RNA–Protein interactions for RNA: ENST00000258104.7

DYSF-201, Transcript of dysferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DYSF, Length 6,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-201ENST00000258104 DCAF8Q5TAQ9 597 aa18.64■□□□□ 0.57
DYSF-201ENST00000258104 SETD5Q9C0A6 1442 aa18.63■□□□□ 0.57
DYSF-201ENST00000258104 PLIN1O60240 522 aa18.63■□□□□ 0.57
DYSF-201ENST00000258104 ZNF771Q7L3S4 317 aaPredicted RBP18.63■□□□□ 0.57
DYSF-201ENST00000258104 ST18O60284 1047 aa18.63■□□□□ 0.57
DYSF-201ENST00000258104 BAZ1BQ9UIG0 1483 aaKnown RBP18.62■□□□□ 0.57
DYSF-201ENST00000258104 BCL2L13Q9BXK5 485 aa18.62■□□□□ 0.57
DYSF-201ENST00000258104 TMX4Q9H1E5 349 aaPredicted RBP18.61■□□□□ 0.57
DYSF-201ENST00000258104 CCDC34Q96HJ3 373 aa18.61■□□□□ 0.57
DYSF-201ENST00000258104 CENPJQ9HC77 1338 aaPredicted RBP18.61■□□□□ 0.57
DYSF-201ENST00000258104 FRAT2O75474 233 aaPredicted RBP18.6■□□□□ 0.57
DYSF-201ENST00000258104 HDGFP51858 240 aaKnown RBP18.6■□□□□ 0.57
DYSF-201ENST00000258104 RALBP1Q15311 655 aa18.6■□□□□ 0.57
DYSF-201ENST00000258104 DDX49Q9Y6V7 483 aaKnown RBP18.6■□□□□ 0.57
DYSF-201ENST00000258104 HMMRO75330 724 aa18.6■□□□□ 0.57
DYSF-201ENST00000258104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.6■□□□□ 0.57
DYSF-201ENST00000258104 NUTM2FA1L443 756 aa18.6■□□□□ 0.57
DYSF-201ENST00000258104 FBXW7Q969H0 707 aa18.58■□□□□ 0.57
DYSF-201ENST00000258104 DDX11L8A8MPP1 907 aa18.58■□□□□ 0.56
DYSF-201ENST00000258104 GOLGA6L19H0YKK7 550 aa18.58■□□□□ 0.56
DYSF-201ENST00000258104 ANKRD45Q5TZF3 282 aa18.57■□□□□ 0.56
DYSF-201ENST00000258104 MCTP1Q6DN14 999 aa18.57■□□□□ 0.56
DYSF-201ENST00000258104 ELL2O00472 640 aaPredicted RBP18.57■□□□□ 0.56
DYSF-201ENST00000258104 FAM184AQ8NB25 1140 aa18.57■□□□□ 0.56
DYSF-201ENST00000258104 ARHGAP35Q9NRY4 1499 aa18.55■□□□□ 0.56
DYSF-201ENST00000258104 RSPH6AQ9H0K4 717 aa18.54■□□□□ 0.56
DYSF-201ENST00000258104 TSR1Q2NL82 804 aaKnown RBP18.54■□□□□ 0.56
DYSF-201ENST00000258104 RAD21O60216 631 aa18.54■□□□□ 0.56
DYSF-201ENST00000258104 GSE1Q14687 1217 aa18.54■□□□□ 0.56
DYSF-201ENST00000258104 BECN2A8MW95 431 aa18.53■□□□□ 0.56
DYSF-201ENST00000258104 MPHOSPH9Q99550 1183 aa18.53■□□□□ 0.56
DYSF-201ENST00000258104 PCMTD1Q96MG8 357 aaPredicted RBP18.53■□□□□ 0.56
DYSF-201ENST00000258104 FOSBP53539 338 aa18.52■□□□□ 0.56
DYSF-201ENST00000258104 ERCC6Q03468 1493 aa18.52■□□□□ 0.56
DYSF-201ENST00000258104 FAM13BQ9NYF5 915 aa18.52■□□□□ 0.56
DYSF-201ENST00000258104 KANK4Q5T7N3 995 aaPredicted RBP18.52■□□□□ 0.56
DYSF-201ENST00000258104 NGEFQ8N5V2 710 aa18.51■□□□□ 0.55
DYSF-201ENST00000258104 PDE4AP27815 886 aa18.51■□□□□ 0.55
DYSF-201ENST00000258104 CRBNQ96SW2 442 aa18.5■□□□□ 0.55
DYSF-201ENST00000258104 AMPHP49418 695 aa18.5■□□□□ 0.55
DYSF-201ENST00000258104 USP35Q9P2H5 1018 aa18.5■□□□□ 0.55
DYSF-201ENST00000258104 RAB3GAP2Q9H2M9 1393 aa18.49■□□□□ 0.55
DYSF-201ENST00000258104 EXOC6Q8TAG9 804 aa18.49■□□□□ 0.55
DYSF-201ENST00000258104 FHAD1B1AJZ9 1412 aa18.48■□□□□ 0.55
DYSF-201ENST00000258104 NECTIN2Q92692 538 aa18.47■□□□□ 0.55
DYSF-201ENST00000258104 GTF2E1P29083 439 aaPredicted RBP18.47■□□□□ 0.55
DYSF-201ENST00000258104 NUP155O75694 1391 aa18.47■□□□□ 0.55
DYSF-201ENST00000258104 FAM161AQ3B820 660 aa18.47■□□□□ 0.55
DYSF-201ENST00000258104 TPM2P07951 284 aa18.46■□□□□ 0.55
DYSF-201ENST00000258104 AKAP17AQ02040 695 aaKnown RBP18.46■□□□□ 0.55
DYSF-201ENST00000258104 NGDNQ8NEJ9 315 aaKnown RBP18.46■□□□□ 0.55
DYSF-201ENST00000258104 TPM1P09493 284 aa18.45■□□□□ 0.54
DYSF-201ENST00000258104 KIF3AQ9Y496 699 aa18.44■□□□□ 0.54
DYSF-201ENST00000258104 HOMER1Q86YM7 354 aa18.44■□□□□ 0.54
DYSF-201ENST00000258104 CCDC70Q6NSX1 233 aa18.44■□□□□ 0.54
DYSF-201ENST00000258104 ANO2Q9NQ90 1003 aa18.44■□□□□ 0.54
DYSF-201ENST00000258104 SOGA1O94964 1423 aa18.44■□□□□ 0.54
DYSF-201ENST00000258104 GPS2Q13227 327 aa18.44■□□□□ 0.54
DYSF-201ENST00000258104 COG6Q9Y2V7 657 aa18.43■□□□□ 0.54
DYSF-201ENST00000258104 EIF3AQ14152 1382 aaKnown RBP18.43■□□□□ 0.54
DYSF-201ENST00000258104 CENPQQ7L2Z9 268 aaPredicted RBP18.43■□□□□ 0.54
DYSF-201ENST00000258104 TERF2IPQ9NYB0 399 aa18.42■□□□□ 0.54
DYSF-201ENST00000258104 TRAK1Q9UPV9 953 aa18.41■□□□□ 0.54
DYSF-201ENST00000258104 SKOR2Q2VWA4 1001 aaPredicted RBP18.4■□□□□ 0.54
DYSF-201ENST00000258104 EIF2S2P20042 333 aaKnown RBP18.4■□□□□ 0.54
DYSF-201ENST00000258104 KDM4AO75164 1064 aa18.39■□□□□ 0.54
DYSF-201ENST00000258104 DIAPH3Q9NSV4 1193 aa18.39■□□□□ 0.54
DYSF-201ENST00000258104 CARMIL1Q5VZK9 1371 aa18.39■□□□□ 0.53
DYSF-201ENST00000258104 BICD2Q8TD16 824 aa18.39■□□□□ 0.53
DYSF-201ENST00000258104 L3MBTL2Q969R5 705 aa18.39■□□□□ 0.53
DYSF-201ENST00000258104 CUX2O14529 1486 aa18.39■□□□□ 0.53
DYSF-201ENST00000258104 APPP05067 770 aa18.38■□□□□ 0.53
DYSF-201ENST00000258104 TCEAL9Q9UHQ7 104 aa18.38■□□□□ 0.53
DYSF-201ENST00000258104 LMOD3Q0VAK6 560 aa18.38■□□□□ 0.53
DYSF-201ENST00000258104 SYNE3Q6ZMZ3 975 aa18.38■□□□□ 0.53
DYSF-201ENST00000258104 NLRP13Q86W25 1043 aa18.38■□□□□ 0.53
DYSF-201ENST00000258104 HNRNPMP52272 730 aaKnown RBP eCLIP18.38■□□□□ 0.53
DYSF-201ENST00000258104 RRP1P56182 461 aaKnown RBP18.38■□□□□ 0.53
DYSF-201ENST00000258104 PANK3Q9H999 370 aa18.38■□□□□ 0.53
DYSF-201ENST00000258104 HDAC5Q9UQL6 1122 aa18.38■□□□□ 0.53
DYSF-201ENST00000258104 NAP1L1P55209 391 aaKnown RBP18.37■□□□□ 0.53
DYSF-201ENST00000258104 TRIM29Q14134 588 aa18.37■□□□□ 0.53
DYSF-201ENST00000258104 TEX35Q5T0J7 233 aa18.36■□□□□ 0.53
DYSF-201ENST00000258104 ATP6V1DQ9Y5K8 247 aa18.36■□□□□ 0.53
DYSF-201ENST00000258104 CALRP27797 417 aaKnown RBP18.36■□□□□ 0.53
DYSF-201ENST00000258104 KIF3BO15066 747 aa18.35■□□□□ 0.53
DYSF-201ENST00000258104 SAMD1Q6SPF0 538 aaPredicted RBP18.35■□□□□ 0.53
DYSF-201ENST00000258104 DHX16O60231 1041 aaKnown RBP18.34■□□□□ 0.53
DYSF-201ENST00000258104 VPS37CA5D8V6 355 aaPredicted RBP18.34■□□□□ 0.53
DYSF-201ENST00000258104 SKIDA1Q1XH10 827 aa18.34■□□□□ 0.53
DYSF-201ENST00000258104 IFT57Q9NWB7 429 aa18.34■□□□□ 0.53
DYSF-201ENST00000258104 KIF15Q9NS87 1388 aa18.34■□□□□ 0.53
DYSF-201ENST00000258104 ZKSCAN2Q63HK3 967 aa18.33■□□□□ 0.53
DYSF-201ENST00000258104 MSH5O43196 834 aa18.33■□□□□ 0.52
DYSF-201ENST00000258104 PDE3BQ13370 1112 aa18.33■□□□□ 0.52
DYSF-201ENST00000258104 MYBBP1AQ9BQG0 1328 aaKnown RBP18.33■□□□□ 0.52
DYSF-201ENST00000258104 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
DYSF-201ENST00000258104 RRP12Q5JTH9 1297 aaKnown RBP18.32■□□□□ 0.52
DYSF-201ENST00000258104 TTLL5Q6EMB2 1281 aa18.32■□□□□ 0.52
DYSF-201ENST00000258104 NFXL1Q6ZNB6 911 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms