RNA–Protein interactions for RNA: ENST00000269829.5

ZNF544-201, Transcript of zinc finger protein 544, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF544, Length 3,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-201ENST00000269829 SHANK2Q9UPX8 1470 aa11.59□□□□□ -0.55
ZNF544-201ENST00000269829 ANP32CO43423 234 aa11.59□□□□□ -0.55
ZNF544-201ENST00000269829 CARD11Q9BXL7 1154 aa11.58□□□□□ -0.56
ZNF544-201ENST00000269829 CROCC2H7BZ55 1655 aa11.57□□□□□ -0.56
ZNF544-201ENST00000269829 RPRD2Q5VT52 1461 aaKnown RBP11.57□□□□□ -0.56
ZNF544-201ENST00000269829 ARHGEF5Q12774 1597 aa11.56□□□□□ -0.56
ZNF544-201ENST00000269829 CCDC144AA2RUR9 1427 aa11.56□□□□□ -0.56
ZNF544-201ENST00000269829 NEO1Q92859 1461 aa11.55□□□□□ -0.56
ZNF544-201ENST00000269829 TEX14Q8IWB6 1497 aa11.55□□□□□ -0.56
ZNF544-201ENST00000269829 ZMYM4Q5VZL5 1548 aa11.54□□□□□ -0.56
ZNF544-201ENST00000269829 FAM135AQ9P2D6 1515 aa11.53□□□□□ -0.56
ZNF544-201ENST00000269829 ABCC1P33527 1531 aa11.53□□□□□ -0.56
ZNF544-201ENST00000269829 C11orf95C9JLR9 678 aaPredicted RBP11.53□□□□□ -0.56
ZNF544-201ENST00000269829 MLECQ14165 292 aa11.53□□□□□ -0.56
ZNF544-201ENST00000269829 KANK1Q14678 1352 aa11.52□□□□□ -0.57
ZNF544-201ENST00000269829 WASHC2AQ641Q2 1341 aa11.52□□□□□ -0.57
ZNF544-201ENST00000269829 GTF3C3Q9Y5Q9 886 aa11.51□□□□□ -0.57
ZNF544-201ENST00000269829 REREQ9P2R6 1566 aa11.51□□□□□ -0.57
ZNF544-201ENST00000269829 RICTORQ6R327 1708 aa11.51□□□□□ -0.57
ZNF544-201ENST00000269829 SCAF1Q9H7N4 1312 aaKnown RBP11.51□□□□□ -0.57
ZNF544-201ENST00000269829 BCORL1Q5H9F3 1711 aa11.51□□□□□ -0.57
ZNF544-201ENST00000269829 NBPF1Q3BBV0 1214 aa11.5□□□□□ -0.57
ZNF544-201ENST00000269829 PLPPR3Q6T4P5 718 aa11.5□□□□□ -0.57
ZNF544-201ENST00000269829 DUOX2Q9NRD8 1548 aa11.49□□□□□ -0.57
ZNF544-201ENST00000269829 WASHC2CQ9Y4E1 1318 aa11.49□□□□□ -0.57
ZNF544-201ENST00000269829 ROCK2O75116 1388 aaKnown RBP11.49□□□□□ -0.57
ZNF544-201ENST00000269829 KDM5CP41229 1560 aa11.49□□□□□ -0.57
ZNF544-201ENST00000269829 ST20-MTHFSA0A0A6YYL1 179 aa11.49□□□□□ -0.57
ZNF544-201ENST00000269829 NUTM2DQ5VT03 806 aaPredicted RBP11.49□□□□□ -0.57
ZNF544-201ENST00000269829 USP47Q96K76 1375 aa11.49□□□□□ -0.57
ZNF544-201ENST00000269829 MAST1Q9Y2H9 1570 aa11.49□□□□□ -0.57
ZNF544-201ENST00000269829 FRMPD1Q5SYB0 1578 aa11.48□□□□□ -0.57
ZNF544-201ENST00000269829 SENP3-EIF4A1A0A087X0R7 540 aa11.47□□□□□ -0.57
ZNF544-201ENST00000269829 ATP7AQ04656 1500 aa11.47□□□□□ -0.57
ZNF544-201ENST00000269829 ERBINQ96RT1 1412 aa11.46□□□□□ -0.57
ZNF544-201ENST00000269829 KIF7Q2M1P5 1343 aa11.45□□□□□ -0.58
ZNF544-201ENST00000269829 DHX29Q7Z478 1369 aaKnown RBP11.45□□□□□ -0.58
ZNF544-201ENST00000269829 TRHP20396 242 aaPredicted RBP11.45□□□□□ -0.58
ZNF544-201ENST00000269829 ZNF518AQ6AHZ1 1483 aa11.44□□□□□ -0.58
ZNF544-201ENST00000269829 ZFYVE16Q7Z3T8 1539 aa11.44□□□□□ -0.58
ZNF544-201ENST00000269829 CCDC7Q96M83 1385 aa11.43□□□□□ -0.58
ZNF544-201ENST00000269829 FAM9BQ8IZU0 186 aa11.43□□□□□ -0.58
ZNF544-201ENST00000269829 MAGI2Q86UL8 1455 aa11.43□□□□□ -0.58
ZNF544-201ENST00000269829 RTEL1-TNFRSF6BF6WH68 1400 aa11.43□□□□□ -0.58
ZNF544-201ENST00000269829 ARID4BQ4LE39 1312 aaPredicted RBP11.42□□□□□ -0.58
ZNF544-201ENST00000269829 INO80Q9ULG1 1556 aaPredicted RBP11.42□□□□□ -0.58
ZNF544-201ENST00000269829 PLA2R1Q13018 1463 aa11.42□□□□□ -0.58
ZNF544-201ENST00000269829 CFAP65Q6ZU64 1925 aaKnown RBP11.42□□□□□ -0.58
ZNF544-201ENST00000269829 PLXNC1O60486 1568 aa11.42□□□□□ -0.58
ZNF544-201ENST00000269829 A2MP01023 1474 aa11.41□□□□□ -0.58
ZNF544-201ENST00000269829 POGZQ7Z3K3 1410 aa11.41□□□□□ -0.58
ZNF544-201ENST00000269829 TSPOAP1O95153 1857 aa11.41□□□□□ -0.58
ZNF544-201ENST00000269829 STAG3Q9UJ98 1225 aa11.4□□□□□ -0.58
ZNF544-201ENST00000269829 MRS2Q9HD23 443 aa11.4□□□□□ -0.58
ZNF544-201ENST00000269829 ARHGEF40Q8TER5 1519 aa11.39□□□□□ -0.59
ZNF544-201ENST00000269829 KDM5DQ9BY66 1539 aa11.39□□□□□ -0.59
ZNF544-201ENST00000269829 ESF1Q9H501 851 aaKnown RBP11.39□□□□□ -0.59
ZNF544-201ENST00000269829 HNRNPUQ00839 825 aaKnown RBP eCLIP11.39□□□□□ -0.59
ZNF544-201ENST00000269829 YEATS2Q9ULM3 1422 aa11.39□□□□□ -0.59
ZNF544-201ENST00000269829 CCDC184Q52MB2 194 aa11.38□□□□□ -0.59
ZNF544-201ENST00000269829 CFAP70Q5T0N1 1121 aa11.38□□□□□ -0.59
ZNF544-201ENST00000269829 EIF2AK4Q9P2K8 1649 aaKnown RBP11.37□□□□□ -0.59
ZNF544-201ENST00000269829 UNC13BO14795 1591 aa11.37□□□□□ -0.59
ZNF544-201ENST00000269829 HECW2Q9P2P5 1572 aa11.37□□□□□ -0.59
ZNF544-201ENST00000269829 UGGT1Q9NYU2 1555 aa11.36□□□□□ -0.59
ZNF544-201ENST00000269829 MLH3Q9UHC1 1453 aa11.35□□□□□ -0.59
ZNF544-201ENST00000269829 SAFB2Q14151 953 aaKnown RBP eCLIP11.35□□□□□ -0.591e-6■■□□□ 12.4
ZNF544-201ENST00000269829 FBXO31Q5XUX0 539 aaPredicted RBP11.35□□□□□ -0.59
ZNF544-201ENST00000269829 CNTLNQ9NXG0 1405 aa11.35□□□□□ -0.59
ZNF544-201ENST00000269829 IQGAP3Q86VI3 1631 aa11.35□□□□□ -0.59
ZNF544-201ENST00000269829 PRAG1Q86YV5 1406 aa11.35□□□□□ -0.59
ZNF544-201ENST00000269829 ATP10AO60312 1499 aa11.34□□□□□ -0.59
ZNF544-201ENST00000269829 ADGRF5Q8IZF2 1346 aa11.34□□□□□ -0.59
ZNF544-201ENST00000269829 PRKRIP1Q9H875 184 aaPredicted RBP11.34□□□□□ -0.59
ZNF544-201ENST00000269829 AGLP35573 1532 aa11.34□□□□□ -0.59
ZNF544-201ENST00000269829 TMEM132EQ6IEE7 984 aa11.34□□□□□ -0.59
ZNF544-201ENST00000269829 CC2D1BQ5T0F9 858 aaKnown RBP11.34□□□□□ -0.59
ZNF544-201ENST00000269829 KIDINS220Q9ULH0 1771 aa11.34□□□□□ -0.59
ZNF544-201ENST00000269829 CCER2I3L3R5 266 aa11.33□□□□□ -0.6
ZNF544-201ENST00000269829 TRAK1Q9UPV9 953 aa11.33□□□□□ -0.6
ZNF544-201ENST00000269829 RALGAPBQ86X10 1494 aa11.33□□□□□ -0.6
ZNF544-201ENST00000269829 SPATA31E1Q6ZUB1 1445 aa11.33□□□□□ -0.6
ZNF544-201ENST00000269829 BCANQ96GW7 911 aa11.32□□□□□ -0.6
ZNF544-201ENST00000269829 STK26Q9P289 416 aa11.32□□□□□ -0.6
ZNF544-201ENST00000269829 TMF1P82094 1093 aa11.32□□□□□ -0.6
ZNF544-201ENST00000269829 E9PCH4 1651 aa11.31□□□□□ -0.6
ZNF544-201ENST00000269829 UHRF1BP1Q6BDS2 1440 aa11.31□□□□□ -0.6
ZNF544-201ENST00000269829 SALL2Q9Y467 1007 aaPredicted RBP11.31□□□□□ -0.6
ZNF544-201ENST00000269829 RNF17Q9BXT8 1623 aaKnown RBP11.31□□□□□ -0.6
ZNF544-201ENST00000269829 TMC1Q8TDI8 760 aa11.3□□□□□ -0.6
ZNF544-201ENST00000269829 IDI1Q13907 227 aa11.3□□□□□ -0.6
ZNF544-201ENST00000269829 MROH2AA6NES4 1674 aa11.3□□□□□ -0.6
ZNF544-201ENST00000269829 DEPDC5O75140 1603 aa11.3□□□□□ -0.6
ZNF544-201ENST00000269829 DIP2CQ9Y2E4 1556 aa11.3□□□□□ -0.6
ZNF544-201ENST00000269829 NPATQ14207 1427 aa11.29□□□□□ -0.6
ZNF544-201ENST00000269829 ZC3H13Q5T200 1668 aaKnown RBP11.29□□□□□ -0.6
ZNF544-201ENST00000269829 PANK3Q9H999 370 aa11.29□□□□□ -0.6
ZNF544-201ENST00000269829 ABCA6Q8N139 1617 aa11.28□□□□□ -0.6
ZNF544-201ENST00000269829 PRDM15P57071 1507 aaPredicted RBP11.28□□□□□ -0.6
ZNF544-201ENST00000269829 DISP3Q9P2K9 1392 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms