RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 PRDM10Q9NQV6 1147 aa22.2■■□□□ 1.14
ITGA6-201ENST00000264107 KIF27Q86VH2 1401 aa22.2■■□□□ 1.14
ITGA6-201ENST00000264107 BECN2A8MW95 431 aa22.19■■□□□ 1.14
ITGA6-201ENST00000264107 BCL11BQ9C0K0 894 aaPredicted RBP22.18■■□□□ 1.14
ITGA6-201ENST00000264107 HSP90B1P14625 803 aaKnown RBP22.17■■□□□ 1.14
ITGA6-201ENST00000264107 CECR2Q9BXF3 1484 aa22.17■■□□□ 1.14
ITGA6-201ENST00000264107 HOMER1Q86YM7 354 aa22.17■■□□□ 1.14
ITGA6-201ENST00000264107 MCTP1Q6DN14 999 aa22.17■■□□□ 1.14
ITGA6-201ENST00000264107 NLRP13Q86W25 1043 aa22.15■■□□□ 1.14
ITGA6-201ENST00000264107 BAZ1AQ9NRL2 1556 aaPredicted RBP22.15■■□□□ 1.14
ITGA6-201ENST00000264107 PRKRIP1Q9H875 184 aaPredicted RBP22.15■■□□□ 1.14
ITGA6-201ENST00000264107 RDXP35241 583 aaKnown RBP22.15■■□□□ 1.14
ITGA6-201ENST00000264107 ATP6V1DQ9Y5K8 247 aa22.15■■□□□ 1.14
ITGA6-201ENST00000264107 DCAF11Q8TEB1 546 aa22.14■■□□□ 1.14
ITGA6-201ENST00000264107 GRPEL1Q9HAV7 217 aa22.14■■□□□ 1.13
ITGA6-201ENST00000264107 MNS1Q8NEH6 495 aa22.14■■□□□ 1.13
ITGA6-201ENST00000264107 SMC4Q9NTJ3 1288 aa22.14■■□□□ 1.13
ITGA6-201ENST00000264107 AEBP1Q8IUX7 1158 aa22.13■■□□□ 1.13
ITGA6-201ENST00000264107 ZHX1Q9UKY1 873 aaPredicted RBP22.12■■□□□ 1.13
ITGA6-201ENST00000264107 RNF214Q8ND24 703 aa22.11■■□□□ 1.13
ITGA6-201ENST00000264107 H0YHG0 523 aa22.11■■□□□ 1.13
ITGA6-201ENST00000264107 HSP90B2PQ58FF3 399 aa22.11■■□□□ 1.13
ITGA6-201ENST00000264107 MORC1Q86VD1 984 aa22.11■■□□□ 1.13
ITGA6-201ENST00000264107 BBXQ8WY36 941 aaPredicted RBP22.11■■□□□ 1.13
ITGA6-201ENST00000264107 NUCB2P80303 420 aa22.1■■□□□ 1.13
ITGA6-201ENST00000264107 TRIM6-TRIM34B2RNG4 842 aa22.1■■□□□ 1.13
ITGA6-201ENST00000264107 ISY1Q9ULR0 285 aaKnown RBP22.1■■□□□ 1.13
ITGA6-201ENST00000264107 PLEKHD1A6NEE1 506 aa22.09■■□□□ 1.13
ITGA6-201ENST00000264107 CCDC70Q6NSX1 233 aa22.09■■□□□ 1.13
ITGA6-201ENST00000264107 ACBD3Q9H3P7 528 aa22.09■■□□□ 1.13
ITGA6-201ENST00000264107 DHX57Q6P158 1386 aaKnown RBP22.08■■□□□ 1.13
ITGA6-201ENST00000264107 PHLDB1Q86UU1 1377 aa22.07■■□□□ 1.12
ITGA6-201ENST00000264107 CGNL1Q0VF96 1302 aa22.07■■□□□ 1.12
ITGA6-201ENST00000264107 SENP3Q9H4L4 574 aaPredicted RBP22.07■■□□□ 1.12
ITGA6-201ENST00000264107 LEKR1Q6ZMV7 388 aa22.07■■□□□ 1.12
ITGA6-201ENST00000264107 TAF7LQ5H9L4 462 aa22.06■■□□□ 1.12
ITGA6-201ENST00000264107 C22orf23Q9BZE7 217 aa22.06■■□□□ 1.12
ITGA6-201ENST00000264107 HAP1P54257 671 aaPredicted RBP22.06■■□□□ 1.12
ITGA6-201ENST00000264107 CCDC146Q8IYE0 955 aa22.05■■□□□ 1.12
ITGA6-201ENST00000264107 CCDC34Q96HJ3 373 aa22.05■■□□□ 1.12
ITGA6-201ENST00000264107 CAVIN1Q6NZI2 390 aaKnown RBP22.05■■□□□ 1.12
ITGA6-201ENST00000264107 VPS8Q8N3P4 1428 aa22.05■■□□□ 1.12
ITGA6-201ENST00000264107 BACH2Q9BYV9 841 aa22.05■■□□□ 1.12
ITGA6-201ENST00000264107 TPD52L1Q16890 204 aaPredicted RBP22.04■■□□□ 1.12
ITGA6-201ENST00000264107 ERICH4A6NGS2 130 aa22.04■■□□□ 1.12
ITGA6-201ENST00000264107 CBX1P83916 185 aa22.03■■□□□ 1.12
ITGA6-201ENST00000264107 CREBRFQ8IUR6 639 aa22.03■■□□□ 1.12
ITGA6-201ENST00000264107 CGNQ9P2M7 1197 aaKnown RBP22.03■■□□□ 1.12
ITGA6-201ENST00000264107 MYBBP1AQ9BQG0 1328 aaKnown RBP22.03■■□□□ 1.12
ITGA6-201ENST00000264107 PLPPR3Q6T4P5 718 aa22.03■■□□□ 1.12
ITGA6-201ENST00000264107 COG6Q9Y2V7 657 aa22.03■■□□□ 1.12
ITGA6-201ENST00000264107 HSP90AB3PQ58FF7 597 aa22.02■■□□□ 1.12
ITGA6-201ENST00000264107 DEF6Q9H4E7 631 aa22.02■■□□□ 1.12
ITGA6-201ENST00000264107 SF3A1Q15459 793 aaKnown RBP22.02■■□□□ 1.11
ITGA6-201ENST00000264107 TSPYL1Q9H0U9 437 aa22.01■■□□□ 1.11
ITGA6-201ENST00000264107 ZSCAN30Q86W11 494 aa22■■□□□ 1.11
ITGA6-201ENST00000264107 AK7Q96M32 723 aa22■■□□□ 1.11
ITGA6-201ENST00000264107 ANKRD45Q5TZF3 282 aa22■■□□□ 1.11
ITGA6-201ENST00000264107 KANK4Q5T7N3 995 aaPredicted RBP22■■□□□ 1.11
ITGA6-201ENST00000264107 PDCL2Q8N4E4 241 aa21.99■■□□□ 1.11
ITGA6-201ENST00000264107 CFDP1Q9UEE9 299 aaPredicted RBP21.99■■□□□ 1.11
ITGA6-201ENST00000264107 CHMP3Q9Y3E7 222 aa21.99■■□□□ 1.11
ITGA6-201ENST00000264107 U2AF1L5P0DN76 240 aaPredicted RBP21.98■■□□□ 1.11
ITGA6-201ENST00000264107 U2AF1Q01081 240 aaKnown RBP eCLIP21.98■■□□□ 1.11
ITGA6-201ENST00000264107 KIF15Q9NS87 1388 aa21.98■■□□□ 1.11
ITGA6-201ENST00000264107 FOXD1Q16676 465 aa21.98■■□□□ 1.11
ITGA6-201ENST00000264107 KIF3AQ9Y496 699 aa21.98■■□□□ 1.11
ITGA6-201ENST00000264107 HMMRO75330 724 aa21.98■■□□□ 1.11
ITGA6-201ENST00000264107 ROCK2O75116 1388 aaKnown RBP21.97■■□□□ 1.11
ITGA6-201ENST00000264107 SOGA1O94964 1423 aa21.96■■□□□ 1.11
ITGA6-201ENST00000264107 POGKQ9P215 609 aa21.96■■□□□ 1.11
ITGA6-201ENST00000264107 RUFY1Q96T51 708 aa21.95■■□□□ 1.1
ITGA6-201ENST00000264107 TSPY26PQ9H489 355 aa21.95■■□□□ 1.1
ITGA6-201ENST00000264107 NPHP1O15259 732 aa21.95■■□□□ 1.1
ITGA6-201ENST00000264107 H3BQV1 296 aa21.95■■□□□ 1.1
ITGA6-201ENST00000264107 IFFO2Q5TF58 517 aa21.95■■□□□ 1.1
ITGA6-201ENST00000264107 TPM1P09493 284 aa21.94■■□□□ 1.1
ITGA6-201ENST00000264107 TSR1Q2NL82 804 aaKnown RBP21.94■■□□□ 1.1
ITGA6-201ENST00000264107 CCDC191Q8NCU4 936 aa21.94■■□□□ 1.1
ITGA6-201ENST00000264107 RRP12Q5JTH9 1297 aaKnown RBP21.93■■□□□ 1.1
ITGA6-201ENST00000264107 SASS6Q6UVJ0 657 aa21.93■■□□□ 1.1
ITGA6-201ENST00000264107 BCL2L13Q9BXK5 485 aa21.92■■□□□ 1.1
ITGA6-201ENST00000264107 C14orf37Q86TY3 774 aa21.92■■□□□ 1.1
ITGA6-201ENST00000264107 L3MBTL2Q969R5 705 aa21.92■■□□□ 1.1
ITGA6-201ENST00000264107 CCDC112Q8NEF3 446 aa21.92■■□□□ 1.1
ITGA6-201ENST00000264107 MBD3O95983 291 aa21.91■■□□□ 1.1
ITGA6-201ENST00000264107 MCM4P33991 863 aa21.9■■□□□ 1.1
ITGA6-201ENST00000264107 REC8O95072 547 aa21.9■■□□□ 1.1
ITGA6-201ENST00000264107 USP8P40818 1118 aa21.9■■□□□ 1.1
ITGA6-201ENST00000264107 CALCOCO1Q9P1Z2 691 aa21.9■■□□□ 1.1
ITGA6-201ENST00000264107 BICD2Q8TD16 824 aa21.9■■□□□ 1.1
ITGA6-201ENST00000264107 GORABQ5T7V8 394 aa21.89■■□□□ 1.1
ITGA6-201ENST00000264107 E9PSI1 815 aa21.89■■□□□ 1.1
ITGA6-201ENST00000264107 PES1O00541 588 aaKnown RBP21.89■■□□□ 1.09
ITGA6-201ENST00000264107 ERCC4Q92889 916 aaPredicted RBP21.89■■□□□ 1.09
ITGA6-201ENST00000264107 PRPF40AO75400 957 aaKnown RBP21.88■■□□□ 1.09
ITGA6-201ENST00000264107 ZKSCAN2Q63HK3 967 aa21.88■■□□□ 1.09
ITGA6-201ENST00000264107 MPNDQ8N594 471 aa21.87■■□□□ 1.09
ITGA6-201ENST00000264107 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
ITGA6-201ENST00000264107 MPHOSPH9Q99550 1183 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms