97■□□□□ 0.95
SSFA2-201ENST00000320370 CLUAP1Q96AJ1 413 aa20.97■□□□□ 0.95
SSFA2-201ENST00000320370 TAOK2Q9UL54 1235 aa20.96■□□□□ 0.95
SSFA2-201ENST00000320370 APBB1O00213 710 aa20.96■□□□□ 0.95
SSFA2-201ENST00000320370 PLIN1O60240 522 aa20.96■□□□□ 0.95
SSFA2-201ENST00000320370 PLCB2Q00722 1185 aa20.96■□□□□ 0.95
SSFA2-201ENST00000320370 MFAP1P55081 439 aaKnown RBP20.96■□□□□ 0.95
SSFA2-201ENST00000320370 CRBNQ96SW2 442 aa20.95■□□□□ 0.94
SSFA2-201ENST00000320370 MSNP26038 577 aaKnown RBP20.94■□□□□ 0.94
SSFA2-201ENST00000320370 NUTM2DQ5VT03 806 aaPredicted RBP20.94■□□□□ 0.94
SSFA2-201ENST00000320370 ZNF644Q9H582 1327 aaPredicted RBP20.94■□□□□ 0.94
SSFA2-201ENST00000320370 MIA2Q96PC5 1412 aa20.94■□□□□ 0.94
SSFA2-201ENST00000320370 EFCAB5A4FU69 1503 aa20.94■□□□□ 0.94
SSFA2-201ENST00000320370 CDK11BP21127 795 aaKnown RBP20.94■□□□□ 0.94
SSFA2-201ENST00000320370 NGEFQ8N5V2 710 aa20.94■□□□□ 0.94
SSFA2-201ENST00000320370 CGNL1Q0VF96 1302 aa20.93■□□□□ 0.94
SSFA2-201ENST00000320370 TRAK1Q9UPV9 953 aa20.92■□□□□ 0.94
SSFA2-201ENST00000320370 OSCARQ8IYS5 282 aa20.91■□□□□ 0.94
SSFA2-201ENST00000320370 GZF1Q9H116 711 aaPredicted RBP20.9■□□□□ 0.94
SSFA2-201ENST00000320370 ANKRD50Q9ULJ7 1429 aa20.9■□□□□ 0.94
SSFA2-201ENST00000320370 PAK3O75914 559 aaPredicted RBP20.9■□□□□ 0.94
SSFA2-201ENST00000320370 NAP1L2Q9ULW6 460 aaPredicted RBP20.9■□□□□ 0.94
SSFA2-201ENST00000320370 TIAM1Q13009 1591 aa20.9■□□□□ 0.94
SSFA2-201ENST00000320370 GOLGA6L4A6NEF3 574 aa20.89■□□□□ 0.94
SSFA2-201ENST00000320370 NESP48681 1621 aa20.89■□□□□ 0.94
SSFA2-201ENST00000320370 TOPBP1Q92547 1522 aa20.89■□□□□ 0.93
SSFA2-201ENST00000320370 LMOD3Q0VAK6 560 aa20.89■□□□□ 0.93
SSFA2-201ENST00000320370 GOLGA6L3A6NEY3 463 aa20.88■□□□□ 0.93
SSFA2-201ENST00000320370 CC2D2AQ9P2K1 1620 aa20.88■□□□□ 0.93
SSFA2-201ENST00000320370 RRP7AQ9Y3A4 280 aaKnown RBP20.87■□□□□ 0.93
SSFA2-201ENST00000320370 EID1Q9Y6B2 187 aa20.87■□□□□ 0.93
SSFA2-201ENST00000320370 BRD4O60885 1362 aaPredicted RBP20.87■□□□□ 0.93
SSFA2-201ENST00000320370 VGFO15240 615 aaPredicted RBP20.87■□□□□ 0.93
SSFA2-201ENST00000320370 STAC3Q96MF2 364 aa20.87■□□□□ 0.93
SSFA2-201ENST00000320370 HFM1A2PYH4 1435 aa20.87■□□□□ 0.93
SSFA2-201ENST00000320370 NPHP1O15259 732 aa20.87■□□□□ 0.93
SSFA2-201ENST00000320370 MRC2Q9UBG0 1479 aa20.86■□□□□ 0.93
SSFA2-201ENST00000320370 GOLGA6L6A8MZA4 724 aa20.86■□□□□ 0.93
SSFA2-201ENST00000320370 APAF1O14727 1248 aa20.86■□□□□ 0.93
SSFA2-201ENST00000320370 POLA1P09884 1462 aaPredicted RBP20.86■□□□□ 0.93
SSFA2-201ENST00000320370 PRDM2Q13029 1718 aa20.85■□□□□ 0.93
SSFA2-201ENST00000320370 HMMRO75330 724 aa20.85■□□□□ 0.93
SSFA2-201ENST00000320370 KIAA1211Q6ZU35 1233 aa20.85■□□□□ 0.93
SSFA2-201ENST00000320370 CHMP4AQ9BY43 222 aa20.84■□□□□ 0.93
SSFA2-201ENST00000320370 ZKSCAN2Q63HK3 967 aa20.84■□□□□ 0.93
SSFA2-201ENST00000320370 EHBP1L1Q8N3D4 1523 aa20.83■□□□□ 0.93
SSFA2-201ENST00000320370 STK31Q9BXU1 1019 aa20.83■□□□□ 0.93
SSFA2-201ENST00000320370 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.83■□□□□ 0.92
SSFA2-201ENST00000320370 IFT140Q96RY7 1462 aa20.83■□□□□ 0.92
SSFA2-201ENST00000320370 EVC2Q86UK5 1308 aa20.82■□□□□ 0.92
SSFA2-201ENST00000320370 NRDCO43847 1150 aa20.82■□□□□ 0.92
SSFA2-201ENST00000320370 CHAF1AQ13111 956 aaPredicted RBP20.81■□□□□ 0.92
SSFA2-201ENST00000320370 COG6Q9Y2V7 657 aa20.81■□□□□ 0.92
SSFA2-201ENST00000320370 BCL2L13Q9BXK5 485 aa20.79■□□□□ 0.92
SSFA2-201ENST00000320370 GSE1Q14687 1217 aa20.79■□□□□ 0.92
SSFA2-201ENST00000320370 CYB5RLQ6IPT4 315 aa20.78■□□□□ 0.92
SSFA2-201ENST00000320370 SYAP1Q96A49 352 aaPredicted RBP20.78■□□□□ 0.92
SSFA2-201ENST00000320370 SLC4A3P48751 1232 aa20.78■□□□□ 0.92
SSFA2-201ENST00000320370 DNMBPQ6XZF7 1577 aa20.78■□□□□ 0.92
SSFA2-201ENST00000320370 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.77■□□□□ 0.92
SSFA2-201ENST00000320370 SYNJ2O15056 1496 aa20.77■□□□□ 0.92
SSFA2-201ENST00000320370 NUTM2FA1L443 756 aa20.76■□□□□ 0.91
SSFA2-201ENST00000320370 DDX11L8A8MPP1 907 aa20.76■□□□□ 0.91
SSFA2-201ENST00000320370 WDR97A6NE52 1622 aa20.76■□□□□ 0.91
SSFA2-201ENST00000320370 BICRAQ9NZM4 1560 aa20.75■□□□□ 0.91
SSFA2-201ENST00000320370 CSB-PGBD3P0DP91 1061 aa20.75■□□□□ 0.91
SSFA2-201ENST00000320370 NGDNQ8NEJ9 315 aaKnown RBP20.74■□□□□ 0.91
SSFA2-201ENST00000320370 HDAC5Q9UQL6 1122 aa20.73■□□□□ 0.91
SSFA2-201ENST00000320370 DDX19BQ9UMR2 479 aa20.72■□□□□ 0.91
SSFA2-201ENST00000320370 ST18O60284 1047 aa20.72■□□□□ 0.91
SSFA2-201ENST00000320370 PRG4Q92954 1404 aaPredicted RBP20.72■□□□□ 0.91
SSFA2-201ENST00000320370 KIAA1107Q9UPP5 1409 aa20.72■□□□□ 0.91
SSFA2-201ENST00000320370 NBPF8Q3BBV2 869 aa20.72■□□□□ 0.91
SSFA2-201ENST00000320370 RUNDC1Q96C34 613 aa20.72■□□□□ 0.91
SSFA2-201ENST00000320370 AAMPQ13685 434 aa20.71■□□□□ 0.91
SSFA2-201ENST00000320370 KIAA2012Q0VF49 1180 aa20.71■□□□□ 0.91
SSFA2-201ENST00000320370 ZNF330Q9Y3S2 320 aaPredicted RBP20.71■□□□□ 0.91
SSFA2-201ENST00000320370 TRIM6-TRIM34B2RNG4 842 aa20.7■□□□□ 0.9
SSFA2-201ENST00000320370 SLC4A10Q6U841 1118 aa20.7■□□□□ 0.9
SSFA2-201ENST00000320370 TULP1O00294 542 aaPredicted RBP20.69■□□□□ 0.9
SSFA2-201ENST00000320370 DRC7Q8IY82 874 aa20.69■□□□□ 0.9
SSFA2-201ENST00000320370 ANKRD45Q5TZF3 282 aa20.69■□□□□ 0.9
SSFA2-201ENST00000320370 DZIP1LQ8IYY4 767 aaKnown RBP20.69■□□□□ 0.9
SSFA2-201ENST00000320370 ARHGAP5Q13017 1502 aa20.68■□□□□ 0.9
SSFA2-201ENST00000320370 AMPHP49418 695 aa20.68■□□□□ 0.9
SSFA2-201ENST00000320370 FOXD4L1Q9NU39 408 aa20.68■□□□□ 0.9
SSFA2-201ENST00000320370 TROQ12816 1431 aaPredicted RBP20.67■□□□□ 0.9
SSFA2-201ENST00000320370 GPATCH3Q96I76 525 aa20.67■□□□□ 0.9
SSFA2-201ENST00000320370 ADAMTS8Q9UP79 889 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms