RNA–Protein interactions for RNA: ENST00000309755.8

KLHL3-201, Transcript of kelch like family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL3, Length 6,806 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-201ENST00000309755 DCAF8L2P0C7V8 631 aa18.7■□□□□ 0.58
KLHL3-201ENST00000309755 SUPT5HO00267 1087 aaKnown RBP18.04■□□□□ 0.48
KLHL3-201ENST00000309755 PELP1Q8IZL8 1130 aaKnown RBP17.78■□□□□ 0.44
KLHL3-201ENST00000309755 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
KLHL3-201ENST00000309755 SHROOM4Q9ULL8 1493 aa17.58■□□□□ 0.4
KLHL3-201ENST00000309755 PCGF6Q9BYE7 350 aa17.27■□□□□ 0.35
KLHL3-201ENST00000309755 APLP2Q06481 763 aa17.2■□□□□ 0.34
KLHL3-201ENST00000309755 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
KLHL3-201ENST00000309755 TTBK1Q5TCY1 1321 aaPredicted RBP17.18■□□□□ 0.34
KLHL3-201ENST00000309755 NISCHQ9Y2I1 1504 aa17.13■□□□□ 0.33
KLHL3-201ENST00000309755 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
KLHL3-201ENST00000309755 FAM9AQ8IZU1 332 aaPredicted RBP17.1■□□□□ 0.33
KLHL3-201ENST00000309755 CCER1Q8TC90 406 aaPredicted RBP16.97■□□□□ 0.31
KLHL3-201ENST00000309755 ZEB1P37275 1124 aaPredicted RBP16.9■□□□□ 0.3
KLHL3-201ENST00000309755 MYT1Q01538 1121 aa16.86■□□□□ 0.29
KLHL3-201ENST00000309755 YTHDC1Q96MU7 727 aaKnown RBP16.82■□□□□ 0.28
KLHL3-201ENST00000309755 RANGAP1P46060 587 aaPredicted RBP16.78■□□□□ 0.28
KLHL3-201ENST00000309755 NEFLP07196 543 aa16.71■□□□□ 0.27
KLHL3-201ENST00000309755 TRIM41Q8WV44 630 aa16.6■□□□□ 0.25
KLHL3-201ENST00000309755 ATP1B4Q9UN42 357 aaPredicted RBP16.58■□□□□ 0.24
KLHL3-201ENST00000309755 PPARGC1BQ86YN6 1023 aaKnown RBP16.49■□□□□ 0.23
KLHL3-201ENST00000309755 UBTFP17480 764 aaKnown RBP16.47■□□□□ 0.23
KLHL3-201ENST00000309755 HRCP23327 699 aa16.36■□□□□ 0.21
KLHL3-201ENST00000309755 TRIM26Q12899 539 aaPredicted RBP16.34■□□□□ 0.21
KLHL3-201ENST00000309755 DAXXQ9UER7 740 aaPredicted RBP16.29■□□□□ 0.2
KLHL3-201ENST00000309755 POLR3GLQ9BT43 218 aa16.15■□□□□ 0.18
KLHL3-201ENST00000309755 ITGAEP38570 1179 aa16.12■□□□□ 0.17
KLHL3-201ENST00000309755 CNGB1Q14028 1251 aaPredicted RBP16.09■□□□□ 0.17
KLHL3-201ENST00000309755 LOC105371045A0A1W2PR82 267 aa16.07■□□□□ 0.16
KLHL3-201ENST00000309755 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
KLHL3-201ENST00000309755 RTL5Q5HYW3 569 aaPredicted RBP16.01■□□□□ 0.15
KLHL3-201ENST00000309755 DIEXFQ68CQ4 756 aaKnown RBP15.98■□□□□ 0.15
KLHL3-201ENST00000309755 ZNF316A6NFI3 1004 aaPredicted RBP15.93■□□□□ 0.14
KLHL3-201ENST00000309755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.93■□□□□ 0.14
KLHL3-201ENST00000309755 CLSPNQ9HAW4 1339 aa15.86■□□□□ 0.13
KLHL3-201ENST00000309755 GTF3C3Q9Y5Q9 886 aa15.86■□□□□ 0.13
KLHL3-201ENST00000309755 BCANQ96GW7 911 aa15.85■□□□□ 0.13
KLHL3-201ENST00000309755 CHIC1Q5VXU3 224 aa15.84■□□□□ 0.13
KLHL3-201ENST00000309755 MYT1LQ9UL68 1186 aa15.83■□□□□ 0.12
KLHL3-201ENST00000309755 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
KLHL3-201ENST00000309755 CDK11AQ9UQ88 783 aaPredicted RBP15.66■□□□□ 0.1
KLHL3-201ENST00000309755 NEUROD1Q13562 356 aa15.62■□□□□ 0.09
KLHL3-201ENST00000309755 FAM50AQ14320 339 aaKnown RBP15.6■□□□□ 0.09
KLHL3-201ENST00000309755 ANP32CO43423 234 aa15.55■□□□□ 0.08
KLHL3-201ENST00000309755 TRIM52Q96A61 297 aa15.53■□□□□ 0.08
KLHL3-201ENST00000309755 ACIN1Q9UKV3 1341 aaKnown RBP15.53■□□□□ 0.08
KLHL3-201ENST00000309755 ZNF326Q5BKZ1 582 aaKnown RBP15.43■□□□□ 0.06
KLHL3-201ENST00000309755 BCL11AQ9H165 835 aa15.43■□□□□ 0.06
KLHL3-201ENST00000309755 EIF5BO60841 1220 aaKnown RBP15.42■□□□□ 0.06
KLHL3-201ENST00000309755 ANP32AP39687 249 aaKnown RBP15.41■□□□□ 0.06
KLHL3-201ENST00000309755 NPM2Q86SE8 214 aaKnown RBP15.4■□□□□ 0.06
KLHL3-201ENST00000309755 ZBTB47Q9UFB7 747 aaPredicted RBP15.4■□□□□ 0.06
KLHL3-201ENST00000309755 CANXP27824 592 aaKnown RBP15.36■□□□□ 0.05
KLHL3-201ENST00000309755 FKBP8Q14318 412 aa15.3■□□□□ 0.04
KLHL3-201ENST00000309755 SLC24A1O60721 1099 aa15.23■□□□□ 0.03
KLHL3-201ENST00000309755 NBR1Q14596 966 aa15.19■□□□□ 0.02
KLHL3-201ENST00000309755 ANP32BQ92688 251 aaKnown RBP15.16■□□□□ 0.02
KLHL3-201ENST00000309755 GLIPR1L2Q4G1C9 344 aa15.12■□□□□ 0.01
KLHL3-201ENST00000309755 HNRNPUQ00839 825 aaKnown RBP eCLIP15.11■□□□□ 0.01
KLHL3-201ENST00000309755 HSP90AA1P07900 732 aaKnown RBP15.11■□□□□ 0.01
KLHL3-201ENST00000309755 NEFMP07197 916 aa15.11■□□□□ 0.01
KLHL3-201ENST00000309755 SCAF1Q9H7N4 1312 aaKnown RBP15.09■□□□□ 0.01
KLHL3-201ENST00000309755 ARXQ96QS3 562 aa15.08■□□□□ 0
KLHL3-201ENST00000309755 FAM9BQ8IZU0 186 aa15.07■□□□□ 0
KLHL3-201ENST00000309755 P3H3Q8IVL6 736 aa15.06■□□□□ 0
KLHL3-201ENST00000309755 DDX10Q13206 875 aaKnown RBP15.05■□□□□ 0
KLHL3-201ENST00000309755 ARID3CA6NKF2 412 aa15.04■□□□□ -0
KLHL3-201ENST00000309755 SALL2Q9Y467 1007 aaPredicted RBP15.04■□□□□ -0
KLHL3-201ENST00000309755 UPF2Q9HAU5 1272 aaKnown RBP15.03■□□□□ -0
KLHL3-201ENST00000309755 CCDC136Q96JN2 1154 aa15□□□□□ -0.01
KLHL3-201ENST00000309755 IRX6P78412 446 aaPredicted RBP14.97□□□□□ -0.01
KLHL3-201ENST00000309755 PABPN1Q86U42 306 aaKnown RBP eCLIP14.97□□□□□ -0.01
KLHL3-201ENST00000309755 TONSLQ96HA7 1378 aa14.96□□□□□ -0.02
KLHL3-201ENST00000309755 FBLN2P98095 1184 aa14.95□□□□□ -0.02
KLHL3-201ENST00000309755 ZNF777Q9ULD5 760 aaPredicted RBP14.94□□□□□ -0.02
KLHL3-201ENST00000309755 CSRNP3Q8WYN3 585 aa14.92□□□□□ -0.02
KLHL3-201ENST00000309755 MIER1Q8N108 512 aa14.91□□□□□ -0.02
KLHL3-201ENST00000309755 TMC1Q8TDI8 760 aa14.87□□□□□ -0.03
KLHL3-201ENST00000309755 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.85□□□□□ -0.03
KLHL3-201ENST00000309755 DCAF1Q9Y4B6 1507 aa14.84□□□□□ -0.03
KLHL3-201ENST00000309755 MRS2Q9HD23 443 aa14.83□□□□□ -0.04
KLHL3-201ENST00000309755 HIRIP3Q9BW71 556 aaPredicted RBP14.81□□□□□ -0.04
KLHL3-201ENST00000309755 ANP32EQ9BTT0 268 aa14.79□□□□□ -0.04
KLHL3-201ENST00000309755 CHGAP10645 457 aaKnown RBP14.79□□□□□ -0.04
KLHL3-201ENST00000309755 WDR43Q15061 677 aaKnown RBP eCLIP14.77□□□□□ -0.05
KLHL3-201ENST00000309755 ABCC9O60706 1549 aa14.74□□□□□ -0.05
KLHL3-201ENST00000309755 TRIM44Q96DX7 344 aaPredicted RBP14.74□□□□□ -0.05
KLHL3-201ENST00000309755 CHIC2Q9UKJ5 165 aa14.73□□□□□ -0.05
KLHL3-201ENST00000309755 DDRGK1Q96HY6 314 aa14.72□□□□□ -0.05
KLHL3-201ENST00000309755 RTN4Q9NQC3 1192 aaKnown RBP14.71□□□□□ -0.05
KLHL3-201ENST00000309755 KDM2AQ9Y2K7 1162 aa14.69□□□□□ -0.06
KLHL3-201ENST00000309755 BECN1Q14457 450 aa14.69□□□□□ -0.06
KLHL3-201ENST00000309755 SENP3-EIF4A1A0A087X0R7 540 aa14.67□□□□□ -0.06
KLHL3-201ENST00000309755 STAG3Q9UJ98 1225 aa14.67□□□□□ -0.06
KLHL3-201ENST00000309755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.06
KLHL3-201ENST00000309755 MYH16Q9H6N6 1097 aa14.64□□□□□ -0.07
KLHL3-201ENST00000309755 SUPT16HQ9Y5B9 1047 aaKnown RBP14.64□□□□□ -0.07
KLHL3-201ENST00000309755 NCLP19338 710 aaKnown RBP14.63□□□□□ -0.07
KLHL3-201ENST00000309755 LAS1LQ9Y4W2 734 aaKnown RBP14.62□□□□□ -0.07
KLHL3-201ENST00000309755 NAP1L5Q96NT1 182 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms