RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 WASHC2CQ9Y4E1 1318 aa21.81■■□□□ 1.08
GABRB3-202ENST00000311550 AQRO60306 1485 aaKnown RBP eCLIP21.81■■□□□ 1.08
GABRB3-202ENST00000311550 FANCIQ9NVI1 1328 aa21.81■■□□□ 1.08
GABRB3-202ENST00000311550 CFTRP13569 1480 aa21.8■■□□□ 1.08
GABRB3-202ENST00000311550 RTF1Q92541 710 aaKnown RBP21.8■■□□□ 1.08
GABRB3-202ENST00000311550 APAF1O14727 1248 aa21.79■■□□□ 1.08
GABRB3-202ENST00000311550 HAP1P54257 671 aaPredicted RBP21.79■■□□□ 1.08
GABRB3-202ENST00000311550 TOP2BQ02880 1626 aa21.79■■□□□ 1.08
GABRB3-202ENST00000311550 KCNJ4P48050 445 aa21.79■■□□□ 1.08
GABRB3-202ENST00000311550 FYCO1Q9BQS8 1478 aa21.78■■□□□ 1.08
GABRB3-202ENST00000311550 TAOK2Q9UL54 1235 aa21.78■■□□□ 1.08
GABRB3-202ENST00000311550 CENPQQ7L2Z9 268 aaPredicted RBP21.77■■□□□ 1.08
GABRB3-202ENST00000311550 HDGFP51858 240 aaKnown RBP21.77■■□□□ 1.08
GABRB3-202ENST00000311550 TERF2IPQ9NYB0 399 aa21.77■■□□□ 1.08
GABRB3-202ENST00000311550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.75■■□□□ 1.07
GABRB3-202ENST00000311550 COG6Q9Y2V7 657 aa21.75■■□□□ 1.07
GABRB3-202ENST00000311550 CALD1Q05682 793 aaKnown RBP21.74■■□□□ 1.07
GABRB3-202ENST00000311550 FAM161AQ3B820 660 aa21.73■■□□□ 1.07
GABRB3-202ENST00000311550 ANKRD50Q9ULJ7 1429 aa21.73■■□□□ 1.07
GABRB3-202ENST00000311550 ZRSR1Q15695 479 aaKnown RBP21.73■■□□□ 1.07
GABRB3-202ENST00000311550 NBPF8Q3BBV2 869 aa21.72■■□□□ 1.07
GABRB3-202ENST00000311550 E9PSI1 815 aa21.71■■□□□ 1.07
GABRB3-202ENST00000311550 FGD1P98174 961 aa21.71■■□□□ 1.07
GABRB3-202ENST00000311550 PRDM2Q13029 1718 aa21.71■■□□□ 1.07
GABRB3-202ENST00000311550 MCCP23508 829 aa21.7■■□□□ 1.07
GABRB3-202ENST00000311550 WDR97A6NE52 1622 aa21.7■■□□□ 1.06
GABRB3-202ENST00000311550 FOXD4L1Q9NU39 408 aa21.7■■□□□ 1.06
GABRB3-202ENST00000311550 TIAM1Q13009 1591 aa21.7■■□□□ 1.06
GABRB3-202ENST00000311550 GBP4Q96PP9 640 aa21.69■■□□□ 1.06
GABRB3-202ENST00000311550 NAP1L2Q9ULW6 460 aaPredicted RBP21.68■■□□□ 1.06
GABRB3-202ENST00000311550 ELL2O00472 640 aaPredicted RBP21.68■■□□□ 1.06
GABRB3-202ENST00000311550 CCDC184Q52MB2 194 aa21.68■■□□□ 1.06
GABRB3-202ENST00000311550 PAK3O75914 559 aaPredicted RBP21.67■■□□□ 1.06
GABRB3-202ENST00000311550 NESP48681 1621 aa21.67■■□□□ 1.06
GABRB3-202ENST00000311550 NUTM2FA1L443 756 aa21.67■■□□□ 1.06
GABRB3-202ENST00000311550 CDCA7LQ96GN5 454 aa21.65■■□□□ 1.06
GABRB3-202ENST00000311550 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.65■■□□□ 1.06
GABRB3-202ENST00000311550 CFAP44Q96MT7 982 aa21.64■■□□□ 1.06
GABRB3-202ENST00000311550 HFM1A2PYH4 1435 aa21.64■■□□□ 1.05
GABRB3-202ENST00000311550 SLC4A10Q6U841 1118 aa21.64■■□□□ 1.05
GABRB3-202ENST00000311550 CGNL1Q0VF96 1302 aa21.64■■□□□ 1.05
GABRB3-202ENST00000311550 MSNP26038 577 aaKnown RBP21.63■■□□□ 1.05
GABRB3-202ENST00000311550 GOLGA6L4A6NEF3 574 aa21.61■■□□□ 1.05
GABRB3-202ENST00000311550 GOLGA6L3A6NEY3 463 aa21.61■■□□□ 1.05
GABRB3-202ENST00000311550 ZKSCAN2Q63HK3 967 aa21.61■■□□□ 1.05
GABRB3-202ENST00000311550 ADAMTS8Q9UP79 889 aa21.6■■□□□ 1.05
GABRB3-202ENST00000311550 USP35Q9P2H5 1018 aa21.6■■□□□ 1.05
GABRB3-202ENST00000311550 MINK1Q8N4C8 1332 aaPredicted RBP21.6■■□□□ 1.05
GABRB3-202ENST00000311550 NBPF1Q3BBV0 1214 aa21.59■■□□□ 1.05
GABRB3-202ENST00000311550 STK31Q9BXU1 1019 aa21.59■■□□□ 1.05
GABRB3-202ENST00000311550 EFCAB5A4FU69 1503 aa21.59■■□□□ 1.05
GABRB3-202ENST00000311550 EVC2Q86UK5 1308 aa21.59■■□□□ 1.05
GABRB3-202ENST00000311550 BRD4O60885 1362 aaPredicted RBP21.58■■□□□ 1.05
GABRB3-202ENST00000311550 MIA2Q96PC5 1412 aa21.58■■□□□ 1.05
GABRB3-202ENST00000311550 AKNAQ7Z591 1439 aa21.57■■□□□ 1.04
GABRB3-202ENST00000311550 KIAA1211Q6ZU35 1233 aa21.57■■□□□ 1.04
GABRB3-202ENST00000311550 POLA1P09884 1462 aaPredicted RBP21.57■■□□□ 1.04
GABRB3-202ENST00000311550 VGFO15240 615 aaPredicted RBP21.56■■□□□ 1.04
GABRB3-202ENST00000311550 NOL8Q76FK4 1167 aaKnown RBP21.56■■□□□ 1.04
GABRB3-202ENST00000311550 TRIM6-TRIM34B2RNG4 842 aa21.56■■□□□ 1.04
GABRB3-202ENST00000311550 ANKRD45Q5TZF3 282 aa21.55■■□□□ 1.04
GABRB3-202ENST00000311550 EHBP1L1Q8N3D4 1523 aa21.55■■□□□ 1.04
GABRB3-202ENST00000311550 TOPBP1Q92547 1522 aa21.54■■□□□ 1.04
GABRB3-202ENST00000311550 GSE1Q14687 1217 aa21.54■■□□□ 1.04
GABRB3-202ENST00000311550 GRIN2BQ13224 1484 aa21.53■■□□□ 1.04
GABRB3-202ENST00000311550 LMOD3Q0VAK6 560 aa21.53■■□□□ 1.04
GABRB3-202ENST00000311550 HMMRO75330 724 aa21.52■■□□□ 1.04
GABRB3-202ENST00000311550 LTV1Q96GA3 475 aaPredicted RBP21.52■■□□□ 1.04
GABRB3-202ENST00000311550 PRG4Q92954 1404 aaPredicted RBP21.52■■□□□ 1.03
GABRB3-202ENST00000311550 PANK1Q8TE04 598 aa21.51■■□□□ 1.03
GABRB3-202ENST00000311550 NGDNQ8NEJ9 315 aaKnown RBP21.51■■□□□ 1.03
GABRB3-202ENST00000311550 NAIPQ13075 1403 aa21.51■■□□□ 1.03
GABRB3-202ENST00000311550 TRHP20396 242 aaPredicted RBP21.5■■□□□ 1.03
GABRB3-202ENST00000311550 PTMSP20962 102 aa21.5■■□□□ 1.03
GABRB3-202ENST00000311550 PNISRQ8TF01 805 aaKnown RBP21.5■■□□□ 1.03
GABRB3-202ENST00000311550 HMGXB3Q12766 1538 aa21.5■■□□□ 1.03
GABRB3-202ENST00000311550 KIAA1107Q9UPP5 1409 aa21.49■■□□□ 1.03
GABRB3-202ENST00000311550 AMPHP49418 695 aa21.49■■□□□ 1.03
GABRB3-202ENST00000311550 RUNDC1Q96C34 613 aa21.49■■□□□ 1.03
GABRB3-202ENST00000311550 AFAP1Q8N556 730 aa21.49■■□□□ 1.03
GABRB3-202ENST00000311550 FOXD4L5Q5VV16 416 aaPredicted RBP21.49■■□□□ 1.03
GABRB3-202ENST00000311550 FOXD4L4Q8WXT5 416 aaPredicted RBP21.49■■□□□ 1.03
GABRB3-202ENST00000311550 DZIP1LQ8IYY4 767 aaKnown RBP21.48■■□□□ 1.03
GABRB3-202ENST00000311550 TMEM132EQ6IEE7 984 aa21.48■■□□□ 1.03
GABRB3-202ENST00000311550 RIPK4P57078 832 aa21.48■■□□□ 1.03
GABRB3-202ENST00000311550 CFAP70Q5T0N1 1121 aa21.47■■□□□ 1.03
GABRB3-202ENST00000311550 PPP2R1AP30153 589 aa21.47■■□□□ 1.03
GABRB3-202ENST00000311550 DIAPH1O60610 1272 aaKnown RBP21.46■■□□□ 1.03
GABRB3-202ENST00000311550 PCF11O94913 1555 aaKnown RBP21.45■■□□□ 1.03
GABRB3-202ENST00000311550 DRC7Q8IY82 874 aa21.45■■□□□ 1.02
GABRB3-202ENST00000311550 C11orf95C9JLR9 678 aaPredicted RBP21.45■■□□□ 1.02
GABRB3-202ENST00000311550 COG3Q96JB2 828 aa21.45■■□□□ 1.02
GABRB3-202ENST00000311550 DDX19BQ9UMR2 479 aa21.44■■□□□ 1.02
GABRB3-202ENST00000311550 DAPK1P53355 1430 aa21.44■■□□□ 1.02
GABRB3-202ENST00000311550 GGNBP2Q9H3C7 697 aa21.44■■□□□ 1.02
GABRB3-202ENST00000311550 C9orf84Q5VXU9 1444 aa21.44■■□□□ 1.02
GABRB3-202ENST00000311550 NGEFQ8N5V2 710 aa21.43■■□□□ 1.02
GABRB3-202ENST00000311550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.43■■□□□ 1.02
GABRB3-202ENST00000311550 CDK13Q14004 1512 aaKnown RBP21.42■■□□□ 1.02
GABRB3-202ENST00000311550 ARHGAP5Q13017 1502 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms