RNA–Protein interactions for RNA: ENST00000296577.8

ABCE1-201, Transcript of ATP binding cassette subfamily E member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCE1, Length 3,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1-201ENST00000296577 BCL11AQ9H165 835 aa12.35□□□□□ -0.43
ABCE1-201ENST00000296577 ANP32AP39687 249 aaKnown RBP12.35□□□□□ -0.43
ABCE1-201ENST00000296577 RCAN3Q9UKA8 241 aa12.35□□□□□ -0.43
ABCE1-201ENST00000296577 NLRP13Q86W25 1043 aa12.34□□□□□ -0.43
ABCE1-201ENST00000296577 ARHGAP5Q13017 1502 aa12.34□□□□□ -0.43
ABCE1-201ENST00000296577 SPAG9O60271 1321 aaKnown RBP12.34□□□□□ -0.43
ABCE1-201ENST00000296577 NEUROD2Q15784 382 aa12.33□□□□□ -0.44
ABCE1-201ENST00000296577 RSPH4AQ5TD94 716 aa12.33□□□□□ -0.44
ABCE1-201ENST00000296577 NUTM2DQ5VT03 806 aaPredicted RBP12.33□□□□□ -0.44
ABCE1-201ENST00000296577 CCDC146Q8IYE0 955 aa12.32□□□□□ -0.44
ABCE1-201ENST00000296577 SPATA31E1Q6ZUB1 1445 aa12.32□□□□□ -0.44
ABCE1-201ENST00000296577 DHX29Q7Z478 1369 aaKnown RBP12.32□□□□□ -0.44
ABCE1-201ENST00000296577 ERICH6BQ5W0A0 696 aa12.31□□□□□ -0.44
ABCE1-201ENST00000296577 GGT6Q6P531 493 aa12.31□□□□□ -0.44
ABCE1-201ENST00000296577 SKAP1Q86WV1 359 aa12.31□□□□□ -0.44
ABCE1-201ENST00000296577 PLEKHH2Q8IVE3 1493 aa12.29□□□□□ -0.44
ABCE1-201ENST00000296577 SAFB2Q14151 953 aaKnown RBP eCLIP12.29□□□□□ -0.44
ABCE1-201ENST00000296577 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.449e-7■■■□□ 19.2
ABCE1-201ENST00000296577 ZBTB47Q9UFB7 747 aaPredicted RBP12.28□□□□□ -0.44
ABCE1-201ENST00000296577 RRP1P56182 461 aaKnown RBP12.28□□□□□ -0.44
ABCE1-201ENST00000296577 NUP160Q12769 1436 aa12.27□□□□□ -0.44
ABCE1-201ENST00000296577 CCDC141Q6ZP82 1450 aa12.27□□□□□ -0.45
ABCE1-201ENST00000296577 ADAMTS8Q9UP79 889 aa12.27□□□□□ -0.45
ABCE1-201ENST00000296577 CANXP27824 592 aaKnown RBP12.26□□□□□ -0.45
ABCE1-201ENST00000296577 RTL5Q5HYW3 569 aaPredicted RBP12.26□□□□□ -0.45
ABCE1-201ENST00000296577 ITSN2Q9NZM3 1697 aa12.26□□□□□ -0.45
ABCE1-201ENST00000296577 ARID4BQ4LE39 1312 aaPredicted RBP12.26□□□□□ -0.45
ABCE1-201ENST00000296577 NOP58Q9Y2X3 529 aaKnown RBP12.25□□□□□ -0.45
ABCE1-201ENST00000296577 DISP3Q9P2K9 1392 aa12.25□□□□□ -0.45
ABCE1-201ENST00000296577 CFAP70Q5T0N1 1121 aa12.25□□□□□ -0.45
ABCE1-201ENST00000296577 SMG6Q86US8 1419 aaKnown RBP12.25□□□□□ -0.45
ABCE1-201ENST00000296577 SYCP2Q9BX26 1530 aa12.24□□□□□ -0.45
ABCE1-201ENST00000296577 PAK3O75914 559 aaPredicted RBP12.24□□□□□ -0.45
ABCE1-201ENST00000296577 DAXXQ9UER7 740 aaPredicted RBP12.24□□□□□ -0.45
ABCE1-201ENST00000296577 TRAK1Q9UPV9 953 aa12.24□□□□□ -0.45
ABCE1-201ENST00000296577 LAS1LQ9Y4W2 734 aaKnown RBP12.24□□□□□ -0.45
ABCE1-201ENST00000296577 BRD4O60885 1362 aaPredicted RBP12.24□□□□□ -0.45
ABCE1-201ENST00000296577 FANCIQ9NVI1 1328 aa12.23□□□□□ -0.45
ABCE1-201ENST00000296577 CRBNQ96SW2 442 aa12.23□□□□□ -0.45
ABCE1-201ENST00000296577 RGS3P49796 1198 aa12.23□□□□□ -0.45
ABCE1-201ENST00000296577 ADGRL2O95490 1459 aa12.22□□□□□ -0.45
ABCE1-201ENST00000296577 BCORL1Q5H9F3 1711 aa12.22□□□□□ -0.45
ABCE1-201ENST00000296577 ABCC10Q5T3U5 1492 aa12.22□□□□□ -0.45
ABCE1-201ENST00000296577 RALGAPBQ86X10 1494 aa12.21□□□□□ -0.45
ABCE1-201ENST00000296577 FAM135AQ9P2D6 1515 aa12.21□□□□□ -0.46
ABCE1-201ENST00000296577 CDCA8Q53HL2 280 aa12.2□□□□□ -0.46
ABCE1-201ENST00000296577 TESK2Q96S53 571 aa12.2□□□□□ -0.46
ABCE1-201ENST00000296577 RRP7AQ9Y3A4 280 aaKnown RBP12.2□□□□□ -0.46
ABCE1-201ENST00000296577 APAF1O14727 1248 aa12.2□□□□□ -0.46
ABCE1-201ENST00000296577 TMEM132EQ6IEE7 984 aa12.2□□□□□ -0.46
ABCE1-201ENST00000296577 STK26Q9P289 416 aa12.2□□□□□ -0.46
ABCE1-201ENST00000296577 KANK1Q14678 1352 aa12.19□□□□□ -0.46
ABCE1-201ENST00000296577 MBD5Q9P267 1494 aa12.19□□□□□ -0.46
ABCE1-201ENST00000296577 FRAT1Q92837 279 aaPredicted RBP12.19□□□□□ -0.46
ABCE1-201ENST00000296577 ERBINQ96RT1 1412 aa12.19□□□□□ -0.46
ABCE1-201ENST00000296577 C20orf194Q5TEA3 1177 aa12.19□□□□□ -0.46
ABCE1-201ENST00000296577 SCAPERQ9BY12 1400 aa12.19□□□□□ -0.46
ABCE1-201ENST00000296577 PER1O15534 1290 aaPredicted RBP12.18□□□□□ -0.46
ABCE1-201ENST00000296577 PPP2R1AP30153 589 aa12.18□□□□□ -0.46
ABCE1-201ENST00000296577 PRAG1Q86YV5 1406 aa12.18□□□□□ -0.46
ABCE1-201ENST00000296577 TRAPPC8Q9Y2L5 1435 aa12.17□□□□□ -0.46
ABCE1-201ENST00000296577 ABCA8O94911 1581 aa12.17□□□□□ -0.46
ABCE1-201ENST00000296577 CDC42BPAQ5VT25 1732 aa12.17□□□□□ -0.46
ABCE1-201ENST00000296577 ADGBQ8N7X0 1667 aa12.16□□□□□ -0.46
ABCE1-201ENST00000296577 GOLGA2Q08379 1002 aa12.16□□□□□ -0.46
ABCE1-201ENST00000296577 PDE3BQ13370 1112 aa12.16□□□□□ -0.46
ABCE1-201ENST00000296577 PDE4AP27815 886 aa12.15□□□□□ -0.46
ABCE1-201ENST00000296577 MORC1Q86VD1 984 aa12.15□□□□□ -0.46
ABCE1-201ENST00000296577 ERCC6L2Q5T890 1561 aa12.15□□□□□ -0.46
ABCE1-201ENST00000296577 KDM5CP41229 1560 aa12.15□□□□□ -0.46
ABCE1-201ENST00000296577 SLC4A3P48751 1232 aa12.15□□□□□ -0.46
ABCE1-201ENST00000296577 UHRF1BP1Q6BDS2 1440 aa12.15□□□□□ -0.46
ABCE1-201ENST00000296577 IPO9Q96P70 1041 aaKnown RBP12.15□□□□□ -0.47
ABCE1-201ENST00000296577 A2MP01023 1474 aa12.14□□□□□ -0.47
ABCE1-201ENST00000296577 STAG3Q9UJ98 1225 aa12.14□□□□□ -0.47
ABCE1-201ENST00000296577 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.14□□□□□ -0.47
ABCE1-201ENST00000296577 DEKP35659 375 aaKnown RBP12.14□□□□□ -0.47
ABCE1-201ENST00000296577 PLPPR3Q6T4P5 718 aa12.14□□□□□ -0.47
ABCE1-201ENST00000296577 ADGRF5Q8IZF2 1346 aa12.13□□□□□ -0.47
ABCE1-201ENST00000296577 SAMD9LQ8IVG5 1584 aa12.13□□□□□ -0.47
ABCE1-201ENST00000296577 BCL2L13Q9BXK5 485 aa12.13□□□□□ -0.47
ABCE1-201ENST00000296577 SHANK2Q9UPX8 1470 aa12.13□□□□□ -0.47
ABCE1-201ENST00000296577 PPM1GO15355 546 aaPredicted RBP12.13□□□□□ -0.47
ABCE1-201ENST00000296577 WASHC2CQ9Y4E1 1318 aa12.13□□□□□ -0.47
ABCE1-201ENST00000296577 SLC12A5Q9H2X9 1139 aa12.12□□□□□ -0.47
ABCE1-201ENST00000296577 PLA2R1Q13018 1463 aa12.12□□□□□ -0.47
ABCE1-201ENST00000296577 TCERG1O14776 1098 aaKnown RBP12.11□□□□□ -0.47
ABCE1-201ENST00000296577 U2SURPO15042 1029 aaKnown RBP12.11□□□□□ -0.47
ABCE1-201ENST00000296577 CLUAP1Q96AJ1 413 aa12.11□□□□□ -0.47
ABCE1-201ENST00000296577 PARD3Q8TEW0 1356 aa12.11□□□□□ -0.47
ABCE1-201ENST00000296577 BCAR3O75815 825 aa12.1□□□□□ -0.47
ABCE1-201ENST00000296577 TTC37Q6PGP7 1564 aa12.1□□□□□ -0.47
ABCE1-201ENST00000296577 MLECQ14165 292 aa12.1□□□□□ -0.47
ABCE1-201ENST00000296577 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.1□□□□□ -0.479e-7■■■■□ 20.2
ABCE1-201ENST00000296577 RAPGEF3O95398 923 aa12.09□□□□□ -0.47
ABCE1-201ENST00000296577 ARHGEF12Q9NZN5 1544 aa12.09□□□□□ -0.47
ABCE1-201ENST00000296577 LRPPRCP42704 1394 aaKnown RBP12.09□□□□□ -0.47
ABCE1-201ENST00000296577 SRPK2P78362 688 aaKnown RBP12.09□□□□□ -0.47
ABCE1-201ENST00000296577 PLCH2O75038 1416 aa12.09□□□□□ -0.47
ABCE1-201ENST00000296577 NEFMP07197 916 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms