RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 FAM117AQ9C073 453 aa8.92□□□□□ -0.98
HMGB1P5-201ENST00000255320 DOK7Q18PE1 504 aa8.91□□□□□ -0.98
HMGB1P5-201ENST00000255320 PLEKHG3A1L390 1219 aa8.9□□□□□ -0.98
HMGB1P5-201ENST00000255320 NUDT7P0C024 238 aa8.9□□□□□ -0.98
HMGB1P5-201ENST00000255320 ERICH6Q7L0X2 663 aa8.9□□□□□ -0.98
HMGB1P5-201ENST00000255320 DAXXQ9UER7 740 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P5-201ENST00000255320 ARSIQ5FYB1 569 aa8.89□□□□□ -0.99
HMGB1P5-201ENST00000255320 GPR153Q6NV75 609 aa8.89□□□□□ -0.99
HMGB1P5-201ENST00000255320 ZSWIM6Q9HCJ5 1215 aa8.89□□□□□ -0.99
HMGB1P5-201ENST00000255320 TTLL12Q14166 644 aaPredicted RBP8.88□□□□□ -0.99
HMGB1P5-201ENST00000255320 ZNF454Q8N9F8 522 aa8.88□□□□□ -0.99
HMGB1P5-201ENST00000255320 C14orf37Q86TY3 774 aa8.87□□□□□ -0.99
HMGB1P5-201ENST00000255320 ZDHHC16Q969W1 377 aa8.87□□□□□ -0.99
HMGB1P5-201ENST00000255320 PHOX2BQ99453 314 aa8.87□□□□□ -0.99
HMGB1P5-201ENST00000255320 REPIN1Q9BWE0 567 aaKnown RBP8.87□□□□□ -0.99
HMGB1P5-201ENST00000255320 C6orf132Q5T0Z8 1188 aa8.86□□□□□ -0.99
HMGB1P5-201ENST00000255320 GIGYF2Q6Y7W6 1299 aaKnown RBP8.86□□□□□ -0.99
HMGB1P5-201ENST00000255320 DDRGK1Q96HY6 314 aa8.86□□□□□ -0.99
HMGB1P5-201ENST00000255320 TMUB1Q9BVT8 246 aa8.86□□□□□ -0.99
HMGB1P5-201ENST00000255320 ADAM33Q9BZ11 813 aa8.86□□□□□ -0.99
HMGB1P5-201ENST00000255320 SCUBE2Q9NQ36 999 aa8.86□□□□□ -0.99
HMGB1P5-201ENST00000255320 RIMBP2O15034 1052 aa8.85□□□□□ -0.99
HMGB1P5-201ENST00000255320 MS4A1P11836 297 aa8.85□□□□□ -0.99
HMGB1P5-201ENST00000255320 PADI6Q6TGC4 694 aa8.85□□□□□ -0.99
HMGB1P5-201ENST00000255320 CERKQ8TCT0 537 aa8.84□□□□□ -0.99
HMGB1P5-201ENST00000255320 FAM161AQ3B820 660 aa8.83□□□□□ -1
HMGB1P5-201ENST00000255320 MAMSTRQ6ZN01 415 aa8.83□□□□□ -1
HMGB1P5-201ENST00000255320 TTC13Q8NBP0 860 aa8.83□□□□□ -1
HMGB1P5-201ENST00000255320 RBM27Q9P2N5 1060 aaKnown RBP8.83□□□□□ -1
HMGB1P5-201ENST00000255320 METTL3Q86U44 580 aaKnown RBP8.82□□□□□ -1
HMGB1P5-201ENST00000255320 LHX6Q9UPM6 363 aa8.82□□□□□ -1
HMGB1P5-201ENST00000255320 ADGRG1Q9Y653 693 aa8.82□□□□□ -1
HMGB1P5-201ENST00000255320 MDM2Q00987 491 aaPredicted RBP8.81□□□□□ -1
HMGB1P5-201ENST00000255320 ZNF710Q8N1W2 664 aa8.81□□□□□ -1
HMGB1P5-201ENST00000255320 CLCN1P35523 988 aa8.8□□□□□ -1
HMGB1P5-201ENST00000255320 GPCPD1Q9NPB8 672 aa8.8□□□□□ -1
HMGB1P5-201ENST00000255320 PXYLP1Q8TE99 480 aa8.79□□□□□ -1
HMGB1P5-201ENST00000255320 COL9A1P20849 921 aa8.78□□□□□ -1
HMGB1P5-201ENST00000255320 PRSS12P56730 875 aa8.78□□□□□ -1
HMGB1P5-201ENST00000255320 PPP4R3BQ5MIZ7 849 aa8.78□□□□□ -1
HMGB1P5-201ENST00000255320 NLRP7Q8WX94 980 aa8.78□□□□□ -1
HMGB1P5-201ENST00000255320 BCL2L12Q9HB09 334 aa8.78□□□□□ -1
HMGB1P5-201ENST00000255320 OATP04181 439 aa8.77□□□□□ -1.01
HMGB1P5-201ENST00000255320 CDCA7LQ96GN5 454 aa8.77□□□□□ -1.01
HMGB1P5-201ENST00000255320 GOPCQ9HD26 462 aa8.77□□□□□ -1.01
HMGB1P5-201ENST00000255320 FAM198AQ9UFP1 575 aa8.77□□□□□ -1.01
HMGB1P5-201ENST00000255320 HOXB1P14653 301 aaPredicted RBP8.76□□□□□ -1.01
HMGB1P5-201ENST00000255320 FAM217BQ9NTX9 383 aaPredicted RBP8.76□□□□□ -1.01
HMGB1P5-201ENST00000255320 PSDA5PKW4 1024 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P5-201ENST00000255320 PPP1R3GB7ZBB8 358 aa8.74□□□□□ -1.01
HMGB1P5-201ENST00000255320 SNPHO15079 494 aa8.73□□□□□ -1.01
HMGB1P5-201ENST00000255320 SSTR3P32745 418 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P5-201ENST00000255320 TSKSQ9UJT2 592 aa8.73□□□□□ -1.01
HMGB1P5-201ENST00000255320 C3orf80F5H4A9 247 aa8.72□□□□□ -1.01
HMGB1P5-201ENST00000255320 SH3D19Q5HYK7 790 aa8.72□□□□□ -1.01
HMGB1P5-201ENST00000255320 OTUD5Q96G74 571 aa8.72□□□□□ -1.01
HMGB1P5-201ENST00000255320 PTPREP23469 700 aa8.71□□□□□ -1.02
HMGB1P5-201ENST00000255320 RBM46Q8TBY0 533 aaKnown RBP8.71□□□□□ -1.02
HMGB1P5-201ENST00000255320 BEGAINQ9BUH8 593 aa8.71□□□□□ -1.02
HMGB1P5-201ENST00000255320 EYA1Q99502 592 aa8.7□□□□□ -1.02
HMGB1P5-201ENST00000255320 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.68□□□□□ -1.02
HMGB1P5-201ENST00000255320 RCCD1A6NED2 376 aa8.68□□□□□ -1.02
HMGB1P5-201ENST00000255320 TRIM6-TRIM34B2RNG4 842 aa8.68□□□□□ -1.02
HMGB1P5-201ENST00000255320 ONECUT3O60422 494 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P5-201ENST00000255320 PCMTD1Q96MG8 357 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P5-201ENST00000255320 SKIV2LQ15477 1246 aaKnown RBP8.66□□□□□ -1.02
HMGB1P5-201ENST00000255320 PROX2Q3B8N5 592 aa8.66□□□□□ -1.02
HMGB1P5-201ENST00000255320 NUDT18Q6ZVK8 323 aa8.66□□□□□ -1.02
HMGB1P5-201ENST00000255320 KCNK17Q96T54 332 aa8.66□□□□□ -1.02
HMGB1P5-201ENST00000255320 NBPF26B4DH59 902 aa8.65□□□□□ -1.02
HMGB1P5-201ENST00000255320 MYSM1Q5VVJ2 828 aa8.65□□□□□ -1.02
HMGB1P5-201ENST00000255320 RSPH6AQ9H0K4 717 aa8.65□□□□□ -1.02
HMGB1P5-201ENST00000255320 TATDN2Q93075 761 aa8.64□□□□□ -1.03
HMGB1P5-201ENST00000255320 PNMA3Q9UL41 463 aa8.64□□□□□ -1.03
HMGB1P5-201ENST00000255320 CD46P15529 392 aa8.63□□□□□ -1.03
HMGB1P5-201ENST00000255320 DNAJB2P25686 324 aa8.63□□□□□ -1.03
HMGB1P5-201ENST00000255320 TMEM134Q9H6X4 195 aa8.63□□□□□ -1.03
HMGB1P5-201ENST00000255320 SUPT5HO00267 1087 aaKnown RBP8.62□□□□□ -1.03
HMGB1P5-201ENST00000255320 POTEEQ6S8J3 1075 aa8.62□□□□□ -1.03
HMGB1P5-201ENST00000255320 PROCA1Q8NCQ7 364 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P5-201ENST00000255320 ZBED2Q9BTP6 218 aa8.62□□□□□ -1.03
HMGB1P5-201ENST00000255320 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.62□□□□□ -1.03
HMGB1P5-201ENST00000255320 TBC1D2Q9BYX2 928 aa8.62□□□□□ -1.03
HMGB1P5-201ENST00000255320 ZMYND15Q9H091 742 aa8.62□□□□□ -1.03
HMGB1P5-201ENST00000255320 FLIIQ13045 1269 aa8.61□□□□□ -1.03
HMGB1P5-201ENST00000255320 PACS2Q86VP3 889 aa8.61□□□□□ -1.03
HMGB1P5-201ENST00000255320 SMAPO00193 183 aa8.6□□□□□ -1.03
HMGB1P5-201ENST00000255320 CLK2P49760 499 aaKnown RBP8.6□□□□□ -1.03
HMGB1P5-201ENST00000255320 PSEN2P49810 448 aa8.6□□□□□ -1.03
HMGB1P5-201ENST00000255320 POLR3EQ9NVU0 708 aa8.6□□□□□ -1.03
HMGB1P5-201ENST00000255320 MCM6Q14566 821 aa8.58□□□□□ -1.04
HMGB1P5-201ENST00000255320 VARS2Q5ST30 1063 aaKnown RBP8.58□□□□□ -1.04
HMGB1P5-201ENST00000255320 LHX8Q68G74 356 aa8.58□□□□□ -1.04
HMGB1P5-201ENST00000255320 SULF1Q8IWU6 871 aa8.58□□□□□ -1.04
HMGB1P5-201ENST00000255320 SPIRE2Q8WWL2 714 aa8.58□□□□□ -1.04
HMGB1P5-201ENST00000255320 KIAA1468Q9P260 1216 aa8.58□□□□□ -1.04
HMGB1P5-201ENST00000255320 LIMD1Q9UGP4 676 aa8.58□□□□□ -1.04
HMGB1P5-201ENST00000255320 DDX11L8A8MPP1 907 aa8.57□□□□□ -1.04
HMGB1P5-201ENST00000255320 DIXDC1Q155Q3 683 aa8.57□□□□□ -1.04
HMGB1P5-201ENST00000255320 FBXO31Q5XUX0 539 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms