RNA–Protein interactions for RNA: ENST00000238831.8

YIPF4-201, Transcript of Yip1 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF4, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-201ENST00000238831 AMOTL1Q8IY63 956 aa10.76□□□□□ -0.69
YIPF4-201ENST00000238831 DHX16O60231 1041 aaKnown RBP10.76□□□□□ -0.69
YIPF4-201ENST00000238831 FOXD4L6Q3SYB3 417 aaPredicted RBP10.76□□□□□ -0.69
YIPF4-201ENST00000238831 FOXD4L3Q6VB84 417 aaPredicted RBP10.76□□□□□ -0.69
YIPF4-201ENST00000238831 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.76□□□□□ -0.69
YIPF4-201ENST00000238831 CHMP4AQ9BY43 222 aa10.76□□□□□ -0.69
YIPF4-201ENST00000238831 KTN1Q86UP2 1357 aaKnown RBP10.76□□□□□ -0.69
YIPF4-201ENST00000238831 HDAC5Q9UQL6 1122 aa10.75□□□□□ -0.69
YIPF4-201ENST00000238831 FAM184AQ8NB25 1140 aa10.75□□□□□ -0.69
YIPF4-201ENST00000238831 SYTL4Q96C24 671 aaPredicted RBP10.75□□□□□ -0.69
YIPF4-201ENST00000238831 CCDC43Q96MW1 224 aaKnown RBP10.75□□□□□ -0.69
YIPF4-201ENST00000238831 DCAF8L1A6NGE4 600 aa10.75□□□□□ -0.69
YIPF4-201ENST00000238831 RILPL2Q969X0 211 aa10.74□□□□□ -0.69
YIPF4-201ENST00000238831 MCTP1Q6DN14 999 aa10.74□□□□□ -0.69
YIPF4-201ENST00000238831 VPS37DQ86XT2 251 aa10.74□□□□□ -0.69
YIPF4-201ENST00000238831 PHF14O94880 888 aa10.74□□□□□ -0.69
YIPF4-201ENST00000238831 TPM1P09493 284 aa10.74□□□□□ -0.69
YIPF4-201ENST00000238831 GOLGA3Q08378 1498 aa10.73□□□□□ -0.69
YIPF4-201ENST00000238831 SYNE3Q6ZMZ3 975 aa10.73□□□□□ -0.69
YIPF4-201ENST00000238831 KIF3AQ9Y496 699 aa10.73□□□□□ -0.69
YIPF4-201ENST00000238831 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.73□□□□□ -0.69
YIPF4-201ENST00000238831 CCDC146Q8IYE0 955 aa10.73□□□□□ -0.69
YIPF4-201ENST00000238831 ROCK2O75116 1388 aaKnown RBP10.73□□□□□ -0.69
YIPF4-201ENST00000238831 CCDC70Q6NSX1 233 aa10.73□□□□□ -0.69
YIPF4-201ENST00000238831 PMFBP1Q8TBY8 1022 aa10.72□□□□□ -0.69
YIPF4-201ENST00000238831 CLUAP1Q96AJ1 413 aa10.72□□□□□ -0.69
YIPF4-201ENST00000238831 GOLGA6L19H0YKK7 550 aa10.72□□□□□ -0.69
YIPF4-201ENST00000238831 APPP05067 770 aa10.72□□□□□ -0.69
YIPF4-201ENST00000238831 FOXD1Q16676 465 aa10.72□□□□□ -0.69
YIPF4-201ENST00000238831 RRP12Q5JTH9 1297 aaKnown RBP10.72□□□□□ -0.69
YIPF4-201ENST00000238831 GOLGA6L3A6NEY3 463 aa10.71□□□□□ -0.69
YIPF4-201ENST00000238831 C1orf141Q5JVX7 400 aa10.71□□□□□ -0.69
YIPF4-201ENST00000238831 RCAN3Q9UKA8 241 aa10.71□□□□□ -0.7
YIPF4-201ENST00000238831 ST18O60284 1047 aa10.7□□□□□ -0.7
YIPF4-201ENST00000238831 ODF2Q5BJF6 829 aa10.7□□□□□ -0.7
YIPF4-201ENST00000238831 CEP162Q5TB80 1403 aa10.7□□□□□ -0.7
YIPF4-201ENST00000238831 TCERG1O14776 1098 aaKnown RBP10.69□□□□□ -0.7
YIPF4-201ENST00000238831 PAF1Q8N7H5 531 aa10.69□□□□□ -0.7
YIPF4-201ENST00000238831 TRIM29Q14134 588 aa10.69□□□□□ -0.7
YIPF4-201ENST00000238831 CT47A1Q5JQC4 288 aaPredicted RBP10.69□□□□□ -0.7
YIPF4-201ENST00000238831 ZNF592Q92610 1267 aa10.69□□□□□ -0.7
YIPF4-201ENST00000238831 TERF2IPQ9NYB0 399 aa10.69□□□□□ -0.7
YIPF4-201ENST00000238831 BECN2A8MW95 431 aa10.68□□□□□ -0.7
YIPF4-201ENST00000238831 ZFYVE27Q5T4F4 411 aa10.68□□□□□ -0.7
YIPF4-201ENST00000238831 R3HCC1Q9Y3T6 440 aaKnown RBP10.68□□□□□ -0.7
YIPF4-201ENST00000238831 CALRP27797 417 aaKnown RBP10.68□□□□□ -0.7
YIPF4-201ENST00000238831 NAP1L1P55209 391 aaKnown RBP10.67□□□□□ -0.7
YIPF4-201ENST00000238831 KIF27Q86VH2 1401 aa10.67□□□□□ -0.7
YIPF4-201ENST00000238831 PKD2Q13563 968 aa10.67□□□□□ -0.7
YIPF4-201ENST00000238831 CCDC47Q96A33 483 aaKnown RBP10.67□□□□□ -0.7
YIPF4-201ENST00000238831 FYB1O15117 783 aa10.66□□□□□ -0.7
YIPF4-201ENST00000238831 IPO7O95373 1038 aaKnown RBP10.66□□□□□ -0.7
YIPF4-201ENST00000238831 FOSBP53539 338 aa10.66□□□□□ -0.7
YIPF4-201ENST00000238831 LMOD3Q0VAK6 560 aa10.66□□□□□ -0.7
YIPF4-201ENST00000238831 NECTIN2Q92692 538 aa10.66□□□□□ -0.7
YIPF4-201ENST00000238831 TMEM132AQ24JP5 1023 aa10.66□□□□□ -0.7
YIPF4-201ENST00000238831 TTC5Q8N0Z6 440 aa10.66□□□□□ -0.7
YIPF4-201ENST00000238831 NFXL1Q6ZNB6 911 aa10.65□□□□□ -0.7
YIPF4-201ENST00000238831 EIF3AQ14152 1382 aaKnown RBP10.65□□□□□ -0.7
YIPF4-201ENST00000238831 HSPA5P11021 654 aaKnown RBP10.65□□□□□ -0.7
YIPF4-201ENST00000238831 EIF2S2P20042 333 aaKnown RBP10.65□□□□□ -0.7
YIPF4-201ENST00000238831 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.65□□□□□ -0.7
YIPF4-201ENST00000238831 RBM33Q96EV2 1170 aaKnown RBP10.65□□□□□ -0.71
YIPF4-201ENST00000238831 GPS2Q13227 327 aa10.65□□□□□ -0.71
YIPF4-201ENST00000238831 CCAR1Q8IX12 1150 aaKnown RBP10.64□□□□□ -0.71
YIPF4-201ENST00000238831 ANKRD20A12PQ8NF67 263 aa10.64□□□□□ -0.71
YIPF4-201ENST00000238831 MTMR7Q9Y216 660 aa10.64□□□□□ -0.71
YIPF4-201ENST00000238831 ELL2O00472 640 aaPredicted RBP10.64□□□□□ -0.71
YIPF4-201ENST00000238831 PPP1R1BQ9UD71 204 aaPredicted RBP10.64□□□□□ -0.71
YIPF4-201ENST00000238831 LRRFIP1Q32MZ4 808 aaKnown RBP10.64□□□□□ -0.71
YIPF4-201ENST00000238831 RRP7AQ9Y3A4 280 aaKnown RBP10.64□□□□□ -0.71
YIPF4-201ENST00000238831 C9orf78Q9NZ63 289 aaPredicted RBP10.64□□□□□ -0.71
YIPF4-201ENST00000238831 CPLX2Q6PUV4 134 aaKnown RBP10.63□□□□□ -0.71
YIPF4-201ENST00000238831 EPS15P42566 896 aa10.63□□□□□ -0.71
YIPF4-201ENST00000238831 SLC4A3P48751 1232 aa10.63□□□□□ -0.71
YIPF4-201ENST00000238831 DIAPH3Q9NSV4 1193 aa10.63□□□□□ -0.71
YIPF4-201ENST00000238831 ANKRD45Q5TZF3 282 aa10.63□□□□□ -0.71
YIPF4-201ENST00000238831 HSP90AB2PQ58FF8 381 aa10.63□□□□□ -0.71
YIPF4-201ENST00000238831 IKQ13123 557 aaPredicted RBP10.63□□□□□ -0.71
YIPF4-201ENST00000238831 NEXNQ0ZGT2 675 aa10.63□□□□□ -0.71
YIPF4-201ENST00000238831 BAZ1BQ9UIG0 1483 aaKnown RBP10.63□□□□□ -0.71
YIPF4-201ENST00000238831 ERICH2A1L162 156 aa10.62□□□□□ -0.71
YIPF4-201ENST00000238831 CENPJQ9HC77 1338 aaPredicted RBP10.62□□□□□ -0.71
YIPF4-201ENST00000238831 CPLX1O14810 134 aa10.62□□□□□ -0.71
YIPF4-201ENST00000238831 TEFQ10587 303 aa10.62□□□□□ -0.71
YIPF4-201ENST00000238831 ANO2Q9NQ90 1003 aa10.62□□□□□ -0.71
YIPF4-201ENST00000238831 KIF3BO15066 747 aa10.62□□□□□ -0.71
YIPF4-201ENST00000238831 CCDC27Q2M243 656 aa10.61□□□□□ -0.71
YIPF4-201ENST00000238831 WWC2Q6AWC2 1192 aa10.61□□□□□ -0.71
YIPF4-201ENST00000238831 WASHC2CQ9Y4E1 1318 aa10.61□□□□□ -0.71
YIPF4-201ENST00000238831 TRDNQ13061 729 aa10.61□□□□□ -0.71
YIPF4-201ENST00000238831 BCL11BQ9C0K0 894 aaPredicted RBP10.61□□□□□ -0.71
YIPF4-201ENST00000238831 HOMER1Q86YM7 354 aa10.61□□□□□ -0.71
YIPF4-201ENST00000238831 HOOK1Q9UJC3 728 aaKnown RBP10.61□□□□□ -0.71
YIPF4-201ENST00000238831 ZNF771Q7L3S4 317 aaPredicted RBP10.61□□□□□ -0.71
YIPF4-201ENST00000238831 RUFY1Q96T51 708 aa10.6□□□□□ -0.71
YIPF4-201ENST00000238831 KDM4AO75164 1064 aa10.6□□□□□ -0.71
YIPF4-201ENST00000238831 RBM19Q9Y4C8 960 aaKnown RBP10.6□□□□□ -0.71
YIPF4-201ENST00000238831 CHMP4CQ96CF2 233 aa10.6□□□□□ -0.71
YIPF4-201ENST00000238831 TRAK1Q9UPV9 953 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms