RNA–Protein interactions for RNA: ENST00000282641.6

A1CF-201, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene A1CF, Length 9,350 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-201ENST00000282641 TPM1P09493 284 aa10.74□□□□□ -0.69
A1CF-201ENST00000282641 RCAN3Q9UKA8 241 aa10.74□□□□□ -0.69
A1CF-201ENST00000282641 TUBB4BP68371 445 aa10.74□□□□□ -0.69
A1CF-201ENST00000282641 KIF21AQ7Z4S6 1674 aa10.73□□□□□ -0.69
A1CF-201ENST00000282641 AQRO60306 1485 aaKnown RBP eCLIP10.73□□□□□ -0.694e-7■■■□□ 15.4
A1CF-201ENST00000282641 CHMP4AQ9BY43 222 aa10.73□□□□□ -0.69
A1CF-201ENST00000282641 PPP1R15AO75807 674 aaPredicted RBP10.73□□□□□ -0.69
A1CF-201ENST00000282641 CAMSAP2Q08AD1 1489 aa10.73□□□□□ -0.69
A1CF-201ENST00000282641 MCCP23508 829 aa10.73□□□□□ -0.69
A1CF-201ENST00000282641 APPP05067 770 aa10.72□□□□□ -0.69
A1CF-201ENST00000282641 SSR1P43307 286 aaKnown RBP10.72□□□□□ -0.69
A1CF-201ENST00000282641 RBM25P49756 843 aaKnown RBP10.72□□□□□ -0.69
A1CF-201ENST00000282641 NFKBIBQ15653 356 aa10.72□□□□□ -0.69
A1CF-201ENST00000282641 NUCB2P80303 420 aa10.72□□□□□ -0.69
A1CF-201ENST00000282641 GABPB1Q06547 395 aaPredicted RBP10.71□□□□□ -0.69
A1CF-201ENST00000282641 ITGAEP38570 1179 aa10.71□□□□□ -0.69
A1CF-201ENST00000282641 IBTKQ9P2D0 1353 aaPredicted RBP10.71□□□□□ -0.69
A1CF-201ENST00000282641 ZRSR1Q15695 479 aaKnown RBP10.71□□□□□ -0.7
A1CF-201ENST00000282641 ZMYND15Q9H091 742 aa10.71□□□□□ -0.7
A1CF-201ENST00000282641 KNSTRNQ9Y448 316 aa10.71□□□□□ -0.7
A1CF-201ENST00000282641 KIF7Q2M1P5 1343 aa10.71□□□□□ -0.7
A1CF-201ENST00000282641 MYBBP1AQ9BQG0 1328 aaKnown RBP10.71□□□□□ -0.7
A1CF-201ENST00000282641 FEZ1Q99689 392 aa10.71□□□□□ -0.7
A1CF-201ENST00000282641 CT47B1P0C2W7 299 aaPredicted RBP10.7□□□□□ -0.7
A1CF-201ENST00000282641 SMARCA4P51532 1647 aa10.7□□□□□ -0.7
A1CF-201ENST00000282641 POLR3GO15318 223 aaPredicted RBP10.7□□□□□ -0.7
A1CF-201ENST00000282641 HFM1A2PYH4 1435 aa10.69□□□□□ -0.7
A1CF-201ENST00000282641 TPM4P67936 248 aa10.69□□□□□ -0.7
A1CF-201ENST00000282641 ANO8Q9HCE9 1232 aaPredicted RBP10.69□□□□□ -0.7
A1CF-201ENST00000282641 PLEKHH1Q9ULM0 1364 aa10.69□□□□□ -0.7
A1CF-201ENST00000282641 RRP1P56182 461 aaKnown RBP10.69□□□□□ -0.7
A1CF-201ENST00000282641 SALL2Q9Y467 1007 aaPredicted RBP10.69□□□□□ -0.7
A1CF-201ENST00000282641 BACH2Q9BYV9 841 aa10.68□□□□□ -0.7
A1CF-201ENST00000282641 YEATS2Q9ULM3 1422 aa10.68□□□□□ -0.7
A1CF-201ENST00000282641 AK7Q96M32 723 aa10.68□□□□□ -0.7
A1CF-201ENST00000282641 FAM9BQ8IZU0 186 aa10.68□□□□□ -0.7
A1CF-201ENST00000282641 TIAM1Q13009 1591 aa10.68□□□□□ -0.7
A1CF-201ENST00000282641 PEG3Q9GZU2 1588 aa10.68□□□□□ -0.7
A1CF-201ENST00000282641 CCDC7Q96M83 1385 aa10.67□□□□□ -0.7
A1CF-201ENST00000282641 SASS6Q6UVJ0 657 aa10.67□□□□□ -0.7
A1CF-201ENST00000282641 CCDC34Q96HJ3 373 aa10.67□□□□□ -0.7
A1CF-201ENST00000282641 HSP90AB1P08238 724 aaKnown RBP10.67□□□□□ -0.7
A1CF-201ENST00000282641 HSPA5P11021 654 aaKnown RBP10.67□□□□□ -0.7
A1CF-201ENST00000282641 GOLGA6L4A6NEF3 574 aa10.66□□□□□ -0.7
A1CF-201ENST00000282641 IPO8O15397 1037 aaKnown RBP10.66□□□□□ -0.7
A1CF-201ENST00000282641 BCL11BQ9C0K0 894 aaPredicted RBP10.66□□□□□ -0.7
A1CF-201ENST00000282641 NCOA2Q15596 1464 aa10.66□□□□□ -0.7
A1CF-201ENST00000282641 HMGB1P1B2RPK0 211 aaPredicted RBP10.66□□□□□ -0.7
A1CF-201ENST00000282641 ZNF622Q969S3 477 aaKnown RBP eCLIP10.66□□□□□ -0.7
A1CF-201ENST00000282641 CCDC94Q9BW85 323 aaPredicted RBP10.66□□□□□ -0.7
A1CF-201ENST00000282641 RTN4Q9NQC3 1192 aaKnown RBP10.66□□□□□ -0.7
A1CF-201ENST00000282641 V9GYY5 206 aaPredicted RBP10.66□□□□□ -0.7
A1CF-201ENST00000282641 CEP120Q8N960 986 aa10.66□□□□□ -0.7
A1CF-201ENST00000282641 NBPF1Q3BBV0 1214 aa10.66□□□□□ -0.7
A1CF-201ENST00000282641 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.65□□□□□ -0.7
A1CF-201ENST00000282641 SYNJ1O43426 1573 aa10.65□□□□□ -0.7
A1CF-201ENST00000282641 SH3BGRP55822 239 aaPredicted RBP10.65□□□□□ -0.7
A1CF-201ENST00000282641 NASPP49321 788 aaPredicted RBP10.65□□□□□ -0.7
A1CF-201ENST00000282641 MCM2P49736 904 aa10.65□□□□□ -0.7
A1CF-201ENST00000282641 CFAP53Q96M91 514 aa10.65□□□□□ -0.7
A1CF-201ENST00000282641 DEF6Q9H4E7 631 aa10.65□□□□□ -0.7
A1CF-201ENST00000282641 POLR1AO95602 1720 aaPredicted RBP10.65□□□□□ -0.71
A1CF-201ENST00000282641 ABCA5Q8WWZ7 1642 aa10.64□□□□□ -0.71
A1CF-201ENST00000282641 IRX3P78415 501 aaPredicted RBP10.64□□□□□ -0.71
A1CF-201ENST00000282641 ZNF771Q7L3S4 317 aaPredicted RBP10.64□□□□□ -0.71
A1CF-201ENST00000282641 U2SURPO15042 1029 aaKnown RBP10.64□□□□□ -0.71
A1CF-201ENST00000282641 ERCC4Q92889 916 aaPredicted RBP10.64□□□□□ -0.71
A1CF-201ENST00000282641 NEMFO60524 1076 aa10.64□□□□□ -0.71
A1CF-201ENST00000282641 EHBP1L1Q8N3D4 1523 aa10.64□□□□□ -0.71
A1CF-201ENST00000282641 NUTM1Q86Y26 1132 aa10.64□□□□□ -0.71
A1CF-201ENST00000282641 ST18O60284 1047 aa10.63□□□□□ -0.71
A1CF-201ENST00000282641 MFAP1P55081 439 aaKnown RBP10.63□□□□□ -0.71
A1CF-201ENST00000282641 AMER1Q5JTC6 1135 aaPredicted RBP10.63□□□□□ -0.71
A1CF-201ENST00000282641 B4GALNT3Q6L9W6 998 aa10.63□□□□□ -0.71
A1CF-201ENST00000282641 PRKRIP1Q9H875 184 aaPredicted RBP10.63□□□□□ -0.71
A1CF-201ENST00000282641 CFAP43Q8NDM7 1665 aa10.63□□□□□ -0.71
A1CF-201ENST00000282641 UHRF1BP1LA0JNW5 1464 aa10.62□□□□□ -0.71
A1CF-201ENST00000282641 NEFHP12036 1026 aa10.62□□□□□ -0.71
A1CF-201ENST00000282641 CC2D1BQ5T0F9 858 aaKnown RBP10.62□□□□□ -0.71
A1CF-201ENST00000282641 TUBBP07437 444 aa10.62□□□□□ -0.71
A1CF-201ENST00000282641 SUPT6HQ7KZ85 1726 aaKnown RBP10.62□□□□□ -0.71
A1CF-201ENST00000282641 A6NNZ2 444 aa10.62□□□□□ -0.71
A1CF-201ENST00000282641 RABEP1Q15276 862 aa10.62□□□□□ -0.71
A1CF-201ENST00000282641 TUBB8Q3ZCM7 444 aa10.62□□□□□ -0.71
A1CF-201ENST00000282641 CGNQ9P2M7 1197 aaKnown RBP10.61□□□□□ -0.71
A1CF-201ENST00000282641 KIAA1211Q6ZU35 1233 aa10.61□□□□□ -0.71
A1CF-201ENST00000282641 TOP2BQ02880 1626 aa10.61□□□□□ -0.71
A1CF-201ENST00000282641 TIGD1Q96MW7 591 aa10.61□□□□□ -0.71
A1CF-201ENST00000282641 REREQ9P2R6 1566 aa10.61□□□□□ -0.71
A1CF-201ENST00000282641 ARHGEF12Q9NZN5 1544 aa10.61□□□□□ -0.71
A1CF-201ENST00000282641 CLSTN1O94985 981 aa10.6□□□□□ -0.71
A1CF-201ENST00000282641 IPO4Q8TEX9 1081 aaKnown RBP10.6□□□□□ -0.71
A1CF-201ENST00000282641 FHOD3Q2V2M9 1422 aa10.6□□□□□ -0.71
A1CF-201ENST00000282641 IVLP07476 585 aa10.6□□□□□ -0.71
A1CF-201ENST00000282641 CWC22Q9HCG8 908 aaKnown RBP10.6□□□□□ -0.71
A1CF-201ENST00000282641 RPAINQ86UA6 219 aa10.59□□□□□ -0.71
A1CF-201ENST00000282641 FRAT1Q92837 279 aaPredicted RBP10.59□□□□□ -0.71
A1CF-201ENST00000282641 CFAP65Q6ZU64 1925 aaKnown RBP10.59□□□□□ -0.71
A1CF-201ENST00000282641 HDAC5Q9UQL6 1122 aa10.59□□□□□ -0.71
A1CF-201ENST00000282641 OFD1O75665 1012 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms