RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.18□□□□□ -0.94
TSC1-201ENST00000298552 V9GYY5 206 aaPredicted RBP9.18□□□□□ -0.94
TSC1-201ENST00000298552 PLPPR3Q6T4P5 718 aa9.18□□□□□ -0.94
TSC1-201ENST00000298552 DIAPH3Q9NSV4 1193 aa9.18□□□□□ -0.94
TSC1-201ENST00000298552 LUC7LQ9NQ29 371 aaKnown RBP9.17□□□□□ -0.94
TSC1-201ENST00000298552 CCDC66A2RUB6 948 aa9.17□□□□□ -0.94
TSC1-201ENST00000298552 HSP90AB2PQ58FF8 381 aa9.17□□□□□ -0.94
TSC1-201ENST00000298552 HOMER1Q86YM7 354 aa9.17□□□□□ -0.94
TSC1-201ENST00000298552 SF3A1Q15459 793 aaKnown RBP9.17□□□□□ -0.94
TSC1-201ENST00000298552 RTF1Q92541 710 aaKnown RBP9.17□□□□□ -0.94
TSC1-201ENST00000298552 GTPBP4Q9BZE4 634 aaKnown RBP9.17□□□□□ -0.94
TSC1-201ENST00000298552 FAM193AP78312 1265 aa9.17□□□□□ -0.94
TSC1-201ENST00000298552 DDX23Q9BUQ8 820 aaKnown RBP9.16□□□□□ -0.94
TSC1-201ENST00000298552 GBP2P32456 591 aaPredicted RBP9.16□□□□□ -0.94
TSC1-201ENST00000298552 EPS15P42566 896 aa9.16□□□□□ -0.94
TSC1-201ENST00000298552 KIF20AO95235 890 aa9.16□□□□□ -0.94
TSC1-201ENST00000298552 CLASRPQ8N2M8 674 aaKnown RBP9.16□□□□□ -0.94
TSC1-201ENST00000298552 ZNF771Q7L3S4 317 aaPredicted RBP9.16□□□□□ -0.94
TSC1-201ENST00000298552 MYH10P35580 1976 aa9.16□□□□□ -0.94
TSC1-201ENST00000298552 ANKRD18BA2A2Z9 1011 aa9.16□□□□□ -0.94
TSC1-201ENST00000298552 GOLGA6L10A6NI86 522 aa9.16□□□□□ -0.94
TSC1-201ENST00000298552 CCDC97Q96F63 343 aaPredicted RBP9.15□□□□□ -0.94
TSC1-201ENST00000298552 SEPT10Q9P0V9 454 aa9.15□□□□□ -0.94
TSC1-201ENST00000298552 SYNE3Q6ZMZ3 975 aa9.15□□□□□ -0.94
TSC1-201ENST00000298552 CCDC180Q9P1Z9 1646 aa9.15□□□□□ -0.94
TSC1-201ENST00000298552 EIF3JO75822 258 aaKnown RBP9.15□□□□□ -0.94
TSC1-201ENST00000298552 PPP1R1BQ9UD71 204 aaPredicted RBP9.15□□□□□ -0.95
TSC1-201ENST00000298552 NOP58Q9Y2X3 529 aaKnown RBP9.15□□□□□ -0.95
TSC1-201ENST00000298552 CHMP5Q9NZZ3 219 aa9.15□□□□□ -0.95
TSC1-201ENST00000298552 CROCCQ5TZA2 2017 aa9.14□□□□□ -0.95
TSC1-201ENST00000298552 DDX11L8A8MPP1 907 aa9.14□□□□□ -0.95
TSC1-201ENST00000298552 ZNF710Q8N1W2 664 aa9.14□□□□□ -0.95
TSC1-201ENST00000298552 CCDC91Q7Z6B0 441 aa9.14□□□□□ -0.95
TSC1-201ENST00000298552 HMGB2P26583 209 aaKnown RBP9.14□□□□□ -0.95
TSC1-201ENST00000298552 FAM161AQ3B820 660 aa9.14□□□□□ -0.95
TSC1-201ENST00000298552 RSPH6AQ9H0K4 717 aa9.14□□□□□ -0.95
TSC1-201ENST00000298552 ZNHIT6Q9NWK9 470 aaKnown RBP9.13□□□□□ -0.95
TSC1-201ENST00000298552 SCRIBQ14160 1630 aa9.13□□□□□ -0.95
TSC1-201ENST00000298552 FAM114A2Q9NRY5 505 aa9.13□□□□□ -0.95
TSC1-201ENST00000298552 ZWINTO95229 277 aa9.13□□□□□ -0.95
TSC1-201ENST00000298552 BECN2A8MW95 431 aa9.12□□□□□ -0.95
TSC1-201ENST00000298552 SPAG9O60271 1321 aaKnown RBP9.12□□□□□ -0.95
TSC1-201ENST00000298552 CCAR2Q8N163 923 aaKnown RBP9.12□□□□□ -0.95
TSC1-201ENST00000298552 ST18O60284 1047 aa9.12□□□□□ -0.95
TSC1-201ENST00000298552 PCMTD1Q96MG8 357 aaPredicted RBP9.12□□□□□ -0.95
TSC1-201ENST00000298552 HSP90AB4PQ58FF6 505 aa9.12□□□□□ -0.95
TSC1-201ENST00000298552 RWDD1Q9H446 243 aaPredicted RBP9.12□□□□□ -0.95
TSC1-201ENST00000298552 TRIM29Q14134 588 aa9.11□□□□□ -0.95
TSC1-201ENST00000298552 SYCP1Q15431 976 aa9.11□□□□□ -0.95
TSC1-201ENST00000298552 BAZ2BQ9UIF8 2168 aaKnown RBP9.11□□□□□ -0.95
TSC1-201ENST00000298552 KIAA0754O94854 1291 aa9.11□□□□□ -0.95
TSC1-201ENST00000298552 SKOR2Q2VWA4 1001 aaPredicted RBP9.11□□□□□ -0.95
TSC1-201ENST00000298552 SLC26A8Q96RN1 970 aa9.11□□□□□ -0.95
TSC1-201ENST00000298552 SALL2Q9Y467 1007 aaPredicted RBP9.11□□□□□ -0.95
TSC1-201ENST00000298552 CCDC146Q8IYE0 955 aa9.1□□□□□ -0.95
TSC1-201ENST00000298552 PMFBP1Q8TBY8 1022 aa9.1□□□□□ -0.95
TSC1-201ENST00000298552 SETSIPP0DME0 302 aa9.1□□□□□ -0.95
TSC1-201ENST00000298552 MAP3K9P80192 1104 aa9.1□□□□□ -0.95
TSC1-201ENST00000298552 OFD1O75665 1012 aa9.1□□□□□ -0.95
TSC1-201ENST00000298552 H3BQV1 296 aa9.1□□□□□ -0.95
TSC1-201ENST00000298552 IFFO2Q5TF58 517 aa9.1□□□□□ -0.95
TSC1-201ENST00000298552 IQCEQ6IPM2 695 aa9.1□□□□□ -0.95
TSC1-201ENST00000298552 EIF3AQ14152 1382 aaKnown RBP9.09□□□□□ -0.95
TSC1-201ENST00000298552 SHTN1A0MZ66 631 aa9.09□□□□□ -0.95
TSC1-201ENST00000298552 FRAT2O75474 233 aaPredicted RBP9.09□□□□□ -0.95
TSC1-201ENST00000298552 ERC1Q8IUD2 1116 aa9.09□□□□□ -0.95
TSC1-201ENST00000298552 RALBP1Q15311 655 aa9.09□□□□□ -0.95
TSC1-201ENST00000298552 GOLGA6L10A0A0M3HER8 536 aa9.09□□□□□ -0.95
TSC1-201ENST00000298552 POLR3GO15318 223 aaPredicted RBP9.09□□□□□ -0.95
TSC1-201ENST00000298552 PIP4K2AP48426 406 aaPredicted RBP9.09□□□□□ -0.95
TSC1-201ENST00000298552 NAT10Q9H0A0 1025 aaKnown RBP9.09□□□□□ -0.95
TSC1-201ENST00000298552 TCHPQ9BT92 498 aa9.09□□□□□ -0.95
TSC1-201ENST00000298552 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.09□□□□□ -0.95
TSC1-201ENST00000298552 GIGYF2Q6Y7W6 1299 aaKnown RBP9.09□□□□□ -0.96
TSC1-201ENST00000298552 ZFYVE27Q5T4F4 411 aa9.08□□□□□ -0.96
TSC1-201ENST00000298552 LEKR1Q6ZMV7 388 aa9.08□□□□□ -0.96
TSC1-201ENST00000298552 MBD3O95983 291 aa9.08□□□□□ -0.96
TSC1-201ENST00000298552 MFAP1P55081 439 aaKnown RBP9.08□□□□□ -0.96
TSC1-201ENST00000298552 TAF3Q5VWG9 929 aa9.08□□□□□ -0.96
TSC1-201ENST00000298552 POGKQ9P215 609 aa9.08□□□□□ -0.96
TSC1-201ENST00000298552 CEP63Q96MT8 703 aa9.08□□□□□ -0.96
TSC1-201ENST00000298552 GOLGA4Q13439 2230 aaKnown RBP9.07□□□□□ -0.96
TSC1-201ENST00000298552 AXDND1Q5T1B0 1012 aaPredicted RBP9.07□□□□□ -0.96
TSC1-201ENST00000298552 CENPQQ7L2Z9 268 aaPredicted RBP9.07□□□□□ -0.96
TSC1-201ENST00000298552 BRMS1Q9HCU9 246 aa9.07□□□□□ -0.96
TSC1-201ENST00000298552 HOMER2Q9NSB8 354 aa9.07□□□□□ -0.96
TSC1-201ENST00000298552 KANK1Q14678 1352 aa9.06□□□□□ -0.96
TSC1-201ENST00000298552 ENOX2Q16206 610 aaKnown RBP9.06□□□□□ -0.96
TSC1-201ENST00000298552 PKNOX2Q96KN3 472 aa9.06□□□□□ -0.96
TSC1-201ENST00000298552 NAP1L1P55209 391 aaKnown RBP9.06□□□□□ -0.96
TSC1-201ENST00000298552 VIMP08670 466 aaKnown RBP9.06□□□□□ -0.96
TSC1-201ENST00000298552 TXLNAP40222 546 aa9.06□□□□□ -0.96
TSC1-201ENST00000298552 GTF2E1P29083 439 aaPredicted RBP9.05□□□□□ -0.96
TSC1-201ENST00000298552 TMCO5BA8MYB1 307 aa9.05□□□□□ -0.96
TSC1-201ENST00000298552 ERLIN1O75477 346 aa9.05□□□□□ -0.96
TSC1-201ENST00000298552 P3H3Q8IVL6 736 aa9.05□□□□□ -0.96
TSC1-201ENST00000298552 OPA1O60313 960 aa9.05□□□□□ -0.96
TSC1-201ENST00000298552 SLU7O95391 586 aaKnown RBP9.05□□□□□ -0.96
TSC1-201ENST00000298552 CAVIN1Q6NZI2 390 aaKnown RBP9.05□□□□□ -0.96
TSC1-201ENST00000298552 CCAR1Q8IX12 1150 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms