RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 CCDC7Q96M83 1385 aa9.08□□□□□ -0.96
SOX6-201ENST00000316399 KIAA2012Q0VF49 1180 aa9.07□□□□□ -0.96
SOX6-201ENST00000316399 PTPRGP23470 1445 aa9.07□□□□□ -0.96
SOX6-201ENST00000316399 DNMBPQ6XZF7 1577 aa9.07□□□□□ -0.96
SOX6-201ENST00000316399 THOC2Q8NI27 1593 aaKnown RBP9.06□□□□□ -0.96
SOX6-201ENST00000316399 U2SURPO15042 1029 aaKnown RBP9.06□□□□□ -0.96
SOX6-201ENST00000316399 GPATCH3Q96I76 525 aa9.06□□□□□ -0.96
SOX6-201ENST00000316399 SUPT6HQ7KZ85 1726 aaKnown RBP9.06□□□□□ -0.96
SOX6-201ENST00000316399 AKNAQ7Z591 1439 aa9.06□□□□□ -0.96
SOX6-201ENST00000316399 ANKRD50Q9ULJ7 1429 aa9.06□□□□□ -0.96
SOX6-201ENST00000316399 FAM161AQ3B820 660 aa9.06□□□□□ -0.96
SOX6-201ENST00000316399 KIF3AQ9Y496 699 aa9.06□□□□□ -0.96
SOX6-201ENST00000316399 NAP1L5Q96NT1 182 aaPredicted RBP9.06□□□□□ -0.96
SOX6-201ENST00000316399 SRPK2P78362 688 aaKnown RBP9.06□□□□□ -0.96
SOX6-201ENST00000316399 DNTTIP2Q5QJE6 756 aaKnown RBP9.06□□□□□ -0.96
SOX6-201ENST00000316399 ATP6V1DQ9Y5K8 247 aa9.06□□□□□ -0.96
SOX6-201ENST00000316399 ARAP1Q96P48 1450 aa9.06□□□□□ -0.96
SOX6-201ENST00000316399 IFT140Q96RY7 1462 aa9.05□□□□□ -0.96
SOX6-201ENST00000316399 RUSC2Q8N2Y8 1516 aa9.05□□□□□ -0.96
SOX6-201ENST00000316399 GOLGA6L3A6NEY3 463 aa9.05□□□□□ -0.96
SOX6-201ENST00000316399 RTF1Q92541 710 aaKnown RBP9.05□□□□□ -0.96
SOX6-201ENST00000316399 OS9Q13438 667 aaPredicted RBP9.05□□□□□ -0.96
SOX6-201ENST00000316399 KIAA1211Q6ZU35 1233 aa9.05□□□□□ -0.96
SOX6-201ENST00000316399 RSPH6AQ9H0K4 717 aa9.05□□□□□ -0.96
SOX6-201ENST00000316399 RRP1P56182 461 aaKnown RBP9.05□□□□□ -0.96
SOX6-201ENST00000316399 STK31Q9BXU1 1019 aa9.04□□□□□ -0.96
SOX6-201ENST00000316399 NEUROD2Q15784 382 aa9.04□□□□□ -0.96
SOX6-201ENST00000316399 SYNJ2O15056 1496 aa9.03□□□□□ -0.96
SOX6-201ENST00000316399 U2AF1L5P0DN76 240 aaPredicted RBP9.03□□□□□ -0.96
SOX6-201ENST00000316399 U2AF1Q01081 240 aaKnown RBP eCLIP9.03□□□□□ -0.96
SOX6-201ENST00000316399 ABCA10Q8WWZ4 1543 aa9.03□□□□□ -0.96
SOX6-201ENST00000316399 ST18O60284 1047 aa9.03□□□□□ -0.96
SOX6-201ENST00000316399 EVC2Q86UK5 1308 aa9.03□□□□□ -0.96
SOX6-201ENST00000316399 CC2D2AQ9P2K1 1620 aa9.03□□□□□ -0.96
SOX6-201ENST00000316399 KCNJ4P48050 445 aa9.03□□□□□ -0.96
SOX6-201ENST00000316399 C14orf37Q86TY3 774 aa9.03□□□□□ -0.96
SOX6-201ENST00000316399 ITPRIPQ8IWB1 547 aa9.03□□□□□ -0.96
SOX6-201ENST00000316399 FGD1P98174 961 aa9.03□□□□□ -0.96
SOX6-201ENST00000316399 VGFO15240 615 aaPredicted RBP9.03□□□□□ -0.96
SOX6-201ENST00000316399 ISY1Q9ULR0 285 aaKnown RBP9.03□□□□□ -0.96
SOX6-201ENST00000316399 KIF16BQ96L93 1317 aa9.02□□□□□ -0.97
SOX6-201ENST00000316399 CCDC141Q6ZP82 1450 aa9.02□□□□□ -0.97
SOX6-201ENST00000316399 CT47B1P0C2W7 299 aaPredicted RBP9.02□□□□□ -0.97
SOX6-201ENST00000316399 DAPK1P53355 1430 aa9.02□□□□□ -0.97
SOX6-201ENST00000316399 DDX19BQ9UMR2 479 aa9.01□□□□□ -0.97
SOX6-201ENST00000316399 ZKSCAN2Q63HK3 967 aa9.01□□□□□ -0.97
SOX6-201ENST00000316399 MRC2Q9UBG0 1479 aa9.01□□□□□ -0.97
SOX6-201ENST00000316399 ARXQ96QS3 562 aa9□□□□□ -0.97
SOX6-201ENST00000316399 TPM4P67936 248 aa9□□□□□ -0.97
SOX6-201ENST00000316399 WWC1Q8IX03 1113 aa9□□□□□ -0.97
SOX6-201ENST00000316399 SMC4Q9NTJ3 1288 aa9□□□□□ -0.97
SOX6-201ENST00000316399 TROQ12816 1431 aaPredicted RBP8.99□□□□□ -0.97
SOX6-201ENST00000316399 KIAA1107Q9UPP5 1409 aa8.99□□□□□ -0.97
SOX6-201ENST00000316399 REC8O95072 547 aa8.99□□□□□ -0.97
SOX6-201ENST00000316399 KIF7Q2M1P5 1343 aa8.99□□□□□ -0.97
SOX6-201ENST00000316399 JPH4Q96JJ6 628 aa8.98□□□□□ -0.97
SOX6-201ENST00000316399 ST20-MTHFSA0A0A6YYL1 179 aa8.98□□□□□ -0.97
SOX6-201ENST00000316399 PDE4AP27815 886 aa8.98□□□□□ -0.97
SOX6-201ENST00000316399 TOPBP1Q92547 1522 aa8.97□□□□□ -0.97
SOX6-201ENST00000316399 IL27Q8NEV9 243 aa8.97□□□□□ -0.97
SOX6-201ENST00000316399 SMG6Q86US8 1419 aaKnown RBP8.97□□□□□ -0.97
SOX6-201ENST00000316399 API5Q9BZZ5 524 aaKnown RBP8.97□□□□□ -0.97
SOX6-201ENST00000316399 BIVM-ERCC5R4GMW8 1640 aa8.97□□□□□ -0.97
SOX6-201ENST00000316399 GSE1Q14687 1217 aa8.96□□□□□ -0.97
SOX6-201ENST00000316399 KIF3BO15066 747 aa8.96□□□□□ -0.98
SOX6-201ENST00000316399 LRRFIP1Q32MZ4 808 aaKnown RBP8.96□□□□□ -0.98
SOX6-201ENST00000316399 KIAA0586Q9BVV6 1533 aa8.95□□□□□ -0.98
SOX6-201ENST00000316399 POLA1P09884 1462 aaPredicted RBP8.95□□□□□ -0.98
SOX6-201ENST00000316399 C9orf84Q5VXU9 1444 aa8.95□□□□□ -0.98
SOX6-201ENST00000316399 LAMC3Q9Y6N6 1575 aa8.94□□□□□ -0.98
SOX6-201ENST00000316399 RAD54L2Q9Y4B4 1467 aa8.94□□□□□ -0.98
SOX6-201ENST00000316399 PANK3Q9H999 370 aa8.94□□□□□ -0.98
SOX6-201ENST00000316399 FOXD1Q16676 465 aa8.94□□□□□ -0.98
SOX6-201ENST00000316399 DHX8Q14562 1220 aaKnown RBP8.94□□□□□ -0.98
SOX6-201ENST00000316399 ZNF428Q96B54 188 aa8.94□□□□□ -0.98
SOX6-201ENST00000316399 EID1Q9Y6B2 187 aa8.94□□□□□ -0.98
SOX6-201ENST00000316399 IQGAP2Q13576 1575 aa8.94□□□□□ -0.98
SOX6-201ENST00000316399 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.94□□□□□ -0.98
SOX6-201ENST00000316399 MTERF4Q7Z6M4 381 aaKnown RBP8.93□□□□□ -0.98
SOX6-201ENST00000316399 PDIA4P13667 645 aaKnown RBP8.92□□□□□ -0.98
SOX6-201ENST00000316399 RUNDC1Q96C34 613 aa8.92□□□□□ -0.98
SOX6-201ENST00000316399 ANKRD30BQ9BXX2 1392 aa8.92□□□□□ -0.98
SOX6-201ENST00000316399 TPM3P06753 285 aa8.92□□□□□ -0.98
SOX6-201ENST00000316399 HSP90AB4PQ58FF6 505 aa8.92□□□□□ -0.98
SOX6-201ENST00000316399 RPGRIP1LQ68CZ1 1315 aa8.92□□□□□ -0.98
SOX6-201ENST00000316399 GNAI1P63096 354 aa8.92□□□□□ -0.98
SOX6-201ENST00000316399 GNL2Q13823 731 aaKnown RBP8.92□□□□□ -0.98
SOX6-201ENST00000316399 PDE3AQ14432 1141 aa8.91□□□□□ -0.98
SOX6-201ENST00000316399 EPRSP07814 1512 aaKnown RBP8.91□□□□□ -0.98
SOX6-201ENST00000316399 RUFY2Q8WXA3 655 aa8.91□□□□□ -0.98
SOX6-201ENST00000316399 GGT6Q6P531 493 aa8.91□□□□□ -0.98
SOX6-201ENST00000316399 HNRNPMP52272 730 aaKnown RBP eCLIP8.91□□□□□ -0.98
SOX6-201ENST00000316399 DZIP1LQ8IYY4 767 aaKnown RBP8.91□□□□□ -0.98
SOX6-201ENST00000316399 ARHGAP5Q13017 1502 aa8.91□□□□□ -0.98
SOX6-201ENST00000316399 CHMP5Q9NZZ3 219 aa8.91□□□□□ -0.98
SOX6-201ENST00000316399 NUCB2P80303 420 aa8.91□□□□□ -0.98
SOX6-201ENST00000316399 MFAP1P55081 439 aaKnown RBP8.91□□□□□ -0.98
SOX6-201ENST00000316399 DRC7Q8IY82 874 aa8.91□□□□□ -0.98
SOX6-201ENST00000316399 COG3Q96JB2 828 aa8.9□□□□□ -0.98
SOX6-201ENST00000316399 SLKQ9H2G2 1235 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms