RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 PRKRIP1Q9H875 184 aaPredicted RBP20.91■□□□□ 0.94
CNTNAP3-201ENST00000297668 CHMP3Q9Y3E7 222 aa20.91■□□□□ 0.94
CNTNAP3-201ENST00000297668 CCDC18Q5T9S5 1454 aa20.91■□□□□ 0.94
CNTNAP3-201ENST00000297668 TPM4P67936 248 aa20.91■□□□□ 0.94
CNTNAP3-201ENST00000297668 ST18O60284 1047 aa20.9■□□□□ 0.94
CNTNAP3-201ENST00000297668 CENPQQ7L2Z9 268 aaPredicted RBP20.9■□□□□ 0.94
CNTNAP3-201ENST00000297668 PANK3Q9H999 370 aa20.9■□□□□ 0.94
CNTNAP3-201ENST00000297668 NOL8Q76FK4 1167 aaKnown RBP20.9■□□□□ 0.94
CNTNAP3-201ENST00000297668 CCDC34Q96HJ3 373 aa20.9■□□□□ 0.94
CNTNAP3-201ENST00000297668 ARID3AQ99856 593 aa20.89■□□□□ 0.94
CNTNAP3-201ENST00000297668 HSP90B1P14625 803 aaKnown RBP20.89■□□□□ 0.93
CNTNAP3-201ENST00000297668 RRP7AQ9Y3A4 280 aaKnown RBP20.89■□□□□ 0.93
CNTNAP3-201ENST00000297668 TRAK1Q9UPV9 953 aa20.88■□□□□ 0.93
CNTNAP3-201ENST00000297668 NUTM2DQ5VT03 806 aaPredicted RBP20.88■□□□□ 0.93
CNTNAP3-201ENST00000297668 USP35Q9P2H5 1018 aa20.88■□□□□ 0.93
CNTNAP3-201ENST00000297668 WASHC2CQ9Y4E1 1318 aa20.88■□□□□ 0.93
CNTNAP3-201ENST00000297668 PDE4AP27815 886 aa20.88■□□□□ 0.93
CNTNAP3-201ENST00000297668 NGDNQ8NEJ9 315 aaKnown RBP20.87■□□□□ 0.93
CNTNAP3-201ENST00000297668 TAF7LQ5H9L4 462 aa20.87■□□□□ 0.93
CNTNAP3-201ENST00000297668 FAM161AQ3B820 660 aa20.87■□□□□ 0.93
CNTNAP3-201ENST00000297668 AMER1Q5JTC6 1135 aaPredicted RBP20.86■□□□□ 0.93
CNTNAP3-201ENST00000297668 AMPHP49418 695 aa20.86■□□□□ 0.93
CNTNAP3-201ENST00000297668 VSIG10Q8N0Z9 540 aa20.86■□□□□ 0.93
CNTNAP3-201ENST00000297668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.86■□□□□ 0.93
CNTNAP3-201ENST00000297668 ZBED9Q6R2W3 1325 aa20.85■□□□□ 0.93
CNTNAP3-201ENST00000297668 PLIN1O60240 522 aa20.84■□□□□ 0.93
CNTNAP3-201ENST00000297668 RRP1P56182 461 aaKnown RBP20.84■□□□□ 0.93
CNTNAP3-201ENST00000297668 EXOC6Q8TAG9 804 aa20.84■□□□□ 0.93
CNTNAP3-201ENST00000297668 CCDC144AA2RUR9 1427 aa20.84■□□□□ 0.93
CNTNAP3-201ENST00000297668 DDX11L8A8MPP1 907 aa20.83■□□□□ 0.93
CNTNAP3-201ENST00000297668 BCL2L13Q9BXK5 485 aa20.83■□□□□ 0.93
CNTNAP3-201ENST00000297668 E9PSI1 815 aa20.83■□□□□ 0.93
CNTNAP3-201ENST00000297668 PHF14O94880 888 aa20.83■□□□□ 0.92
CNTNAP3-201ENST00000297668 KIF16BQ96L93 1317 aa20.83■□□□□ 0.92
CNTNAP3-201ENST00000297668 ZKSCAN2Q63HK3 967 aa20.81■□□□□ 0.92
CNTNAP3-201ENST00000297668 KIF3AQ9Y496 699 aa20.81■□□□□ 0.92
CNTNAP3-201ENST00000297668 EID1Q9Y6B2 187 aa20.81■□□□□ 0.92
CNTNAP3-201ENST00000297668 CGNL1Q0VF96 1302 aa20.81■□□□□ 0.92
CNTNAP3-201ENST00000297668 ELL2O00472 640 aaPredicted RBP20.8■□□□□ 0.92
CNTNAP3-201ENST00000297668 LTV1Q96GA3 475 aaPredicted RBP20.8■□□□□ 0.92
CNTNAP3-201ENST00000297668 ANKRD45Q5TZF3 282 aa20.79■□□□□ 0.92
CNTNAP3-201ENST00000297668 PODXL2Q9NZ53 605 aa20.79■□□□□ 0.92
CNTNAP3-201ENST00000297668 SLC4A3P48751 1232 aa20.79■□□□□ 0.92
CNTNAP3-201ENST00000297668 FOXD4L5Q5VV16 416 aaPredicted RBP20.79■□□□□ 0.92
CNTNAP3-201ENST00000297668 FOXD4L4Q8WXT5 416 aaPredicted RBP20.79■□□□□ 0.92
CNTNAP3-201ENST00000297668 CRBNQ96SW2 442 aa20.79■□□□□ 0.92
CNTNAP3-201ENST00000297668 TOP2AP11388 1531 aaKnown RBP20.78■□□□□ 0.92
CNTNAP3-201ENST00000297668 JPH4Q96JJ6 628 aa20.78■□□□□ 0.92
CNTNAP3-201ENST00000297668 NUTM2FA1L443 756 aa20.77■□□□□ 0.92
CNTNAP3-201ENST00000297668 COG6Q9Y2V7 657 aa20.77■□□□□ 0.92
CNTNAP3-201ENST00000297668 DDX49Q9Y6V7 483 aaKnown RBP20.77■□□□□ 0.92
CNTNAP3-201ENST00000297668 USP47Q96K76 1375 aa20.77■□□□□ 0.92
CNTNAP3-201ENST00000297668 PKNOX2Q96KN3 472 aa20.76■□□□□ 0.91
CNTNAP3-201ENST00000297668 SF3A1Q15459 793 aaKnown RBP20.76■□□□□ 0.91
CNTNAP3-201ENST00000297668 RASSF8Q8NHQ8 419 aa20.76■□□□□ 0.91
CNTNAP3-201ENST00000297668 NOC3LQ8WTT2 800 aaKnown RBP20.76■□□□□ 0.91
CNTNAP3-201ENST00000297668 CADPSQ9ULU8 1353 aa20.75■□□□□ 0.91
CNTNAP3-201ENST00000297668 RILPL2Q969X0 211 aa20.75■□□□□ 0.91
CNTNAP3-201ENST00000297668 APAF1O14727 1248 aa20.74■□□□□ 0.91
CNTNAP3-201ENST00000297668 GSE1Q14687 1217 aa20.74■□□□□ 0.91
CNTNAP3-201ENST00000297668 TOMM22Q9NS69 142 aa20.73■□□□□ 0.91
CNTNAP3-201ENST00000297668 SKOR2Q2VWA4 1001 aaPredicted RBP20.72■□□□□ 0.91
CNTNAP3-201ENST00000297668 NCBP3Q53F19 620 aaKnown RBP20.72■□□□□ 0.91
CNTNAP3-201ENST00000297668 ATP6V1DQ9Y5K8 247 aa20.72■□□□□ 0.91
CNTNAP3-201ENST00000297668 UACAQ9BZF9 1416 aa20.71■□□□□ 0.91
CNTNAP3-201ENST00000297668 EVC2Q86UK5 1308 aa20.71■□□□□ 0.91
CNTNAP3-201ENST00000297668 VGFO15240 615 aaPredicted RBP20.7■□□□□ 0.9
CNTNAP3-201ENST00000297668 COG3Q96JB2 828 aa20.7■□□□□ 0.9
CNTNAP3-201ENST00000297668 RSPH6AQ9H0K4 717 aa20.7■□□□□ 0.9
CNTNAP3-201ENST00000297668 WIZO95785 1651 aa20.7■□□□□ 0.9
CNTNAP3-201ENST00000297668 TMX4Q9H1E5 349 aaPredicted RBP20.7■□□□□ 0.9
CNTNAP3-201ENST00000297668 CREBRFQ8IUR6 639 aa20.69■□□□□ 0.9
CNTNAP3-201ENST00000297668 NGEFQ8N5V2 710 aa20.69■□□□□ 0.9
CNTNAP3-201ENST00000297668 FANCIQ9NVI1 1328 aa20.68■□□□□ 0.9
CNTNAP3-201ENST00000297668 HSP90AA2PQ14568 343 aaPredicted RBP20.68■□□□□ 0.9
CNTNAP3-201ENST00000297668 H3BQV1 296 aa20.68■□□□□ 0.9
CNTNAP3-201ENST00000297668 IFFO2Q5TF58 517 aa20.68■□□□□ 0.9
CNTNAP3-201ENST00000297668 GOLGA6L1Q8N7Z2 621 aa20.68■□□□□ 0.9
CNTNAP3-201ENST00000297668 DDX19BQ9UMR2 479 aa20.68■□□□□ 0.9
CNTNAP3-201ENST00000297668 TPM3P06753 285 aa20.67■□□□□ 0.9
CNTNAP3-201ENST00000297668 FAM184AQ8NB25 1140 aa20.66■□□□□ 0.9
CNTNAP3-201ENST00000297668 TNNT3P45378 269 aaPredicted RBP20.66■□□□□ 0.9
CNTNAP3-201ENST00000297668 CHMP4CQ96CF2 233 aa20.66■□□□□ 0.9
CNTNAP3-201ENST00000297668 CCDC9Q9Y3X0 531 aaKnown RBP20.66■□□□□ 0.9
CNTNAP3-201ENST00000297668 FRAT2O75474 233 aaPredicted RBP20.66■□□□□ 0.9
CNTNAP3-201ENST00000297668 FOXD4L6Q3SYB3 417 aaPredicted RBP20.65■□□□□ 0.9
CNTNAP3-201ENST00000297668 FOXD4L3Q6VB84 417 aaPredicted RBP20.65■□□□□ 0.9
CNTNAP3-201ENST00000297668 REC8O95072 547 aa20.65■□□□□ 0.9
CNTNAP3-201ENST00000297668 GTF2E1P29083 439 aaPredicted RBP20.64■□□□□ 0.89
CNTNAP3-201ENST00000297668 DIAPH3Q9NSV4 1193 aa20.64■□□□□ 0.89
CNTNAP3-201ENST00000297668 RUSC2Q8N2Y8 1516 aa20.63■□□□□ 0.89
CNTNAP3-201ENST00000297668 GOLGA6L19H0YKK7 550 aa20.63■□□□□ 0.89
CNTNAP3-201ENST00000297668 TEFQ10587 303 aa20.63■□□□□ 0.89
CNTNAP3-201ENST00000297668 DZIP1LQ8IYY4 767 aaKnown RBP20.63■□□□□ 0.89
CNTNAP3-201ENST00000297668 BECN2A8MW95 431 aa20.63■□□□□ 0.89
CNTNAP3-201ENST00000297668 MINK1Q8N4C8 1332 aaPredicted RBP20.62■□□□□ 0.89
CNTNAP3-201ENST00000297668 API5Q9BZZ5 524 aaKnown RBP20.61■□□□□ 0.89
CNTNAP3-201ENST00000297668 DIAPH1O60610 1272 aaKnown RBP20.61■□□□□ 0.89
CNTNAP3-201ENST00000297668 C1orf141Q5JVX7 400 aa20.6■□□□□ 0.89
CNTNAP3-201ENST00000297668 RUFY2Q8WXA3 655 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms