RNA–Protein interactions for RNA: ENST00000307616.1

C11orf40-201, Transcript of chromosome 11 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf40, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf40-201ENST00000307616 KCNK17Q96T54 332 aa13.13□□□□□ -0.31
C11orf40-201ENST00000307616 PTPREP23469 700 aa13.12□□□□□ -0.31
C11orf40-201ENST00000307616 EN1Q05925 392 aaPredicted RBP13.12□□□□□ -0.31
C11orf40-201ENST00000307616 MAP3K7O43318 606 aa13.1□□□□□ -0.31
C11orf40-201ENST00000307616 TSR1Q2NL82 804 aaKnown RBP13.09□□□□□ -0.31
C11orf40-201ENST00000307616 KCNH8Q96L42 1107 aa13.09□□□□□ -0.31
C11orf40-201ENST00000307616 C6orf132Q5T0Z8 1188 aa13.08□□□□□ -0.32
C11orf40-201ENST00000307616 DMRTA1Q5VZB9 504 aa13.08□□□□□ -0.32
C11orf40-201ENST00000307616 LSM11P83369 360 aaKnown RBP eCLIP13.06□□□□□ -0.32
C11orf40-201ENST00000307616 SMYD5Q6GMV2 418 aa13.05□□□□□ -0.32
C11orf40-201ENST00000307616 ANKRD13DQ6ZTN6 518 aa13.05□□□□□ -0.32
C11orf40-201ENST00000307616 COL9A1P20849 921 aa13.04□□□□□ -0.32
C11orf40-201ENST00000307616 CDHR5Q9HBB8 845 aa13.03□□□□□ -0.32
C11orf40-201ENST00000307616 PPP1R3GB7ZBB8 358 aa13.02□□□□□ -0.33
C11orf40-201ENST00000307616 RBM26Q5T8P6 1007 aaKnown RBP13.01□□□□□ -0.33
C11orf40-201ENST00000307616 ZBED2Q9BTP6 218 aa12.98□□□□□ -0.33
C11orf40-201ENST00000307616 NUTM2FA1L443 756 aa12.97□□□□□ -0.33
C11orf40-201ENST00000307616 ADGRD1Q6QNK2 874 aa12.97□□□□□ -0.33
C11orf40-201ENST00000307616 TULP1O00294 542 aaPredicted RBP12.96□□□□□ -0.33
C11orf40-201ENST00000307616 PROX2Q3B8N5 592 aa12.95□□□□□ -0.34
C11orf40-201ENST00000307616 VPS9D1Q9Y2B5 631 aa12.95□□□□□ -0.34
C11orf40-201ENST00000307616 TK2O00142 265 aa12.94□□□□□ -0.34
C11orf40-201ENST00000307616 SLC4A5Q9BY07 1137 aa12.94□□□□□ -0.34
C11orf40-201ENST00000307616 NPDC1Q9NQX5 325 aaPredicted RBP12.94□□□□□ -0.34
C11orf40-201ENST00000307616 SPNS2Q8IVW8 549 aa12.92□□□□□ -0.34
C11orf40-201ENST00000307616 CERKQ8TCT0 537 aa12.92□□□□□ -0.34
C11orf40-201ENST00000307616 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.91□□□□□ -0.34
C11orf40-201ENST00000307616 BCANQ96GW7 911 aa12.91□□□□□ -0.34
C11orf40-201ENST00000307616 PTGDRQ13258 359 aa12.9□□□□□ -0.34
C11orf40-201ENST00000307616 CDCA7LQ96GN5 454 aa12.9□□□□□ -0.34
C11orf40-201ENST00000307616 PRSS12P56730 875 aa12.89□□□□□ -0.35
C11orf40-201ENST00000307616 TRIM6-TRIM34B2RNG4 842 aa12.88□□□□□ -0.35
C11orf40-201ENST00000307616 HRO43593 1189 aa12.88□□□□□ -0.35
C11orf40-201ENST00000307616 FCHSD2O94868 740 aa12.87□□□□□ -0.35
C11orf40-201ENST00000307616 LMOD2Q6P5Q4 547 aa12.87□□□□□ -0.35
C11orf40-201ENST00000307616 GPIHBP1Q8IV16 184 aa12.87□□□□□ -0.35
C11orf40-201ENST00000307616 KIAA1468Q9P260 1216 aa12.87□□□□□ -0.35
C11orf40-201ENST00000307616 TSKSQ9UJT2 592 aa12.87□□□□□ -0.35
C11orf40-201ENST00000307616 PADI6Q6TGC4 694 aa12.85□□□□□ -0.35
C11orf40-201ENST00000307616 FAM198AQ9UFP1 575 aa12.85□□□□□ -0.35
C11orf40-201ENST00000307616 RABGEF1Q9UJ41 708 aa12.85□□□□□ -0.35
C11orf40-201ENST00000307616 BHMG1C9JSJ3 638 aaPredicted RBP12.84□□□□□ -0.35
C11orf40-201ENST00000307616 ONECUT3O60422 494 aaPredicted RBP12.84□□□□□ -0.35
C11orf40-201ENST00000307616 GPR37O15354 613 aa12.83□□□□□ -0.36
C11orf40-201ENST00000307616 STAC3Q96MF2 364 aa12.83□□□□□ -0.36
C11orf40-201ENST00000307616 RBM27Q9P2N5 1060 aaKnown RBP12.83□□□□□ -0.36
C11orf40-201ENST00000307616 PACS2Q86VP3 889 aa12.81□□□□□ -0.36
C11orf40-201ENST00000307616 NBPF3Q9H094 633 aa12.81□□□□□ -0.36
C11orf40-201ENST00000307616 HIC1Q14526 733 aa12.8□□□□□ -0.36
C11orf40-201ENST00000307616 MRPL50Q8N5N7 158 aaKnown RBP12.8□□□□□ -0.36
C11orf40-201ENST00000307616 TTC13Q8NBP0 860 aa12.8□□□□□ -0.36
C11orf40-201ENST00000307616 SEPT9Q9UHD8 586 aaPredicted RBP12.79□□□□□ -0.36
C11orf40-201ENST00000307616 MYT1LQ9UL68 1186 aa12.79□□□□□ -0.36
C11orf40-201ENST00000307616 C3orf80F5H4A9 247 aa12.78□□□□□ -0.36
C11orf40-201ENST00000307616 GNPATO15228 680 aa12.78□□□□□ -0.36
C11orf40-201ENST00000307616 MMRN1Q13201 1228 aa12.78□□□□□ -0.36
C11orf40-201ENST00000307616 SMAPO00193 183 aa12.77□□□□□ -0.37
C11orf40-201ENST00000307616 FECHP22830 423 aa12.77□□□□□ -0.37
C11orf40-201ENST00000307616 PLSCR2Q9NRY7 297 aa12.77□□□□□ -0.37
C11orf40-201ENST00000307616 PNMA3Q9UL41 463 aa12.77□□□□□ -0.37
C11orf40-201ENST00000307616 NBPF26B4DH59 902 aa12.75□□□□□ -0.37
C11orf40-201ENST00000307616 NUDT18Q6ZVK8 323 aa12.75□□□□□ -0.37
C11orf40-201ENST00000307616 TATDN2Q93075 761 aa12.75□□□□□ -0.37
C11orf40-201ENST00000307616 FAM161AQ3B820 660 aa12.74□□□□□ -0.37
C11orf40-201ENST00000307616 GOLGA8CPA6NN73 597 aa12.73□□□□□ -0.37
C11orf40-201ENST00000307616 RNF166Q96A37 237 aaPredicted RBP12.73□□□□□ -0.37
C11orf40-201ENST00000307616 LAPTM4BQ86VI4 370 aa12.72□□□□□ -0.37
C11orf40-201ENST00000307616 FAM98CQ17RN3 349 aaKnown RBP12.71□□□□□ -0.37
C11orf40-201ENST00000307616 ZC3H15Q8WU90 426 aaKnown RBP12.71□□□□□ -0.37
C11orf40-201ENST00000307616 KCTD12Q96CX2 325 aaKnown RBP12.7□□□□□ -0.38
C11orf40-201ENST00000307616 ADGRG1Q9Y653 693 aa12.7□□□□□ -0.38
C11orf40-201ENST00000307616 ZFRQ96KR1 1074 aaKnown RBP12.69□□□□□ -0.38
C11orf40-201ENST00000307616 WNT2BQ93097 391 aa12.68□□□□□ -0.38
C11orf40-201ENST00000307616 EYA1Q99502 592 aa12.68□□□□□ -0.38
C11orf40-201ENST00000307616 RBM46Q8TBY0 533 aaKnown RBP12.65□□□□□ -0.38
C11orf40-201ENST00000307616 ZMYND10O75800 440 aa12.64□□□□□ -0.39
C11orf40-201ENST00000307616 MAP2K5Q13163 448 aa12.64□□□□□ -0.39
C11orf40-201ENST00000307616 ANKK1Q8NFD2 765 aa12.64□□□□□ -0.39
C11orf40-201ENST00000307616 OATP04181 439 aa12.62□□□□□ -0.39
C11orf40-201ENST00000307616 PXYLP1Q8TE99 480 aa12.62□□□□□ -0.39
C11orf40-201ENST00000307616 THSD4Q6ZMP0 1018 aa12.61□□□□□ -0.39
C11orf40-201ENST00000307616 BARGINQ6ZT62 677 aa12.61□□□□□ -0.39
C11orf40-201ENST00000307616 SAMD7Q7Z3H4 446 aa12.61□□□□□ -0.39
C11orf40-201ENST00000307616 METTL3Q86U44 580 aaKnown RBP12.61□□□□□ -0.39
C11orf40-201ENST00000307616 IRF6O14896 467 aa12.6□□□□□ -0.39
C11orf40-201ENST00000307616 BCAMP50895 628 aa12.6□□□□□ -0.39
C11orf40-201ENST00000307616 KRI1Q8N9T8 703 aaKnown RBP12.6□□□□□ -0.39
C11orf40-201ENST00000307616 MINK1Q8N4C8 1332 aaPredicted RBP12.6□□□□□ -0.39
C11orf40-201ENST00000307616 RCCD1A6NED2 376 aa12.59□□□□□ -0.39
C11orf40-201ENST00000307616 LRCH3Q96II8 777 aa12.59□□□□□ -0.39
C11orf40-201ENST00000307616 SOWAHBA6NEL2 793 aa12.58□□□□□ -0.4
C11orf40-201ENST00000307616 DNAJB2P25686 324 aa12.58□□□□□ -0.4
C11orf40-201ENST00000307616 SWT1Q5T5J6 900 aaKnown RBP12.58□□□□□ -0.4
C11orf40-201ENST00000307616 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.58□□□□□ -0.4
C11orf40-201ENST00000307616 HDGFP51858 240 aaKnown RBP12.57□□□□□ -0.4
C11orf40-201ENST00000307616 PTPN5P54829 565 aa12.57□□□□□ -0.4
C11orf40-201ENST00000307616 CCDC102AQ96A19 550 aa12.57□□□□□ -0.4
C11orf40-201ENST00000307616 PHOX2BQ99453 314 aa12.57□□□□□ -0.4
C11orf40-201ENST00000307616 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.55□□□□□ -0.4
C11orf40-201ENST00000307616 NLRP7Q8WX94 980 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms