RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 HOMER1Q86YM7 354 aa11.21□□□□□ -0.62
SMC2-201ENST00000286398 CENPJQ9HC77 1338 aaPredicted RBP11.21□□□□□ -0.62
SMC2-201ENST00000286398 MAPK8IP2Q13387 824 aaPredicted RBP11.21□□□□□ -0.62
SMC2-201ENST00000286398 RDXP35241 583 aaKnown RBP11.2□□□□□ -0.62
SMC2-201ENST00000286398 GORABQ5T7V8 394 aa11.2□□□□□ -0.62
SMC2-201ENST00000286398 HSP90AB3PQ58FF7 597 aa11.2□□□□□ -0.62
SMC2-201ENST00000286398 H3BQV1 296 aa11.19□□□□□ -0.62
SMC2-201ENST00000286398 IFFO2Q5TF58 517 aa11.19□□□□□ -0.62
SMC2-201ENST00000286398 STK31Q9BXU1 1019 aa11.19□□□□□ -0.62
SMC2-201ENST00000286398 CHMP5Q9NZZ3 219 aa11.19□□□□□ -0.62
SMC2-201ENST00000286398 R3HCC1Q9Y3T6 440 aaKnown RBP11.19□□□□□ -0.62
SMC2-201ENST00000286398 ARGLU1Q9NWB6 273 aaPredicted RBP11.19□□□□□ -0.62
SMC2-201ENST00000286398 IPO7O95373 1038 aaKnown RBP11.18□□□□□ -0.62
SMC2-201ENST00000286398 CCDC66A2RUB6 948 aa11.18□□□□□ -0.62
SMC2-201ENST00000286398 H0YHG0 523 aa11.17□□□□□ -0.62
SMC2-201ENST00000286398 BCL11BQ9C0K0 894 aaPredicted RBP11.17□□□□□ -0.62
SMC2-201ENST00000286398 DIAPH3Q9NSV4 1193 aa11.17□□□□□ -0.62
SMC2-201ENST00000286398 HDAC5Q9UQL6 1122 aa11.17□□□□□ -0.62
SMC2-201ENST00000286398 FAM184AQ8NB25 1140 aa11.17□□□□□ -0.62
SMC2-201ENST00000286398 HSP90B2PQ58FF3 399 aa11.17□□□□□ -0.62
SMC2-201ENST00000286398 NLRP13Q86W25 1043 aa11.17□□□□□ -0.62
SMC2-201ENST00000286398 SAFB2Q14151 953 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMC2-201ENST00000286398 MNS1Q8NEH6 495 aa11.16□□□□□ -0.62
SMC2-201ENST00000286398 CHMP4AQ9BY43 222 aa11.16□□□□□ -0.62
SMC2-201ENST00000286398 SLC4A10Q6U841 1118 aa11.16□□□□□ -0.62
SMC2-201ENST00000286398 STK11IPQ8N1F8 1099 aa11.16□□□□□ -0.62
SMC2-201ENST00000286398 CCDC191Q8NCU4 936 aa11.16□□□□□ -0.62
SMC2-201ENST00000286398 EXOC6Q8TAG9 804 aa11.16□□□□□ -0.62
SMC2-201ENST00000286398 CWC15Q9P013 229 aaKnown RBP11.16□□□□□ -0.62
SMC2-201ENST00000286398 ACBD3Q9H3P7 528 aa11.16□□□□□ -0.62
SMC2-201ENST00000286398 IFT57Q9NWB7 429 aa11.15□□□□□ -0.62
SMC2-201ENST00000286398 NFKBIBQ15653 356 aa11.15□□□□□ -0.62
SMC2-201ENST00000286398 MRE11P49959 708 aa11.14□□□□□ -0.63
SMC2-201ENST00000286398 TPM2P07951 284 aa11.14□□□□□ -0.63
SMC2-201ENST00000286398 RUFY1Q96T51 708 aa11.14□□□□□ -0.63
SMC2-201ENST00000286398 TOMM22Q9NS69 142 aa11.14□□□□□ -0.63
SMC2-201ENST00000286398 HDGFL2Q7Z4V5 671 aaPredicted RBP11.14□□□□□ -0.63
SMC2-201ENST00000286398 MEX3CQ5U5Q3 659 aaKnown RBP11.14□□□□□ -0.63
SMC2-201ENST00000286398 CCDC146Q8IYE0 955 aa11.14□□□□□ -0.63
SMC2-201ENST00000286398 SETD5Q9C0A6 1442 aa11.14□□□□□ -0.63
SMC2-201ENST00000286398 CDR1P51861 262 aa11.13□□□□□ -0.63
SMC2-201ENST00000286398 CHMP3Q9Y3E7 222 aa11.13□□□□□ -0.63
SMC2-201ENST00000286398 ANKRD45Q5TZF3 282 aa11.13□□□□□ -0.63
SMC2-201ENST00000286398 AK7Q96M32 723 aa11.13□□□□□ -0.63
SMC2-201ENST00000286398 PLIN1O60240 522 aa11.13□□□□□ -0.63
SMC2-201ENST00000286398 MARCH6O60337 910 aa11.13□□□□□ -0.63
SMC2-201ENST00000286398 RILPL2Q969X0 211 aa11.13□□□□□ -0.63
SMC2-201ENST00000286398 CHMP4CQ96CF2 233 aa11.13□□□□□ -0.63
SMC2-201ENST00000286398 MCTP1Q6DN14 999 aa11.12□□□□□ -0.63
SMC2-201ENST00000286398 ZNF330Q9Y3S2 320 aaPredicted RBP11.12□□□□□ -0.63
SMC2-201ENST00000286398 RRP1P56182 461 aaKnown RBP11.12□□□□□ -0.63
SMC2-201ENST00000286398 RBM10P98175 930 aaKnown RBP11.12□□□□□ -0.63
SMC2-201ENST00000286398 SPAG9O60271 1321 aaKnown RBP11.12□□□□□ -0.63
SMC2-201ENST00000286398 BRPF3Q9ULD4 1205 aa11.12□□□□□ -0.63
SMC2-201ENST00000286398 SCRIBQ14160 1630 aa11.12□□□□□ -0.63
SMC2-201ENST00000286398 BICD2Q8TD16 824 aa11.11□□□□□ -0.63
SMC2-201ENST00000286398 CRBNQ96SW2 442 aa11.11□□□□□ -0.63
SMC2-201ENST00000286398 CEP164Q9UPV0 1460 aa11.11□□□□□ -0.63
SMC2-201ENST00000286398 NASPP49321 788 aaPredicted RBP11.11□□□□□ -0.63
SMC2-201ENST00000286398 IL27Q8NEV9 243 aa11.1□□□□□ -0.63
SMC2-201ENST00000286398 ANKRD20A12PQ8NF67 263 aa11.1□□□□□ -0.63
SMC2-201ENST00000286398 PCMTD1Q96MG8 357 aaPredicted RBP11.1□□□□□ -0.63
SMC2-201ENST00000286398 CCDC39Q9UFE4 941 aa11.1□□□□□ -0.63
SMC2-201ENST00000286398 CGNL1Q0VF96 1302 aa11.1□□□□□ -0.63
SMC2-201ENST00000286398 NUCB2P80303 420 aa11.1□□□□□ -0.63
SMC2-201ENST00000286398 PKD2Q13563 968 aa11.1□□□□□ -0.63
SMC2-201ENST00000286398 PHLDB1Q86UU1 1377 aa11.09□□□□□ -0.63
SMC2-201ENST00000286398 REC8O95072 547 aa11.09□□□□□ -0.63
SMC2-201ENST00000286398 FOXD1Q16676 465 aa11.09□□□□□ -0.63
SMC2-201ENST00000286398 WWC1Q8IX03 1113 aa11.09□□□□□ -0.63
SMC2-201ENST00000286398 SASS6Q6UVJ0 657 aa11.09□□□□□ -0.63
SMC2-201ENST00000286398 AEBP1Q8IUX7 1158 aa11.09□□□□□ -0.63
SMC2-201ENST00000286398 BCL2L13Q9BXK5 485 aa11.09□□□□□ -0.63
SMC2-201ENST00000286398 ROCK2O75116 1388 aaKnown RBP11.08□□□□□ -0.64
SMC2-201ENST00000286398 CPLX2Q6PUV4 134 aaKnown RBP11.08□□□□□ -0.64
SMC2-201ENST00000286398 COG6Q9Y2V7 657 aa11.08□□□□□ -0.64
SMC2-201ENST00000286398 HMGN5P82970 282 aaKnown RBP11.08□□□□□ -0.64
SMC2-201ENST00000286398 STK26Q9P289 416 aa11.08□□□□□ -0.64
SMC2-201ENST00000286398 DCTN1Q14203 1278 aa11.07□□□□□ -0.64
SMC2-201ENST00000286398 AKAP17AQ02040 695 aaKnown RBP11.07□□□□□ -0.64
SMC2-201ENST00000286398 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.07□□□□□ -0.64
SMC2-201ENST00000286398 DHX37Q8IY37 1157 aaKnown RBP11.07□□□□□ -0.64
SMC2-201ENST00000286398 RNF214Q8ND24 703 aa11.07□□□□□ -0.64
SMC2-201ENST00000286398 ZBED9Q6R2W3 1325 aa11.07□□□□□ -0.64
SMC2-201ENST00000286398 ZKSCAN2Q63HK3 967 aa11.06□□□□□ -0.64
SMC2-201ENST00000286398 VPS53Q5VIR6 699 aa11.06□□□□□ -0.64
SMC2-201ENST00000286398 LMOD3Q0VAK6 560 aa11.06□□□□□ -0.64
SMC2-201ENST00000286398 SKIDA1Q1XH10 827 aa11.06□□□□□ -0.64
SMC2-201ENST00000286398 TSPYL1Q9H0U9 437 aa11.06□□□□□ -0.64
SMC2-201ENST00000286398 VPS37CA5D8V6 355 aaPredicted RBP11.06□□□□□ -0.64
SMC2-201ENST00000286398 ZKSCAN1P17029 563 aaPredicted RBP11.06□□□□□ -0.64
SMC2-201ENST00000286398 ERCC4Q92889 916 aaPredicted RBP11.05□□□□□ -0.64
SMC2-201ENST00000286398 KANK1Q14678 1352 aa11.05□□□□□ -0.64
SMC2-201ENST00000286398 LEKR1Q6ZMV7 388 aa11.05□□□□□ -0.64
SMC2-201ENST00000286398 HOOK1Q9UJC3 728 aaKnown RBP11.05□□□□□ -0.64
SMC2-201ENST00000286398 RRP7AQ9Y3A4 280 aaKnown RBP11.05□□□□□ -0.64
SMC2-201ENST00000286398 TRAK2O60296 914 aa11.04□□□□□ -0.64
SMC2-201ENST00000286398 CCDC73Q6ZRK6 1079 aa11.04□□□□□ -0.64
SMC2-201ENST00000286398 CCDC47Q96A33 483 aaKnown RBP11.04□□□□□ -0.64
SMC2-201ENST00000286398 RUFY2Q8WXA3 655 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms