RNA–Protein interactions for RNA: ENST00000309755.8

KLHL3-201, Transcript of kelch like family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL3, Length 6,806 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-201ENST00000309755 CRBNQ96SW2 442 aa13.72□□□□□ -0.21
KLHL3-201ENST00000309755 L3MBTL2Q969R5 705 aa13.72□□□□□ -0.21
KLHL3-201ENST00000309755 RRP7AQ9Y3A4 280 aaKnown RBP13.72□□□□□ -0.21
KLHL3-201ENST00000309755 SF3A1Q15459 793 aaKnown RBP13.72□□□□□ -0.21
KLHL3-201ENST00000309755 FANCIQ9NVI1 1328 aa13.71□□□□□ -0.21
KLHL3-201ENST00000309755 SKOR2Q2VWA4 1001 aaPredicted RBP13.71□□□□□ -0.21
KLHL3-201ENST00000309755 SPAG9O60271 1321 aaKnown RBP13.71□□□□□ -0.21
KLHL3-201ENST00000309755 GGT6Q6P531 493 aa13.71□□□□□ -0.21
KLHL3-201ENST00000309755 BCL2L13Q9BXK5 485 aa13.71□□□□□ -0.21
KLHL3-201ENST00000309755 FAM13BQ9NYF5 915 aa13.71□□□□□ -0.21
KLHL3-201ENST00000309755 ZNF592Q92610 1267 aa13.71□□□□□ -0.22
KLHL3-201ENST00000309755 RRP1P56182 461 aaKnown RBP13.7□□□□□ -0.22
KLHL3-201ENST00000309755 NUP155O75694 1391 aa13.7□□□□□ -0.22
KLHL3-201ENST00000309755 ANKRD45Q5TZF3 282 aa13.7□□□□□ -0.22
KLHL3-201ENST00000309755 RILPL2Q969X0 211 aa13.7□□□□□ -0.22
KLHL3-201ENST00000309755 GOLGA6L19H0YKK7 550 aa13.69□□□□□ -0.22
KLHL3-201ENST00000309755 SETQ01105 290 aaPredicted RBP13.69□□□□□ -0.22
KLHL3-201ENST00000309755 HDGFP51858 240 aaKnown RBP13.69□□□□□ -0.22
KLHL3-201ENST00000309755 PES1O00541 588 aaKnown RBP13.69□□□□□ -0.22
KLHL3-201ENST00000309755 CUX2O14529 1486 aa13.68□□□□□ -0.22
KLHL3-201ENST00000309755 H3BQV1 296 aa13.68□□□□□ -0.22
KLHL3-201ENST00000309755 IFFO2Q5TF58 517 aa13.68□□□□□ -0.22
KLHL3-201ENST00000309755 TAF7LQ5H9L4 462 aa13.68□□□□□ -0.22
KLHL3-201ENST00000309755 KIF15Q9NS87 1388 aa13.67□□□□□ -0.22
KLHL3-201ENST00000309755 MYBBP1AQ9BQG0 1328 aaKnown RBP13.67□□□□□ -0.22
KLHL3-201ENST00000309755 BECN2A8MW95 431 aa13.67□□□□□ -0.22
KLHL3-201ENST00000309755 EIF3AQ14152 1382 aaKnown RBP13.66□□□□□ -0.22
KLHL3-201ENST00000309755 TOMM22Q9NS69 142 aa13.66□□□□□ -0.22
KLHL3-201ENST00000309755 CSB-PGBD3P0DP91 1061 aa13.65□□□□□ -0.22
KLHL3-201ENST00000309755 TPD52L1Q16890 204 aaPredicted RBP13.65□□□□□ -0.22
KLHL3-201ENST00000309755 COG6Q9Y2V7 657 aa13.65□□□□□ -0.22
KLHL3-201ENST00000309755 ANO8Q9HCE9 1232 aaPredicted RBP13.65□□□□□ -0.22
KLHL3-201ENST00000309755 FAM184AQ8NB25 1140 aa13.64□□□□□ -0.23
KLHL3-201ENST00000309755 FMN1Q68DA7 1419 aa13.64□□□□□ -0.23
KLHL3-201ENST00000309755 ELL2O00472 640 aaPredicted RBP13.64□□□□□ -0.23
KLHL3-201ENST00000309755 PHLDB1Q86UU1 1377 aa13.64□□□□□ -0.23
KLHL3-201ENST00000309755 KIF3AQ9Y496 699 aa13.64□□□□□ -0.23
KLHL3-201ENST00000309755 CCDC9Q9Y3X0 531 aaKnown RBP13.64□□□□□ -0.23
KLHL3-201ENST00000309755 ZBED9Q6R2W3 1325 aa13.63□□□□□ -0.23
KLHL3-201ENST00000309755 PATL2C9JE40 543 aaKnown RBP13.63□□□□□ -0.23
KLHL3-201ENST00000309755 ABCC8Q09428 1581 aa13.63□□□□□ -0.23
KLHL3-201ENST00000309755 ATP6V1DQ9Y5K8 247 aa13.62□□□□□ -0.23
KLHL3-201ENST00000309755 PANK3Q9H999 370 aa13.62□□□□□ -0.23
KLHL3-201ENST00000309755 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.62□□□□□ -0.23
KLHL3-201ENST00000309755 PRM3Q9NNZ6 103 aa13.62□□□□□ -0.23
KLHL3-201ENST00000309755 GPS2Q13227 327 aa13.62□□□□□ -0.23
KLHL3-201ENST00000309755 CEP89Q96ST8 783 aa13.62□□□□□ -0.23
KLHL3-201ENST00000309755 TERF2IPQ9NYB0 399 aa13.61□□□□□ -0.23
KLHL3-201ENST00000309755 HDAC5Q9UQL6 1122 aa13.61□□□□□ -0.23
KLHL3-201ENST00000309755 TSR1Q2NL82 804 aaKnown RBP13.61□□□□□ -0.23
KLHL3-201ENST00000309755 NUTM2DQ5VT03 806 aaPredicted RBP13.61□□□□□ -0.23
KLHL3-201ENST00000309755 FAM43AQ8N2R8 423 aa13.61□□□□□ -0.23
KLHL3-201ENST00000309755 MCTP1Q6DN14 999 aa13.61□□□□□ -0.23
KLHL3-201ENST00000309755 LMOD3Q0VAK6 560 aa13.61□□□□□ -0.23
KLHL3-201ENST00000309755 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.61□□□□□ -0.23
KLHL3-201ENST00000309755 PRKRIP1Q9H875 184 aaPredicted RBP13.61□□□□□ -0.23
KLHL3-201ENST00000309755 ZKSCAN2Q63HK3 967 aa13.61□□□□□ -0.23
KLHL3-201ENST00000309755 CHMP4AQ9BY43 222 aa13.6□□□□□ -0.23
KLHL3-201ENST00000309755 CHMP5Q9NZZ3 219 aa13.6□□□□□ -0.23
KLHL3-201ENST00000309755 ANKRD30AQ9BXX3 1397 aa13.6□□□□□ -0.23
KLHL3-201ENST00000309755 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.6□□□□□ -0.23
KLHL3-201ENST00000309755 ST20-MTHFSA0A0A6YYL1 179 aa13.6□□□□□ -0.23
KLHL3-201ENST00000309755 E9PSI1 815 aa13.59□□□□□ -0.23
KLHL3-201ENST00000309755 BCL11BQ9C0K0 894 aaPredicted RBP13.59□□□□□ -0.23
KLHL3-201ENST00000309755 LTV1Q96GA3 475 aaPredicted RBP13.58□□□□□ -0.24
KLHL3-201ENST00000309755 MARCH6O60337 910 aa13.58□□□□□ -0.24
KLHL3-201ENST00000309755 NFKBIBQ15653 356 aa13.58□□□□□ -0.24
KLHL3-201ENST00000309755 TPM1P09493 284 aa13.57□□□□□ -0.24
KLHL3-201ENST00000309755 TEX35Q5T0J7 233 aa13.57□□□□□ -0.24
KLHL3-201ENST00000309755 HOMER1Q86YM7 354 aa13.57□□□□□ -0.24
KLHL3-201ENST00000309755 CGNL1Q0VF96 1302 aa13.57□□□□□ -0.24
KLHL3-201ENST00000309755 VPS53Q5VIR6 699 aa13.57□□□□□ -0.24
KLHL3-201ENST00000309755 CCDC70Q6NSX1 233 aa13.57□□□□□ -0.24
KLHL3-201ENST00000309755 DHX57Q6P158 1386 aaKnown RBP13.57□□□□□ -0.24
KLHL3-201ENST00000309755 CCDC88BA6NC98 1476 aa13.56□□□□□ -0.24
KLHL3-201ENST00000309755 AMPHP49418 695 aa13.56□□□□□ -0.24
KLHL3-201ENST00000309755 R3HCC1Q9Y3T6 440 aaKnown RBP13.56□□□□□ -0.24
KLHL3-201ENST00000309755 FBXW7Q969H0 707 aa13.55□□□□□ -0.24
KLHL3-201ENST00000309755 TRAK1Q9UPV9 953 aa13.55□□□□□ -0.24
KLHL3-201ENST00000309755 DIAPH3Q9NSV4 1193 aa13.55□□□□□ -0.24
KLHL3-201ENST00000309755 APAF1O14727 1248 aa13.55□□□□□ -0.24
KLHL3-201ENST00000309755 HNRNPMP52272 730 aaKnown RBP eCLIP13.55□□□□□ -0.24
KLHL3-201ENST00000309755 BICD2Q8TD16 824 aa13.54□□□□□ -0.24
KLHL3-201ENST00000309755 ANO2Q9NQ90 1003 aa13.54□□□□□ -0.24
KLHL3-201ENST00000309755 REC8O95072 547 aa13.54□□□□□ -0.24
KLHL3-201ENST00000309755 ERCC6Q03468 1493 aa13.54□□□□□ -0.24
KLHL3-201ENST00000309755 CECR2Q9BXF3 1484 aa13.54□□□□□ -0.24
KLHL3-201ENST00000309755 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
KLHL3-201ENST00000309755 FRAT2O75474 233 aaPredicted RBP13.53□□□□□ -0.24
KLHL3-201ENST00000309755 TPM2P07951 284 aa13.53□□□□□ -0.24
KLHL3-201ENST00000309755 NUTM2FA1L443 756 aa13.53□□□□□ -0.24
KLHL3-201ENST00000309755 PCMTD1Q96MG8 357 aaPredicted RBP13.53□□□□□ -0.24
KLHL3-201ENST00000309755 IFT57Q9NWB7 429 aa13.53□□□□□ -0.24
KLHL3-201ENST00000309755 KIF3BO15066 747 aa13.52□□□□□ -0.24
KLHL3-201ENST00000309755 AKAP17AQ02040 695 aaKnown RBP13.52□□□□□ -0.24
KLHL3-201ENST00000309755 NGDNQ8NEJ9 315 aaKnown RBP13.51□□□□□ -0.25
KLHL3-201ENST00000309755 DDX19BQ9UMR2 479 aa13.51□□□□□ -0.25
KLHL3-201ENST00000309755 VPS37CA5D8V6 355 aaPredicted RBP13.51□□□□□ -0.25
KLHL3-201ENST00000309755 BRPF3Q9ULD4 1205 aa13.5□□□□□ -0.25
KLHL3-201ENST00000309755 WWC1Q8IX03 1113 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms