RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 FAM117AQ9C073 453 aa8.92□□□□□ -0.98
HMGB1P5-201ENST00000255320 DOK7Q18PE1 504 aa8.91□□□□□ -0.98
HMGB1P5-201ENST00000255320 PLEKHG3A1L390 1219 aa8.9□□□□□ -0.98
HMGB1P5-201ENST00000255320 NUDT7P0C024 238 aa8.9□□□□□ -0.98
HMGB1P5-201ENST00000255320 ERICH6Q7L0X2 663 aa8.9□□□□□ -0.98
HMGB1P5-201ENST00000255320 DAXXQ9UER7 740 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P5-201ENST00000255320 ARSIQ5FYB1 569 aa8.89□□□□□ -0.99
HMGB1P5-201ENST00000255320 GPR153Q6NV75 609 aa8.89□□□□□ -0.99
HMGB1P5-201ENST00000255320 ZSWIM6Q9HCJ5 1215 aa8.89□□□□□ -0.99
HMGB1P5-201ENST00000255320 TTLL12Q14166 644 aaPredicted RBP8.88□□□□□ -0.99
HMGB1P5-201ENST00000255320 ZNF454Q8N9F8 522 aa8.88□□□□□ -0.99
HMGB1P5-201ENST00000255320 C14orf37Q86TY3 774 aa8.87□□□□□ -0.99
HMGB1P5-201ENST00000255320 ZDHHC16Q969W1 377 aa8.87□□□□□ -0.99
HMGB1P5-201ENST00000255320 PHOX2BQ99453 314 aa8.87□□□□□ -0.99
HMGB1P5-201ENST00000255320 REPIN1Q9BWE0 567 aaKnown RBP8.87□□□□□ -0.99
HMGB1P5-201ENST00000255320 C6orf132Q5T0Z8 1188 aa8.86□□□□□ -0.99
HMGB1P5-201ENST00000255320 GIGYF2Q6Y7W6 1299 aaKnown RBP8.86□□□□□ -0.99
HMGB1P5-201ENST00000255320 DDRGK1Q96HY6 314 aa8.86□□□□□ -0.99
HMGB1P5-201ENST00000255320 TMUB1Q9BVT8 246 aa8.86□□□□□ -0.99
HMGB1P5-201ENST00000255320 ADAM33Q9BZ11 813 aa8.86□□□□□ -0.99
HMGB1P5-201ENST00000255320 SCUBE2Q9NQ36 999 aa8.86□□□□□ -0.99
HMGB1P5-201ENST00000255320 RIMBP2O15034 1052 aa8.85□□□□□ -0.99
HMGB1P5-201ENST00000255320 MS4A1P11836 297 aa8.85□□□□□ -0.99
HMGB1P5-201ENST00000255320 PADI6Q6TGC4 694 aa8.85□□□□□ -0.99
HMGB1P5-201ENST00000255320 CERKQ8TCT0 537 aa8.84□□□□□ -0.99
HMGB1P5-201ENST00000255320 FAM161AQ3B820 660 aa8.83□□□□□ -1
HMGB1P5-201ENST00000255320 MAMSTRQ6ZN01 415 aa8.83□□□□□ -1
HMGB1P5-201ENST00000255320 TTC13Q8NBP0 860 aa8.83□□□□□ -1
HMGB1P5-201ENST00000255320 RBM27Q9P2N5 1060 aaKnown RBP8.83□□□□□ -1
HMGB1P5-201ENST00000255320 METTL3Q86U44 580 aaKnown RBP8.82□□□□□ -1
HMGB1P5-201ENST00000255320 LHX6Q9UPM6 363 aa8.82□□□□□ -1
HMGB1P5-201ENST00000255320 ADGRG1Q9Y653 693 aa8.82□□□□□ -1
HMGB1P5-201ENST00000255320 MDM2Q00987 491 aaPredicted RBP8.81□□□□□ -1
HMGB1P5-201ENST00000255320 ZNF710Q8N1W2 664 aa8.81□□□□□ -1
HMGB1P5-201ENST00000255320 CLCN1P35523 988 aa8.8□□□□□ -1
HMGB1P5-201ENST00000255320 GPCPD1Q9NPB8 672 aa8.8□□□□□ -1
HMGB1P5-201ENST00000255320 PXYLP1Q8TE99 480 aa8.79□□□□□ -1
HMGB1P5-201ENST00000255320 COL9A1P20849 921 aa8.78□□□□□ -1
HMGB1P5-201ENST00000255320 PRSS12P56730 875 aa8.78□□□□□ -1
HMGB1P5-201ENST00000255320 PPP4R3BQ5MIZ7 849 aa8.78□□□□□ -1
HMGB1P5-201ENST00000255320 NLRP7Q8WX94 980 aa8.78□□□□□ -1
HMGB1P5-201ENST00000255320 BCL2L12Q9HB09 334 aa8.78□□□□□ -1
HMGB1P5-201ENST00000255320 OATP04181 439 aa8.77□□□□□ -1.01
HMGB1P5-201ENST00000255320 CDCA7LQ96GN5 454 aa8.77□□□□□ -1.01
HMGB1P5-201ENST00000255320 GOPCQ9HD26 462 aa8.77□□□□□ -1.01
HMGB1P5-201ENST00000255320 FAM198AQ9UFP1 575 aa8.77□□□□□ -1.01
HMGB1P5-201ENST00000255320 HOXB1P14653 301 aaPredicted RBP8.76□□□□□ -1.01
HMGB1P5-201ENST00000255320 FAM217BQ9NTX9 383 aaPredicted RBP8.76□□□□□ -1.01
HMGB1P5-201ENST00000255320 PSDA5PKW4 1024 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P5-201ENST00000255320 PPP1R3GB7ZBB8 358 aa8.74□□□□□ -1.01
HMGB1P5-201ENST00000255320 SNPHO15079 494 aa8.73□□□□□ -1.01
HMGB1P5-201ENST00000255320 SSTR3P32745 418 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P5-201ENST00000255320 TSKSQ9UJT2 592 aa8.73□□□□□ -1.01
HMGB1P5-201ENST00000255320 C3orf80F5H4A9 247 aa8.72□□□□□ -1.01
HMGB1P5-201ENST00000255320 SH3D19Q5HYK7 790 aa8.72□□□□□ -1.01
HMGB1P5-201ENST00000255320 OTUD5Q96G74 571 aa8.72□□□□□ -1.01
HMGB1P5-201ENST00000255320 PTPREP23469 700 aa8.71□□□□□ -1.02
HMGB1P5-201ENST00000255320 RBM46Q8TBY0 533 aaKnown RBP8.71□□□□□ -1.02
HMGB1P5-201ENST00000255320 BEGAINQ9BUH8 593 aa8.71□□□□□ -1.02
HMGB1P5-201ENST00000255320 EYA1Q99502 592 aa8.7□□□□□ -1.02
HMGB1P5-201ENST00000255320 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.68□□□□□ -1.02
HMGB1P5-201ENST00000255320 RCCD1A6NED2 376 aa8.68□□□□□ -1.02
HMGB1P5-201ENST00000255320 TRIM6-TRIM34B2RNG4 842 aa8.68□□□□□ -1.02
HMGB1P5-201ENST00000255320 ONECUT3O60422 494 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P5-201ENST00000255320 PCMTD1Q96MG8 357 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P5-201ENST00000255320 SKIV2LQ15477 1246 aaKnown RBP8.66□□□□□ -1.02
HMGB1P5-201ENST00000255320 PROX2Q3B8N5 592 aa8.66□□□□□ -1.02
HMGB1P5-201ENST00000255320 NUDT18Q6ZVK8 323 aa8.66□□□□□ -1.02
HMGB1P5-201ENST00000255320 KCNK17Q96T54 332 aa8.66□□□□□ -1.02
HMGB1P5-201ENST00000255320 NBPF26B4DH59 902 aa8.65□□□□□ -1.02
HMGB1P5-201ENST00000255320 MYSM1Q5VVJ2 828 aa8.65□□□□□ -1.02
HMGB1P5-201ENST00000255320 RSPH6AQ9H0K4 717 aa8.65□□□□□ -1.02
HMGB1P5-201ENST00000255320 TATDN2Q93075 761 aa8.64□□□□□ -1.03
HMGB1P5-201ENST00000255320 PNMA3Q9UL41 463 aa8.64□□□□□ -1.03
HMGB1P5-201ENST00000255320 CD46P15529 392 aa8.63□□□□□ -1.03
HMGB1P5-201ENST00000255320 DNAJB2P25686 324 aa8.63□□□□□ -1.03
HMGB1P5-201ENST00000255320 TMEM134Q9H6X4 195 aa8.63□□□□□ -1.03
HMGB1P5-201ENST00000255320 SUPT5HO00267 1087 aaKnown RBP8.62□□□□□ -1.03
HMGB1P5-201ENST00000255320 POTEEQ6S8J3 1075 aa8.62□□□□□ -1.03
HMGB1P5-201ENST00000255320 PROCA1Q8NCQ7 364 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P5-201ENST00000255320 ZBED2Q9BTP6 218 aa8.62□□□□□ -1.03
HMGB1P5-201ENST00000255320 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.62□□□□□ -1.03
HMGB1P5-201ENST00000255320 TBC1D2Q9BYX2 928 aa8.62□□□□□ -1.03
HMGB1P5-201ENST00000255320 ZMYND15Q9H091 742 aa8.62□□□□□ -1.03
HMGB1P5-201ENST00000255320 FLIIQ13045 1269 aa8.61□□□□□ -1.03
HMGB1P5-201ENST00000255320 PACS2Q86VP3 889 aa8.61□□□□□ -1.03
HMGB1P5-201ENST00000255320 SMAPO00193 183 aa8.6□□□□□ -1.03
HMGB1P5-201ENST00000255320 CLK2P49760 499 aaKnown RBP8.6□□□□□ -1.03
HMGB1P5-201ENST00000255320 PSEN2P49810 448 aa8.6□□□□□ -1.03
HMGB1P5-201ENST00000255320 POLR3EQ9NVU0 708 aa8.6□□□□□ -1.03
HMGB1P5-201ENST00000255320 MCM6Q14566 821 aa8.58□□□□□ -1.04
HMGB1P5-201ENST00000255320 VARS2Q5ST30 1063 aaKnown RBP8.58□□□□□ -1.04
HMGB1P5-201ENST00000255320 LHX8Q68G74 356 aa8.58□□□□□ -1.04
HMGB1P5-201ENST00000255320 SULF1Q8IWU6 871 aa8.58□□□□□ -1.04
HMGB1P5-201ENST00000255320 SPIRE2Q8WWL2 714 aa8.58□□□□□ -1.04
HMGB1P5-201ENST00000255320 KIAA1468Q9P260 1216 aa8.58□□□□□ -1.04
HMGB1P5-201ENST00000255320 LIMD1Q9UGP4 676 aa8.58□□□□□ -1.04
HMGB1P5-201ENST00000255320 DDX11L8A8MPP1 907 aa8.57□□□□□ -1.04
HMGB1P5-201ENST00000255320 DIXDC1Q155Q3 683 aa8.57□□□□□ -1.04
HMGB1P5-201ENST00000255320 FBXO31Q5XUX0 539 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms