RNA–Protein interactions for RNA: ENST00000247829.7

TSPAN8-201, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-201ENST00000247829 ANKRD13DQ6ZTN6 518 aa11.32□□□□□ -0.6
TSPAN8-201ENST00000247829 RBM33Q96EV2 1170 aaKnown RBP11.32□□□□□ -0.6
TSPAN8-201ENST00000247829 OSBPP22059 807 aa11.3□□□□□ -0.6
TSPAN8-201ENST00000247829 PTPREP23469 700 aa11.3□□□□□ -0.6
TSPAN8-201ENST00000247829 LSM11P83369 360 aaKnown RBP eCLIP11.3□□□□□ -0.6
TSPAN8-201ENST00000247829 DMRTA1Q5VZB9 504 aa11.3□□□□□ -0.6
TSPAN8-201ENST00000247829 PRIM1P49642 420 aaKnown RBP11.29□□□□□ -0.6
TSPAN8-201ENST00000247829 C6orf132Q5T0Z8 1188 aa11.29□□□□□ -0.6
TSPAN8-201ENST00000247829 KCNH8Q96L42 1107 aa11.28□□□□□ -0.6
TSPAN8-201ENST00000247829 MAP3K7O43318 606 aa11.26□□□□□ -0.61
TSPAN8-201ENST00000247829 EN1Q05925 392 aaPredicted RBP11.26□□□□□ -0.61
TSPAN8-201ENST00000247829 TSR1Q2NL82 804 aaKnown RBP11.25□□□□□ -0.61
TSPAN8-201ENST00000247829 COL9A1P20849 921 aa11.24□□□□□ -0.61
TSPAN8-201ENST00000247829 SPNS2Q8IVW8 549 aa11.24□□□□□ -0.61
TSPAN8-201ENST00000247829 TESPA1A2RU30 521 aaPredicted RBP11.23□□□□□ -0.61
TSPAN8-201ENST00000247829 PPP1R3GB7ZBB8 358 aa11.21□□□□□ -0.61
TSPAN8-201ENST00000247829 ADGRD1Q6QNK2 874 aa11.21□□□□□ -0.61
TSPAN8-201ENST00000247829 TK2O00142 265 aa11.2□□□□□ -0.62
TSPAN8-201ENST00000247829 ZBED2Q9BTP6 218 aa11.2□□□□□ -0.62
TSPAN8-201ENST00000247829 VPS9D1Q9Y2B5 631 aa11.2□□□□□ -0.62
TSPAN8-201ENST00000247829 LMOD2Q6P5Q4 547 aa11.19□□□□□ -0.62
TSPAN8-201ENST00000247829 SLC4A5Q9BY07 1137 aa11.18□□□□□ -0.62
TSPAN8-201ENST00000247829 PLSCR2Q9NRY7 297 aa11.18□□□□□ -0.62
TSPAN8-201ENST00000247829 SMYD5Q6GMV2 418 aa11.17□□□□□ -0.62
TSPAN8-201ENST00000247829 PROX2Q3B8N5 592 aa11.16□□□□□ -0.62
TSPAN8-201ENST00000247829 CDHR5Q9HBB8 845 aa11.16□□□□□ -0.62
TSPAN8-201ENST00000247829 HRO43593 1189 aa11.15□□□□□ -0.62
TSPAN8-201ENST00000247829 RBM26Q5T8P6 1007 aaKnown RBP11.15□□□□□ -0.62
TSPAN8-201ENST00000247829 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.15□□□□□ -0.62
TSPAN8-201ENST00000247829 NPDC1Q9NQX5 325 aaPredicted RBP11.14□□□□□ -0.63
TSPAN8-201ENST00000247829 NUTM2FA1L443 756 aa11.13□□□□□ -0.63
TSPAN8-201ENST00000247829 TULP1O00294 542 aaPredicted RBP11.13□□□□□ -0.63
TSPAN8-201ENST00000247829 MMRN1Q13201 1228 aa11.13□□□□□ -0.63
TSPAN8-201ENST00000247829 CERKQ8TCT0 537 aa11.12□□□□□ -0.63
TSPAN8-201ENST00000247829 BHMG1C9JSJ3 638 aaPredicted RBP11.11□□□□□ -0.63
TSPAN8-201ENST00000247829 KIAA1468Q9P260 1216 aa11.11□□□□□ -0.63
TSPAN8-201ENST00000247829 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
TSPAN8-201ENST00000247829 PRSS12P56730 875 aa11.1□□□□□ -0.63
TSPAN8-201ENST00000247829 CDCA7LQ96GN5 454 aa11.1□□□□□ -0.63
TSPAN8-201ENST00000247829 STAC3Q96MF2 364 aa11.1□□□□□ -0.63
TSPAN8-201ENST00000247829 MYT1LQ9UL68 1186 aa11.1□□□□□ -0.63
TSPAN8-201ENST00000247829 RABGEF1Q9UJ41 708 aa11.09□□□□□ -0.63
TSPAN8-201ENST00000247829 TSKSQ9UJT2 592 aa11.09□□□□□ -0.63
TSPAN8-201ENST00000247829 ONECUT3O60422 494 aaPredicted RBP11.08□□□□□ -0.64
TSPAN8-201ENST00000247829 PTGDRQ13258 359 aa11.08□□□□□ -0.64
TSPAN8-201ENST00000247829 FAM198AQ9UFP1 575 aa11.07□□□□□ -0.64
TSPAN8-201ENST00000247829 PACS2Q86VP3 889 aa11.05□□□□□ -0.64
TSPAN8-201ENST00000247829 MRPL50Q8N5N7 158 aaKnown RBP11.05□□□□□ -0.64
TSPAN8-201ENST00000247829 NBPF3Q9H094 633 aa11.04□□□□□ -0.64
TSPAN8-201ENST00000247829 FCHSD2O94868 740 aa11.03□□□□□ -0.64
TSPAN8-201ENST00000247829 PADI6Q6TGC4 694 aa11.03□□□□□ -0.64
TSPAN8-201ENST00000247829 TTC13Q8NBP0 860 aa11.02□□□□□ -0.65
TSPAN8-201ENST00000247829 RNF166Q96A37 237 aaPredicted RBP11.02□□□□□ -0.65
TSPAN8-201ENST00000247829 C3orf80F5H4A9 247 aa11.01□□□□□ -0.65
TSPAN8-201ENST00000247829 RBM27Q9P2N5 1060 aaKnown RBP11.01□□□□□ -0.65
TSPAN8-201ENST00000247829 SEPT9Q9UHD8 586 aaPredicted RBP11.01□□□□□ -0.65
TSPAN8-201ENST00000247829 SMAPO00193 183 aa11□□□□□ -0.65
TSPAN8-201ENST00000247829 ZC3H15Q8WU90 426 aaKnown RBP11□□□□□ -0.65
TSPAN8-201ENST00000247829 GOLGA8CPA6NN73 597 aa10.99□□□□□ -0.65
TSPAN8-201ENST00000247829 GPIHBP1Q8IV16 184 aa10.99□□□□□ -0.65
TSPAN8-201ENST00000247829 TATDN2Q93075 761 aa10.99□□□□□ -0.65
TSPAN8-201ENST00000247829 GPR37O15354 613 aa10.98□□□□□ -0.65
TSPAN8-201ENST00000247829 HIC1Q14526 733 aa10.98□□□□□ -0.65
TSPAN8-201ENST00000247829 TMEM132AQ24JP5 1023 aa10.98□□□□□ -0.65
TSPAN8-201ENST00000247829 NUDT18Q6ZVK8 323 aa10.98□□□□□ -0.65
TSPAN8-201ENST00000247829 LAPTM4BQ86VI4 370 aa10.98□□□□□ -0.65
TSPAN8-201ENST00000247829 KCTD12Q96CX2 325 aaKnown RBP10.98□□□□□ -0.65
TSPAN8-201ENST00000247829 PNMA3Q9UL41 463 aa10.97□□□□□ -0.65
TSPAN8-201ENST00000247829 FECHP22830 423 aa10.96□□□□□ -0.65
TSPAN8-201ENST00000247829 FAM98CQ17RN3 349 aaKnown RBP10.96□□□□□ -0.65
TSPAN8-201ENST00000247829 NBPF26B4DH59 902 aa10.95□□□□□ -0.66
TSPAN8-201ENST00000247829 GNPATO15228 680 aa10.95□□□□□ -0.66
TSPAN8-201ENST00000247829 FAM161AQ3B820 660 aa10.95□□□□□ -0.66
TSPAN8-201ENST00000247829 WNT2BQ93097 391 aa10.95□□□□□ -0.66
TSPAN8-201ENST00000247829 ZFRQ96KR1 1074 aaKnown RBP10.95□□□□□ -0.66
TSPAN8-201ENST00000247829 GTF3C3Q9Y5Q9 886 aa10.93□□□□□ -0.66
TSPAN8-201ENST00000247829 EYA1Q99502 592 aa10.92□□□□□ -0.66
TSPAN8-201ENST00000247829 ADGRG1Q9Y653 693 aa10.92□□□□□ -0.66
TSPAN8-201ENST00000247829 BRPF1P55201 1214 aaPredicted RBP10.91□□□□□ -0.66
TSPAN8-201ENST00000247829 ANKK1Q8NFD2 765 aa10.9□□□□□ -0.66
TSPAN8-201ENST00000247829 TIMELESSQ9UNS1 1208 aa10.9□□□□□ -0.66
TSPAN8-201ENST00000247829 THSD4Q6ZMP0 1018 aa10.89□□□□□ -0.67
TSPAN8-201ENST00000247829 BCAMP50895 628 aa10.88□□□□□ -0.67
TSPAN8-201ENST00000247829 PTPN5P54829 565 aa10.88□□□□□ -0.67
TSPAN8-201ENST00000247829 RBM46Q8TBY0 533 aaKnown RBP10.88□□□□□ -0.67
TSPAN8-201ENST00000247829 SLC24A3Q9HC58 644 aa10.88□□□□□ -0.67
TSPAN8-201ENST00000247829 SAMD7Q7Z3H4 446 aa10.87□□□□□ -0.67
TSPAN8-201ENST00000247829 HCSTQ9UBK5 93 aa10.87□□□□□ -0.67
TSPAN8-201ENST00000247829 SOWAHBA6NEL2 793 aa10.86□□□□□ -0.67
TSPAN8-201ENST00000247829 ZMYND10O75800 440 aa10.86□□□□□ -0.67
TSPAN8-201ENST00000247829 OATP04181 439 aa10.86□□□□□ -0.67
TSPAN8-201ENST00000247829 HDGFP51858 240 aaKnown RBP10.85□□□□□ -0.67
TSPAN8-201ENST00000247829 LRCH3Q96II8 777 aa10.85□□□□□ -0.67
TSPAN8-201ENST00000247829 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.85□□□□□ -0.67
TSPAN8-201ENST00000247829 NEUROD2Q15784 382 aa10.84□□□□□ -0.67
TSPAN8-201ENST00000247829 RCCD1A6NED2 376 aa10.83□□□□□ -0.68
TSPAN8-201ENST00000247829 METTL3Q86U44 580 aaKnown RBP10.83□□□□□ -0.68
TSPAN8-201ENST00000247829 PXYLP1Q8TE99 480 aa10.83□□□□□ -0.68
TSPAN8-201ENST00000247829 IRF6O14896 467 aa10.82□□□□□ -0.68
TSPAN8-201ENST00000247829 SWT1Q5T5J6 900 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms