RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 SMC4Q9NTJ3 1288 aa6.9□□□□□ -1.31
CPSF2-201ENST00000298875 MRC2Q9UBG0 1479 aa6.9□□□□□ -1.31
CPSF2-201ENST00000298875 HDGFL2Q7Z4V5 671 aaPredicted RBP6.9□□□□□ -1.31
CPSF2-201ENST00000298875 ZNF771Q7L3S4 317 aaPredicted RBP6.9□□□□□ -1.31
CPSF2-201ENST00000298875 FANCD2Q9BXW9 1451 aa6.89□□□□□ -1.31
CPSF2-201ENST00000298875 PAK3O75914 559 aaPredicted RBP6.89□□□□□ -1.31
CPSF2-201ENST00000298875 STK26Q9P289 416 aa6.89□□□□□ -1.31
CPSF2-201ENST00000298875 SPAG9O60271 1321 aaKnown RBP6.89□□□□□ -1.31
CPSF2-201ENST00000298875 VPS53Q5VIR6 699 aa6.89□□□□□ -1.31
CPSF2-201ENST00000298875 CWC15Q9P013 229 aaKnown RBP6.89□□□□□ -1.31
CPSF2-201ENST00000298875 TPD52L1Q16890 204 aaPredicted RBP6.89□□□□□ -1.31
CPSF2-201ENST00000298875 DDX11L8A8MPP1 907 aa6.88□□□□□ -1.31
CPSF2-201ENST00000298875 CCAR2Q8N163 923 aaKnown RBP6.88□□□□□ -1.31
CPSF2-201ENST00000298875 MLECQ14165 292 aa6.88□□□□□ -1.31
CPSF2-201ENST00000298875 KIF16BQ96L93 1317 aa6.88□□□□□ -1.31
CPSF2-201ENST00000298875 CCDC66A2RUB6 948 aa6.88□□□□□ -1.31
CPSF2-201ENST00000298875 U2AF1L5P0DN76 240 aaPredicted RBP6.88□□□□□ -1.31
CPSF2-201ENST00000298875 U2AF1Q01081 240 aaKnown RBP eCLIP6.88□□□□□ -1.31
CPSF2-201ENST00000298875 TAF7LQ5H9L4 462 aa6.87□□□□□ -1.31
CPSF2-201ENST00000298875 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.87□□□□□ -1.31
CPSF2-201ENST00000298875 TSHZ2Q9NRE2 1034 aa6.87□□□□□ -1.31
CPSF2-201ENST00000298875 SLC4A10Q6U841 1118 aa6.87□□□□□ -1.31
CPSF2-201ENST00000298875 TMX4Q9H1E5 349 aaPredicted RBP6.87□□□□□ -1.31
CPSF2-201ENST00000298875 CSB-PGBD3P0DP91 1061 aa6.87□□□□□ -1.31
CPSF2-201ENST00000298875 TSR1Q2NL82 804 aaKnown RBP6.87□□□□□ -1.31
CPSF2-201ENST00000298875 ST18O60284 1047 aa6.87□□□□□ -1.31
CPSF2-201ENST00000298875 TEX35Q5T0J7 233 aa6.87□□□□□ -1.31
CPSF2-201ENST00000298875 HMMRO75330 724 aa6.86□□□□□ -1.31
CPSF2-201ENST00000298875 STK31Q9BXU1 1019 aa6.86□□□□□ -1.31
CPSF2-201ENST00000298875 FBXO3Q9UK99 471 aa6.86□□□□□ -1.31
CPSF2-201ENST00000298875 PKNOX2Q96KN3 472 aa6.86□□□□□ -1.31
CPSF2-201ENST00000298875 H3BQV1 296 aa6.86□□□□□ -1.31
CPSF2-201ENST00000298875 SKOR2Q2VWA4 1001 aaPredicted RBP6.86□□□□□ -1.31
CPSF2-201ENST00000298875 IFFO2Q5TF58 517 aa6.86□□□□□ -1.31
CPSF2-201ENST00000298875 CCDC70Q6NSX1 233 aa6.86□□□□□ -1.31
CPSF2-201ENST00000298875 CCDC146Q8IYE0 955 aa6.86□□□□□ -1.31
CPSF2-201ENST00000298875 VSIG10Q8N0Z9 540 aa6.86□□□□□ -1.31
CPSF2-201ENST00000298875 RALBP1Q15311 655 aa6.86□□□□□ -1.31
CPSF2-201ENST00000298875 ZNF592Q92610 1267 aa6.85□□□□□ -1.31
CPSF2-201ENST00000298875 CENPJQ9HC77 1338 aaPredicted RBP6.85□□□□□ -1.31
CPSF2-201ENST00000298875 TPM2P07951 284 aa6.85□□□□□ -1.31
CPSF2-201ENST00000298875 TOMM22Q9NS69 142 aa6.85□□□□□ -1.31
CPSF2-201ENST00000298875 GOLGA6L19H0YKK7 550 aa6.85□□□□□ -1.31
CPSF2-201ENST00000298875 FMN1Q68DA7 1419 aa6.85□□□□□ -1.31
CPSF2-201ENST00000298875 APPP05067 770 aa6.85□□□□□ -1.31
CPSF2-201ENST00000298875 KIF3AQ9Y496 699 aa6.85□□□□□ -1.31
CPSF2-201ENST00000298875 SF3A1Q15459 793 aaKnown RBP6.85□□□□□ -1.31
CPSF2-201ENST00000298875 G3V3G9 751 aa6.85□□□□□ -1.31
CPSF2-201ENST00000298875 DCAF8Q5TAQ9 597 aa6.85□□□□□ -1.31
CPSF2-201ENST00000298875 CLUAP1Q96AJ1 413 aa6.85□□□□□ -1.31
CPSF2-201ENST00000298875 MARCH6O60337 910 aa6.84□□□□□ -1.31
CPSF2-201ENST00000298875 FOXD4L6Q3SYB3 417 aaPredicted RBP6.84□□□□□ -1.31
CPSF2-201ENST00000298875 FOXD4L3Q6VB84 417 aaPredicted RBP6.84□□□□□ -1.31
CPSF2-201ENST00000298875 GSE1Q14687 1217 aa6.84□□□□□ -1.31
CPSF2-201ENST00000298875 CCDC9Q9Y3X0 531 aaKnown RBP6.84□□□□□ -1.31
CPSF2-201ENST00000298875 TPM1P09493 284 aa6.84□□□□□ -1.32
CPSF2-201ENST00000298875 PKD2Q13563 968 aa6.84□□□□□ -1.32
CPSF2-201ENST00000298875 EFCAB2Q5VUJ9 269 aa6.84□□□□□ -1.32
CPSF2-201ENST00000298875 DDX49Q9Y6V7 483 aaKnown RBP6.83□□□□□ -1.32
CPSF2-201ENST00000298875 DHX8Q14562 1220 aaKnown RBP6.83□□□□□ -1.32
CPSF2-201ENST00000298875 RILPL2Q969X0 211 aa6.83□□□□□ -1.32
CPSF2-201ENST00000298875 GRIN2BQ13224 1484 aa6.82□□□□□ -1.32
CPSF2-201ENST00000298875 PCMTD1Q96MG8 357 aaPredicted RBP6.82□□□□□ -1.32
CPSF2-201ENST00000298875 ATP6V1DQ9Y5K8 247 aa6.82□□□□□ -1.32
CPSF2-201ENST00000298875 PHLDB1Q86UU1 1377 aa6.82□□□□□ -1.32
CPSF2-201ENST00000298875 SLC4A3P48751 1232 aa6.82□□□□□ -1.32
CPSF2-201ENST00000298875 CHMP4CQ96CF2 233 aa6.82□□□□□ -1.32
CPSF2-201ENST00000298875 FANCIQ9NVI1 1328 aa6.82□□□□□ -1.32
CPSF2-201ENST00000298875 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.82□□□□□ -1.32
CPSF2-201ENST00000298875 WWC1Q8IX03 1113 aa6.82□□□□□ -1.32
CPSF2-201ENST00000298875 TIMELESSQ9UNS1 1208 aa6.82□□□□□ -1.32
CPSF2-201ENST00000298875 USP8P40818 1118 aa6.82□□□□□ -1.32
CPSF2-201ENST00000298875 FAM184AQ8NB25 1140 aa6.81□□□□□ -1.32
CPSF2-201ENST00000298875 CARMIL1Q5VZK9 1371 aa6.81□□□□□ -1.32
CPSF2-201ENST00000298875 BECN2A8MW95 431 aa6.81□□□□□ -1.32
CPSF2-201ENST00000298875 ACBD3Q9H3P7 528 aa6.81□□□□□ -1.32
CPSF2-201ENST00000298875 TCEAL9Q9UHQ7 104 aa6.81□□□□□ -1.32
CPSF2-201ENST00000298875 MCTP1Q6DN14 999 aa6.81□□□□□ -1.32
CPSF2-201ENST00000298875 POGZQ7Z3K3 1410 aa6.81□□□□□ -1.32
CPSF2-201ENST00000298875 RAB3GAP2Q9H2M9 1393 aa6.81□□□□□ -1.32
CPSF2-201ENST00000298875 FAM161AQ3B820 660 aa6.81□□□□□ -1.32
CPSF2-201ENST00000298875 MROH2BQ7Z745 1585 aa6.81□□□□□ -1.32
CPSF2-201ENST00000298875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.81□□□□□ -1.326e-7■■■■□ 23.5
CPSF2-201ENST00000298875 NEFHP12036 1026 aa6.81□□□□□ -1.32
CPSF2-201ENST00000298875 HDAC5Q9UQL6 1122 aa6.8□□□□□ -1.32
CPSF2-201ENST00000298875 FRAT2O75474 233 aaPredicted RBP6.8□□□□□ -1.32
CPSF2-201ENST00000298875 NUP155O75694 1391 aa6.8□□□□□ -1.32
CPSF2-201ENST00000298875 KIF15Q9NS87 1388 aa6.8□□□□□ -1.32
CPSF2-201ENST00000298875 CENPQQ7L2Z9 268 aaPredicted RBP6.8□□□□□ -1.32
CPSF2-201ENST00000298875 VPS8Q8N3P4 1428 aa6.8□□□□□ -1.32
CPSF2-201ENST00000298875 RRP9O43818 475 aaKnown RBP6.8□□□□□ -1.32
CPSF2-201ENST00000298875 ANKRD45Q5TZF3 282 aa6.8□□□□□ -1.32
CPSF2-201ENST00000298875 CAVIN1Q6NZI2 390 aaKnown RBP6.79□□□□□ -1.32
CPSF2-201ENST00000298875 FAM13BQ9NYF5 915 aa6.79□□□□□ -1.32
CPSF2-201ENST00000298875 PODXL2Q9NZ53 605 aa6.79□□□□□ -1.32
CPSF2-201ENST00000298875 CFTRP13569 1480 aa6.79□□□□□ -1.32
CPSF2-201ENST00000298875 TERF2IPQ9NYB0 399 aa6.79□□□□□ -1.32
CPSF2-201ENST00000298875 RRP7AQ9Y3A4 280 aaKnown RBP6.79□□□□□ -1.32
CPSF2-201ENST00000298875 DMRT2Q9Y5R5 561 aa6.79□□□□□ -1.32
CPSF2-201ENST00000298875 STK11IPQ8N1F8 1099 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms