RNA–Protein interactions for RNA: ENST00000257075.9

PUM1-201, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PUM1, Length 5,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-201ENST00000257075 ANP32EQ9BTT0 268 aa13.45□□□□□ -0.26
PUM1-201ENST00000257075 SLC4A10Q6U841 1118 aa13.45□□□□□ -0.26
PUM1-201ENST00000257075 GPATCH3Q96I76 525 aa13.45□□□□□ -0.26
PUM1-201ENST00000257075 IGF1RP08069 1367 aa13.44□□□□□ -0.26
PUM1-201ENST00000257075 RAPGEF4Q8WZA2 1011 aa13.43□□□□□ -0.26
PUM1-201ENST00000257075 GOLGA6L4A6NEF3 574 aa13.43□□□□□ -0.26
PUM1-201ENST00000257075 CGNL1Q0VF96 1302 aa13.43□□□□□ -0.26
PUM1-201ENST00000257075 POGZQ7Z3K3 1410 aa13.43□□□□□ -0.26
PUM1-201ENST00000257075 ITPRIPQ8IWB1 547 aa13.43□□□□□ -0.26
PUM1-201ENST00000257075 HMMRO75330 724 aa13.42□□□□□ -0.26
PUM1-201ENST00000257075 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
PUM1-201ENST00000257075 AFAP1Q8N556 730 aa13.41□□□□□ -0.26
PUM1-201ENST00000257075 HSP90AB1P08238 724 aaKnown RBP13.41□□□□□ -0.26
PUM1-201ENST00000257075 DHX57Q6P158 1386 aaKnown RBP13.41□□□□□ -0.26
PUM1-201ENST00000257075 NLRP2Q9NX02 1062 aa13.4□□□□□ -0.26
PUM1-201ENST00000257075 SMC4Q9NTJ3 1288 aa13.4□□□□□ -0.26
PUM1-201ENST00000257075 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.4□□□□□ -0.26
PUM1-201ENST00000257075 GPRASP1Q5JY77 1395 aa13.4□□□□□ -0.27
PUM1-201ENST00000257075 NCBP3Q53F19 620 aaKnown RBP13.4□□□□□ -0.27
PUM1-201ENST00000257075 ANKLE2Q86XL3 938 aa13.4□□□□□ -0.27
PUM1-201ENST00000257075 PIP4K2BP78356 416 aa13.39□□□□□ -0.27
PUM1-201ENST00000257075 MYOM3Q5VTT5 1437 aa13.39□□□□□ -0.27
PUM1-201ENST00000257075 SYNJ2O15056 1496 aa13.39□□□□□ -0.27
PUM1-201ENST00000257075 NEXNQ0ZGT2 675 aa13.39□□□□□ -0.27
PUM1-201ENST00000257075 NUTM2BA6NNL0 878 aaPredicted RBP13.38□□□□□ -0.27
PUM1-201ENST00000257075 NUTM2EB1AL46 878 aaPredicted RBP13.38□□□□□ -0.27
PUM1-201ENST00000257075 ESCO1Q5FWF5 840 aa13.38□□□□□ -0.27
PUM1-201ENST00000257075 NUTM2AQ8IVF1 878 aaPredicted RBP13.38□□□□□ -0.27
PUM1-201ENST00000257075 NGEFQ8N5V2 710 aa13.38□□□□□ -0.27
PUM1-201ENST00000257075 KIF15Q9NS87 1388 aa13.37□□□□□ -0.27
PUM1-201ENST00000257075 STAC3Q96MF2 364 aa13.37□□□□□ -0.27
PUM1-201ENST00000257075 WASHC2AQ641Q2 1341 aa13.37□□□□□ -0.27
PUM1-201ENST00000257075 ST20-MTHFSA0A0A6YYL1 179 aa13.36□□□□□ -0.27
PUM1-201ENST00000257075 NBR1Q14596 966 aa13.36□□□□□ -0.27
PUM1-201ENST00000257075 NOL10Q9BSC4 688 aaKnown RBP13.36□□□□□ -0.27
PUM1-201ENST00000257075 TOMM22Q9NS69 142 aa13.36□□□□□ -0.27
PUM1-201ENST00000257075 PTMAP06454 111 aaKnown RBP13.36□□□□□ -0.27
PUM1-201ENST00000257075 USP35Q9P2H5 1018 aa13.36□□□□□ -0.27
PUM1-201ENST00000257075 NLRP6P59044 892 aa13.35□□□□□ -0.27
PUM1-201ENST00000257075 TRIM34Q9BYJ4 488 aa13.35□□□□□ -0.27
PUM1-201ENST00000257075 NESP48681 1621 aa13.35□□□□□ -0.27
PUM1-201ENST00000257075 CC2D2AQ9P2K1 1620 aa13.35□□□□□ -0.27
PUM1-201ENST00000257075 NLRP13Q86W25 1043 aa13.35□□□□□ -0.27
PUM1-201ENST00000257075 RWDD1Q9H446 243 aaPredicted RBP13.35□□□□□ -0.27
PUM1-201ENST00000257075 CCDC146Q8IYE0 955 aa13.35□□□□□ -0.27
PUM1-201ENST00000257075 ARHGAP5Q13017 1502 aa13.34□□□□□ -0.27
PUM1-201ENST00000257075 PANK3Q9H999 370 aa13.34□□□□□ -0.27
PUM1-201ENST00000257075 PPP4R2Q9NY27 417 aa13.34□□□□□ -0.27
PUM1-201ENST00000257075 GOLGA6L6A8MZA4 724 aa13.33□□□□□ -0.28
PUM1-201ENST00000257075 NUTM2GQ5VZR2 741 aa13.33□□□□□ -0.28
PUM1-201ENST00000257075 CENPJQ9HC77 1338 aaPredicted RBP13.33□□□□□ -0.28
PUM1-201ENST00000257075 EIF2S2P20042 333 aaKnown RBP13.33□□□□□ -0.28
PUM1-201ENST00000257075 CCER2I3L3R5 266 aa13.32□□□□□ -0.28
PUM1-201ENST00000257075 CTDP1Q9Y5B0 961 aaPredicted RBP13.32□□□□□ -0.28
PUM1-201ENST00000257075 TRIM44Q96DX7 344 aaPredicted RBP13.32□□□□□ -0.28
PUM1-201ENST00000257075 NRDCO43847 1150 aa13.32□□□□□ -0.28
PUM1-201ENST00000257075 PLCB2Q00722 1185 aa13.32□□□□□ -0.28
PUM1-201ENST00000257075 TRIM6-TRIM34B2RNG4 842 aa13.32□□□□□ -0.28
PUM1-201ENST00000257075 FBXW7Q969H0 707 aa13.32□□□□□ -0.28
PUM1-201ENST00000257075 STRN4Q9NRL3 753 aa13.32□□□□□ -0.28
PUM1-201ENST00000257075 ZNF644Q9H582 1327 aaPredicted RBP13.32□□□□□ -0.28
PUM1-201ENST00000257075 RAPGEF3O95398 923 aa13.31□□□□□ -0.28
PUM1-201ENST00000257075 PRDM2Q13029 1718 aa13.31□□□□□ -0.28
PUM1-201ENST00000257075 DDX58O95786 925 aaKnown RBP13.31□□□□□ -0.28
PUM1-201ENST00000257075 B4GALNT3Q6L9W6 998 aa13.31□□□□□ -0.28
PUM1-201ENST00000257075 VPS37DQ86XT2 251 aa13.31□□□□□ -0.28
PUM1-201ENST00000257075 HSCBQ8IWL3 235 aa13.31□□□□□ -0.28
PUM1-201ENST00000257075 AMOTL1Q8IY63 956 aa13.31□□□□□ -0.28
PUM1-201ENST00000257075 PPP1R1BQ9UD71 204 aaPredicted RBP13.31□□□□□ -0.28
PUM1-201ENST00000257075 DNAJC5BQ9UF47 199 aa13.31□□□□□ -0.28
PUM1-201ENST00000257075 DIAPH1O60610 1272 aaKnown RBP13.31□□□□□ -0.28
PUM1-201ENST00000257075 ABTB2Q8N961 1025 aa13.31□□□□□ -0.28
PUM1-201ENST00000257075 RBM33Q96EV2 1170 aaKnown RBP13.3□□□□□ -0.28
PUM1-201ENST00000257075 ELL2O00472 640 aaPredicted RBP13.3□□□□□ -0.28
PUM1-201ENST00000257075 CWC22Q9HCG8 908 aaKnown RBP13.29□□□□□ -0.28
PUM1-201ENST00000257075 VPS53Q5VIR6 699 aa13.29□□□□□ -0.28
PUM1-201ENST00000257075 PHLDB1Q86UU1 1377 aa13.29□□□□□ -0.28
PUM1-201ENST00000257075 C9orf78Q9NZ63 289 aaPredicted RBP13.29□□□□□ -0.28
PUM1-201ENST00000257075 RRP7AQ9Y3A4 280 aaKnown RBP13.28□□□□□ -0.28
PUM1-201ENST00000257075 MIA2Q96PC5 1412 aa13.28□□□□□ -0.28
PUM1-201ENST00000257075 MARCH6O60337 910 aa13.28□□□□□ -0.28
PUM1-201ENST00000257075 RCAN3Q9UKA8 241 aa13.27□□□□□ -0.28
PUM1-201ENST00000257075 CLUAP1Q96AJ1 413 aa13.27□□□□□ -0.28
PUM1-201ENST00000257075 SCAPERQ9BY12 1400 aa13.27□□□□□ -0.29
PUM1-201ENST00000257075 RUSC2Q8N2Y8 1516 aa13.27□□□□□ -0.29
PUM1-201ENST00000257075 LRRFIP1Q32MZ4 808 aaKnown RBP13.27□□□□□ -0.29
PUM1-201ENST00000257075 SLC52A1Q9NWF4 448 aa13.27□□□□□ -0.29
PUM1-201ENST00000257075 CFTRP13569 1480 aa13.27□□□□□ -0.29
PUM1-201ENST00000257075 HSP90B1P14625 803 aaKnown RBP13.26□□□□□ -0.29
PUM1-201ENST00000257075 TMEM132EQ6IEE7 984 aa13.26□□□□□ -0.29
PUM1-201ENST00000257075 DMRT2Q9Y5R5 561 aa13.26□□□□□ -0.29
PUM1-201ENST00000257075 SNAPC4Q5SXM2 1469 aa13.26□□□□□ -0.29
PUM1-201ENST00000257075 PMFBP1Q8TBY8 1022 aa13.26□□□□□ -0.29
PUM1-201ENST00000257075 CCDC34Q96HJ3 373 aa13.26□□□□□ -0.29
PUM1-201ENST00000257075 RASSF8Q8NHQ8 419 aa13.25□□□□□ -0.29
PUM1-201ENST00000257075 ANKRD50Q9ULJ7 1429 aa13.25□□□□□ -0.29
PUM1-201ENST00000257075 RAD21O60216 631 aa13.25□□□□□ -0.29
PUM1-201ENST00000257075 HTATSF1O43719 755 aaKnown RBP13.24□□□□□ -0.29
PUM1-201ENST00000257075 HMGB2P26583 209 aaKnown RBP13.24□□□□□ -0.29
PUM1-201ENST00000257075 PDE3BQ13370 1112 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms