RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 CENPJQ9HC77 1338 aaPredicted RBP18.4■□□□□ 0.54
SEC16A-202ENST00000290037 FGD5Q6ZNL6 1462 aa18.4■□□□□ 0.54
SEC16A-202ENST00000290037 DNMBPQ6XZF7 1577 aa18.4■□□□□ 0.54
SEC16A-202ENST00000290037 FRAT1Q92837 279 aaPredicted RBP18.4■□□□□ 0.54
SEC16A-202ENST00000290037 DAPK1P53355 1430 aa18.4■□□□□ 0.54
SEC16A-202ENST00000290037 DHX57Q6P158 1386 aaKnown RBP18.39■□□□□ 0.54
SEC16A-202ENST00000290037 AEBP2Q6ZN18 517 aaPredicted RBP18.39■□□□□ 0.53
SEC16A-202ENST00000290037 U2SURPO15042 1029 aaKnown RBP18.39■□□□□ 0.53
SEC16A-202ENST00000290037 NAP1L5Q96NT1 182 aaPredicted RBP18.39■□□□□ 0.53
SEC16A-202ENST00000290037 EVC2Q86UK5 1308 aa18.39■□□□□ 0.53
SEC16A-202ENST00000290037 EID1Q9Y6B2 187 aa18.39■□□□□ 0.53
SEC16A-202ENST00000290037 GRIN2BQ13224 1484 aa18.39■□□□□ 0.53
SEC16A-202ENST00000290037 VGFO15240 615 aaPredicted RBP18.39■□□□□ 0.53
SEC16A-202ENST00000290037 GOLGA6L1Q8N7Z2 621 aa18.39■□□□□ 0.53
SEC16A-202ENST00000290037 FANCIQ9NVI1 1328 aa18.37■□□□□ 0.53
SEC16A-202ENST00000290037 CFTRP13569 1480 aa18.36■□□□□ 0.53
SEC16A-202ENST00000290037 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
SEC16A-202ENST00000290037 ISY1Q9ULR0 285 aaKnown RBP18.36■□□□□ 0.53
SEC16A-202ENST00000290037 GNL2Q13823 731 aaKnown RBP18.36■□□□□ 0.53
SEC16A-202ENST00000290037 FHOD3Q2V2M9 1422 aa18.36■□□□□ 0.53
SEC16A-202ENST00000290037 BRD4O60885 1362 aaPredicted RBP18.35■□□□□ 0.53
SEC16A-202ENST00000290037 CT47B1P0C2W7 299 aaPredicted RBP18.35■□□□□ 0.53
SEC16A-202ENST00000290037 TIAM1Q13009 1591 aa18.35■□□□□ 0.53
SEC16A-202ENST00000290037 RSPH6AQ9H0K4 717 aa18.35■□□□□ 0.53
SEC16A-202ENST00000290037 SYNJ2O15056 1496 aa18.35■□□□□ 0.53
SEC16A-202ENST00000290037 LAMC3Q9Y6N6 1575 aa18.35■□□□□ 0.53
SEC16A-202ENST00000290037 RGS3P49796 1198 aa18.34■□□□□ 0.53
SEC16A-202ENST00000290037 USP47Q96K76 1375 aa18.34■□□□□ 0.53
SEC16A-202ENST00000290037 MTERF4Q7Z6M4 381 aaKnown RBP18.34■□□□□ 0.53
SEC16A-202ENST00000290037 REC8O95072 547 aa18.34■□□□□ 0.53
SEC16A-202ENST00000290037 CC2D1BQ5T0F9 858 aaKnown RBP18.33■□□□□ 0.53
SEC16A-202ENST00000290037 ITSN2Q9NZM3 1697 aa18.33■□□□□ 0.52
SEC16A-202ENST00000290037 GOLGA6L3A6NEY3 463 aa18.33■□□□□ 0.52
SEC16A-202ENST00000290037 SIN3AQ96ST3 1273 aa18.33■□□□□ 0.52
SEC16A-202ENST00000290037 RBM19Q9Y4C8 960 aaKnown RBP18.32■□□□□ 0.52
SEC16A-202ENST00000290037 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.32■□□□□ 0.52
SEC16A-202ENST00000290037 TMX4Q9H1E5 349 aaPredicted RBP18.31■□□□□ 0.52
SEC16A-202ENST00000290037 IFT140Q96RY7 1462 aa18.3■□□□□ 0.52
SEC16A-202ENST00000290037 RUFY2Q8WXA3 655 aa18.3■□□□□ 0.52
SEC16A-202ENST00000290037 CCDC141Q6ZP82 1450 aa18.3■□□□□ 0.52
SEC16A-202ENST00000290037 PTPRGP23470 1445 aa18.29■□□□□ 0.52
SEC16A-202ENST00000290037 FAM161AQ3B820 660 aa18.29■□□□□ 0.52
SEC16A-202ENST00000290037 TPM3P06753 285 aa18.29■□□□□ 0.52
SEC16A-202ENST00000290037 DDX19BQ9UMR2 479 aa18.28■□□□□ 0.52
SEC16A-202ENST00000290037 DRC7Q8IY82 874 aa18.28■□□□□ 0.52
SEC16A-202ENST00000290037 HOOK1Q9UJC3 728 aaKnown RBP18.28■□□□□ 0.52
SEC16A-202ENST00000290037 LAS1LQ9Y4W2 734 aaKnown RBP18.27■□□□□ 0.52
SEC16A-202ENST00000290037 U2AF1L5P0DN76 240 aaPredicted RBP18.26■□□□□ 0.51
SEC16A-202ENST00000290037 U2AF1Q01081 240 aaKnown RBP eCLIP18.26■□□□□ 0.51
SEC16A-202ENST00000290037 HSP90AB4PQ58FF6 505 aa18.26■□□□□ 0.51
SEC16A-202ENST00000290037 BIVM-ERCC5R4GMW8 1640 aa18.26■□□□□ 0.51
SEC16A-202ENST00000290037 GPS2Q13227 327 aa18.25■□□□□ 0.51
SEC16A-202ENST00000290037 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
SEC16A-202ENST00000290037 ITPRIPQ8IWB1 547 aa18.24■□□□□ 0.51
SEC16A-202ENST00000290037 HSP90B1P14625 803 aaKnown RBP18.24■□□□□ 0.51
SEC16A-202ENST00000290037 CCDC70Q6NSX1 233 aa18.24■□□□□ 0.51
SEC16A-202ENST00000290037 SMC4Q9NTJ3 1288 aa18.24■□□□□ 0.51
SEC16A-202ENST00000290037 NPHP1O15259 732 aa18.23■□□□□ 0.51
SEC16A-202ENST00000290037 TPM1P09493 284 aa18.22■□□□□ 0.51
SEC16A-202ENST00000290037 NCOA2Q15596 1464 aa18.22■□□□□ 0.51
SEC16A-202ENST00000290037 ZNF428Q96B54 188 aa18.22■□□□□ 0.51
SEC16A-202ENST00000290037 ZKSCAN2Q63HK3 967 aa18.22■□□□□ 0.51
SEC16A-202ENST00000290037 API5Q9BZZ5 524 aaKnown RBP18.22■□□□□ 0.51
SEC16A-202ENST00000290037 KIF7Q2M1P5 1343 aa18.22■□□□□ 0.51
SEC16A-202ENST00000290037 MRC2Q9UBG0 1479 aa18.21■□□□□ 0.51
SEC16A-202ENST00000290037 L3MBTL2Q969R5 705 aa18.21■□□□□ 0.51
SEC16A-202ENST00000290037 B4GALNT3Q6L9W6 998 aa18.21■□□□□ 0.51
SEC16A-202ENST00000290037 CPLX2Q6PUV4 134 aaKnown RBP18.21■□□□□ 0.51
SEC16A-202ENST00000290037 MCM2P49736 904 aa18.21■□□□□ 0.5
SEC16A-202ENST00000290037 TDRD9Q8NDG6 1382 aaKnown RBP18.2■□□□□ 0.5
SEC16A-202ENST00000290037 MAP7D2Q96T17 732 aa18.2■□□□□ 0.5
SEC16A-202ENST00000290037 TPM2P07951 284 aa18.19■□□□□ 0.5
SEC16A-202ENST00000290037 KANK4Q5T7N3 995 aaPredicted RBP18.19■□□□□ 0.5
SEC16A-202ENST00000290037 DEKP35659 375 aaKnown RBP18.19■□□□□ 0.5
SEC16A-202ENST00000290037 AKNAQ7Z591 1439 aa18.19■□□□□ 0.5
SEC16A-202ENST00000290037 NEUROD2Q15784 382 aa18.18■□□□□ 0.5
SEC16A-202ENST00000290037 RNF20Q5VTR2 975 aa18.18■□□□□ 0.5
SEC16A-202ENST00000290037 KIF14Q15058 1648 aa18.18■□□□□ 0.5
SEC16A-202ENST00000290037 NUCB2P80303 420 aa18.18■□□□□ 0.5
SEC16A-202ENST00000290037 JPH4Q96JJ6 628 aa18.18■□□□□ 0.5
SEC16A-202ENST00000290037 LETM1O95202 739 aaPredicted RBP18.18■□□□□ 0.5
SEC16A-202ENST00000290037 PRXQ9BXM0 1461 aa18.18■□□□□ 0.5
SEC16A-202ENST00000290037 PRKRIP1Q9H875 184 aaPredicted RBP18.18■□□□□ 0.5
SEC16A-202ENST00000290037 HIRIP3Q9BW71 556 aaPredicted RBP18.17■□□□□ 0.5
SEC16A-202ENST00000290037 ANKRD50Q9ULJ7 1429 aa18.17■□□□□ 0.5
SEC16A-202ENST00000290037 CTTNBP2Q8WZ74 1663 aa18.17■□□□□ 0.5
SEC16A-202ENST00000290037 IQGAP2Q13576 1575 aa18.16■□□□□ 0.5
SEC16A-202ENST00000290037 IGF1RP08069 1367 aa18.16■□□□□ 0.5
SEC16A-202ENST00000290037 SYNJ1O43426 1573 aa18.16■□□□□ 0.5
SEC16A-202ENST00000290037 TSR1Q2NL82 804 aaKnown RBP18.16■□□□□ 0.5
SEC16A-202ENST00000290037 POLA1P09884 1462 aaPredicted RBP18.15■□□□□ 0.5
SEC16A-202ENST00000290037 ANKRD20A12PQ8NF67 263 aa18.15■□□□□ 0.5
SEC16A-202ENST00000290037 RRP1P56182 461 aaKnown RBP18.14■□□□□ 0.5
SEC16A-202ENST00000290037 MFAP1P55081 439 aaKnown RBP18.14■□□□□ 0.49
SEC16A-202ENST00000290037 ARHGAP5Q13017 1502 aa18.14■□□□□ 0.49
SEC16A-202ENST00000290037 ARXQ96QS3 562 aa18.13■□□□□ 0.49
SEC16A-202ENST00000290037 ZKSCAN1P17029 563 aaPredicted RBP18.12■□□□□ 0.49
SEC16A-202ENST00000290037 NEXNQ0ZGT2 675 aa18.12■□□□□ 0.49
SEC16A-202ENST00000290037 DDX58O95786 925 aaKnown RBP18.12■□□□□ 0.49
SEC16A-202ENST00000290037 HIP1O00291 1037 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms